Syngnathoides biaculeatus (alligator pipefish): 133504914
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Entry
133504914 CDS
T09681
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133504914 (vps53)
Membrane trafficking [BR:
sbia04131
]
Protein recycling
Others
EARP complex
133504914 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
133504914 (vps53)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
COG5_N
HAUS1
IFT74
Syndetin_C
COG3_N
Sec8_N
NBD94
Motif
Other DBs
NCBI-GeneID:
133504914
NCBI-ProteinID:
XP_061683639
LinkDB
All DBs
Position
8:complement(11426934..11462840)
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AA seq
834 aa
AA seq
DB search
MMEEEEFEFADDLEAILHLTPEVQLAIEQVFPSQDPLDKADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQVAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPSQGFKRPGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLIDYEE
KYGRMFPEEWCMTERIAVEFCHVTRAELSKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGSTLTDAPVKQRPESPLDPSNPFLEDDQGDDEGTQKDDKDEDLAKPRKPKAPDNPFH
GIISKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKVATDEGGAVLPSCADLFVYY
KKCMVQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSSSNSGVLTISSLLKEKEG
SETAKFTVDELCLICSILSTAEYCLATTQQLEEKLKEKVDKILVERINLTGEMDTFSTVI
SNSIQLLVQDLDAACDPGLTAMSKMPWQNVEHVGDQSPYVTSIIMHIKQNVPIIRDNLAS
TRKYFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVL
RKAPASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGL
KRGEQSSMLELFRQRLPTPPSGAEGGPSLSFSAPTPEQESSRIRKLEKLIKKRL
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaagaagaatttgaattcgccgatgatttggaggcaattttgcacctcacg
ccagaagtacaactagcgattgaacaggtgtttccaagtcaagatccgcttgataaagca
gacttcaacgctgtggaatacatcaacacattgtttcccaccgaacagtcccttgctaat
attgatgatgtggtaaacaagatacgtctgaaaataaggcgccttgatgacaacatcagg
acggtggtgagaggtcagaccaacgtggggcaggatggcaggcaggctttggaagaggcc
caagtagcaattcagcagctttttggaaaaatcaaagacatcaaggacaaggcagagaag
tctgaacaaatggtaaaggagattaccagggacataaaacagttagaccatgcaaagcgc
cacctcacgacatccatcaccacgctgaaccacctgcatatgttagcgggaggcgtggac
tctttagaggccatgaccagaaaaaggcagtacggtgaggtggccaatctcctgcaagga
gtggtaaacgttctcgaacacttccacaagtatatgggcataccacagatcagacagctc
tctgagagagtcaaagcagcccagagtgaattgggcacacagatcctggcagattttgaa
gaagcgttcccgtctcagggcttcaagaggcccggtgggccaagcaatgtgttaagggat
gcctgtctggttgcaaatgttctcgacccacgcatcaaacaggagataataaaaaagttc
attcggcagcatctctctgagtaccttgtgctctttcaggaaaaccaagatgttgcgtgg
ctcgacaagattgatcgccgctacgcctggatcaagcggcaactcattgactacgaggaa
aaatacggacgcatgtttccagaggagtggtgcatgacagaacgtatcgcagtggaattc
tgccacgtcaccagagctgagctttccaaagtaatgagaacacgagccaaggagatcgaa
gtgaagctgcttctatttgccattcagaggaccacaaacttcgaaggtctgctagcaaaa
cgtttcacaggaagcacattgactgatgcccccgtgaagcagaggccagagagtccttta
gacccatctaatcctttcttggaggatgatcaaggagatgatgagggtactcagaaagat
gacaaggatgaggatctggcaaagcccagaaaaccaaaggctcctgataatcctttccat
ggcatcatctccaagtgctttgagccccatctgtatgtctacatagaatctcaagacaag
aacctcggcgaattgatagacaggtttgtggctgacttccgagcacaaggcccacccaag
gtcgccaccgatgagggcggcgctgttctgccaagctgtgccgacctctttgtctattac
aagaagtgcatggtccagtgctcccagttgagcactggggagcccatgattgccctcacg
accatctttcagaaattcctgcgggagtatgcctggaagatcctctcaggcaacctgccc
aagtcaagcagtaacagcggggttctgacgatcagcagtctgctgaaggagaaggaaggc
tcggaaacggccaagttcaccgttgacgagctgtgcctcatctgtagcatcctgagtact
gcggagtactgccttgctaccacccaacagcttgaagagaaactaaaagagaaagtggat
aaaatcctggtggagagaattaatttgactggagagatggatacattcagcaccgtgatc
tctaatagtatccagctacttgtgcaagatctggatgccgcttgtgaccctggtctcact
gcaatgagcaagatgccgtggcagaatgtggagcatgtcggtgaccagagtccatatgtg
acttcaatcatcatgcacatcaagcagaatgtgccgatcatcagagacaatttggcctcc
acgcgcaaatatttcacgcaattctgcatcaaattcacaaactccttcatccctaaattt
atcaatcacttgttccgatgtaagcctatcagcatggtgggagcagaacaactcctcctg
gacacacactccttaaaaacagtcctcctagatctgccctccatcggttcccaggtgctt
cgcaaggcacctgccagctacactaagatcgtggtgaagggcatgacccgtgcagagatg
atacttaaggtggtgatggccccacatgaaccgcccgtggtgtttgtggataactacatc
aagctcttggccgacggcaatcctgagactttccagaaaatactcgacatgaagggttta
aaacgtggcgagcagagcagcatgctggagctcttcagacagaggttacccacaccgccc
tcgggggccgaaggcggcccctccttgtccttcagcgcccccacccctgagcaggagtcc
tcccgcatacgtaaactagaaaaactcatcaagaagagactgtga
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