Syngnathoides biaculeatus (alligator pipefish): 133505016
Help
Entry
133505016 CDS
T09681
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
133505016
Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
133505016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF_3
EGF
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_2
Motif
Other DBs
NCBI-GeneID:
133505016
NCBI-ProteinID:
XP_061683805
LinkDB
All DBs
Position
8:8993508..9019286
Genome browser
AA seq
1837 aa
AA seq
DB search
MRVLLLCVCTTTWMLSVHVSDGHRNRPTPREAGHGPGPGPRTRTRRPAEERRRHAGLVRP
EPPGKRRWGMCADPPAGLKTTTCVKRRCPPGCRGAPWCPKGVCAVPKATPPPANQLAPPA
WLSPESEDSGPNIAANFSTGAAKTTFLSLREAQAVLMKKMAAGRRDKMAAVLMKHIEKAK
KKPDVRTSFSGAGADTAAVVCRLLCKNGGVCLLKDRCLCPSNFTGKFCQIPVLSQPSSRA
PPSSSSSALNEVVKPPRLSVMAANAELTRSEFLLPLGGQNQDLAAGSAGASLVKVSVQHP
PEASVKVHQVTEVSGMVPAPRPLSSLSGSAGAPAPVRGDDIYAQHAGFKYCFREVKDGQC
SSPLSGLRSKEMCCRGPGKAWGSTQCALCPPHAGPNNNNSCPVGFQPGNGTKCLDVNECL
QPGLCDNGLCVNTAGSFSCVCKRGFILDASHGLCISQSVISQEKGQCHRVLGWGRGPSSC
SLPILRNITKQICCCSRVGKAWGPQCQRCPDFGSAAFKEICPAGPGYHYSASALQFSQRA
ADQLGARGAQLVTNGDKQHQDAATSSGANKSRQKPAAGLPSPPPPRPAVSLPPSRPVNAG
NAPRQEPQTPDRTGAQPSRPRPTAYSIRPPQQSGGGQSIDRNQGNFGTRDTSQSRGIVGN
QGSSQSRNTSRSQSSSQKQDTSRNLGTNQNQGTIRSQDTTRNQVSSQNPRISQNQGMAKN
EGSSQNQDATRNQGISQNRGTSRNQTSSQSQSAPQNRDTVRPQVTSQNQGISRSQIPNGK
QTNSGRQTTRVGGSTQISGGSQGTNQYQGSGRGQVTNQNQGSSRNQGGNDGSTQNQETSR
SPSTGQTQGLVAGRGESFPGPAPSIPKRDSSPGGDLPPLKRPQTTTQPPRVHYVNECVVS
GGVCDPGECVNTGAGYRCICPPGYKTTPRKTSCDDVDECEDPLVCPGQECVNSPGSYRCI
SCQPGFGLLNGLCTDIDECVGAPCSDGTCVNTPGSFRCLCRHGYKLHNFTCADVDECADP
SRCPGRMCVNSAGSYRCAPCRPGYALTDKHCTDVNECEDGGVCPGGQCVNTEGSYKCVDC
RQGYRSVNGLCEDVDECASASACEAARVCVNTVGSFRCDCLPGYRTFGWGPACRDIDECL
EENWCPPAGECVNTPGSYKCLCPQGYALGGDKKTCVDVNECARPDVCADGDCLNTDGSFA
CKCRRGFAGNPEGDACLDVDECVSSGGSLCRDSERCENTVGSYRCLASCEPGYRASAAGR
CEDVNECEDGSACGAHAVCQNVAGTYACVCDRGFAAAPDGNSCVDEDECASAPGVCGSAR
CRNLDGSFECECDTPGEKFQADGGRCASALQPETPPVRSPSSSLRTGSPGLETPAAPPPA
LPALPAPRPGELRDCYYNLDSSCNLLAANSTLQECCCTLGGGWGLGCVYRACPPAHAAEF
LSLCPSGRGYVTTGAATFSYTDVDECKRFHPEVCKNGVCVNNIPGYHCYCSSGFFYSAAL
LECVDVDECELELCGGGSCVNTAGSYYCSCPPPLVLDQTQQNCVNASHHSPDENLSVCWQ
TVSPDLMCQSPLLGAQVTFGDCCCLYGRGWGMECALCPQSDSEDLSRLCSSFPPAVFPDP
LGPQRGGGPAFSSPFIGDAFPPDLFPADSDYDDDFSPAADAFGPPTDDTYGGTGRFEDYD
GWRPRPPFRRLSPEPLPEDRADAPPLGPRGSPYEDERDSWGPGPPFPPYAGGDPRRLYER
RYDEYAGLSAAEDCGIADGCRNGTCVRTDRGFTCDCYRGYRLDAAAVTCADVNECDGGAA
VDFPCVNSRCVNTDGSFRCVCRRGYVMSRWPNRCVPA
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgctcctgctctgcgtgtgcacgacaacgtggatgctcagtgtgcacgtctcc
gacggacaccggaaccgacccacaccccgcgaagccggccacggccccggccccggcccg
cggacgcggacgcggaggccggcggaggagaggaggcggcacgcgggactcgtccgaccg
gagccgcccgggaagcgcagatggggcatgtgtgcagatccgccggcggggctgaagacc
accacgtgtgtcaaacggcgttgcccccccggttgccgcggcgccccctggtgtcccaaa
ggcgtctgcgcggttcccaaggcgacgccgccgcctgccaatcagctcgccccgcccgct
tggttgagtcccgaatcggaggactccggaccgaatattgccgctaatttttcgacggga
gcggcaaaaacgacttttctaagtctgcgcgaggctcaggccgtccttatgaagaagatg
gcggcaggaaggagagacaagatggccgccgttctgatgaagcatatcgagaaggcgaag
aagaagccggacgtccgcacgtcgttttctggcgccggcgccgacacggccgcagttgtg
tgtcgtctgctgtgtaagaacggaggtgtgtgtctgctgaaggatcgatgcctgtgcccc
tccaactttaccggaaagttctgccagatccccgtcttgtctcagccttcctcgcgagcc
ccgccctcctcctcctcctccgcactcaatgaggtcgtcaagcccccccgcctgtctgtc
atggcggccaacgcggaactgacccggtctgagttcctgctgccgttggggggtcaaaac
caggacttagcagcgggaagcgccggagcatccctggtgaaggtgagcgttcagcacccc
cccgaggccagcgtgaaggtccaccaggtgaccgaggtgtcaggaatggtcccggcgccg
cggccgctctcctcgctgtccgggtccgcgggggctccggcgccggtgcggggcgacgac
atttatgcccaacacgccggcttcaagtactgcttcagagaggtcaaagacggacagtgc
agttctcctctgtcgggcctgcggagcaaagagatgtgctgccgaggtccgggaaaggcc
tggggctccacccaatgcgccctctgccctccgcacgcaggtccaaacaacaacaacagc
tgtcctgtcggcttccaaccaggcaacggaacaaaatgcctcgacgtgaacgagtgcctg
cagcccggcctttgcgacaacggcctgtgcgtgaacacggcggggagcttcagttgcgtt
tgcaagcgcggcttcatcctggacgcctcgcacggactctgcatctcccagagcgtgata
tcacaggagaagggtcagtgccaccgggtcctgggttggggtcggggcccgtcctcctgc
tcgctgcccatcctcaggaacatcaccaagcagatctgttgctgcagccgggtgggcaag
gcctggggaccccaatgccagcgctgccccgacttcggctcggcggctttcaaggagatc
tgtcctgccggtccgggctaccattactccgcctccgccctgcagttcagccagagagct
gctgatcaactgggcgcccgaggagcgcagctggtaaccaacggcgacaaacaacatcag
gatgccgctacttctagtggagctaacaagtcccggcagaaacccgccgccggcttaccc
agtccgcctccacctcgcccagctgtcagcctgccgccatcgagacctgtcaacgctggc
aacgctccccgccaggaacctcaaactccggaccggaccggagcccagccgagccgacca
agaccaaccgcctattctatcagaccgccgcaacagtccggcggtggtcaaagtattgat
cgaaaccaaggaaactttgggactcgtgacacgagtcagagccgaggcatcgtcgggaat
caaggctcgagtcagagtcgaaacactagtagaagccaaagctcaagccagaaacaagac
actagcaggaacctaggcaccaaccagaaccaaggcacaattaggagtcaagacactacc
aggaaccaagtcagcagtcagaacccaagaatcagccaaaaccaaggtatggccaagaac
gagggctcaagtcagaaccaagacgcgaccaggaatcaaggcatcagccaaaaccgcggc
acatccagaaaccaaacctcaagtcagagccaaagcgctccccagaaccgagacactgtc
cgaccacaagtaacgagtcagaaccaagggattagcagaagccaaattcccaatgggaag
cagaccaacagtgggaggcaaaccacaagagttggcggaagcacccaaatctccggcggt
agtcaaggcaccaatcagtatcaaggcagcggcagaggtcaagtcaccaaccaaaaccaa
ggctccagcaggaaccaaggtgggaatgacggttctactcagaaccaagaaacaagcagg
agtcccagtaccggccaaacccaaggtctggtggcaggaagaggcgagtcctttccagga
cctgctccatcgatccccaagcgagattccagtcccggtggtgatctcccacctctcaag
aggccgcagactaccacgcagccacctcgagtccattatgtgaatgagtgtgttgtgtca
ggaggtgtgtgtgatccaggtgagtgtgtgaacactggagccggctaccgatgtatttgc
ccacccggatacaagactaccccacggaagaccagctgtgacgacgtagacgagtgcgag
gatccgttggtttgtcccggtcaggaatgcgtcaacagtcccgggtcgtaccgttgcatc
tcctgtcagcccggattcggacttctcaacggactgtgcacagacattgacgagtgcgtt
ggagctccgtgctccgacgggacctgcgtaaacacgcccggaagcttccggtgcctctgt
cgccatggttacaagctccacaacttcacctgcgcagacgtggacgagtgcgcggatccg
tctcggtgtcccggtcggatgtgcgtcaactctgcgggctcgtatcgttgtgcgccgtgc
cgcccggggtacgcgctgaccgacaaacattgcacagacgtgaacgagtgcgaggatggc
ggagtgtgtcccggtgggcagtgtgtcaacaccgagggctcctacaagtgcgtggactgt
cgccaaggttaccgatcggtcaacggactgtgtgaagacgtggacgagtgcgcaagtgcg
tccgcttgcgaggccgcgcgggtgtgcgtcaacaccgtcggctcgttccgctgcgactgc
ctcccggggtatcgaaccttcggttgggggccagcgtgcagagatattgacgagtgcttg
gaggagaactggtgcccccccgcaggagaatgcgtcaacacgccgggctcgtacaagtgt
ttgtgtcctcaaggctacgcgctcggcggcgacaaaaagacctgcgtcgacgtgaacgag
tgcgcgaggcccgacgtgtgcgcggacggcgactgcttgaacaccgacggctccttcgcc
tgcaaatgtcggcgcgggttcgccggcaacccggagggcgacgcctgcctcgacgtggac
gagtgcgtgtcgtccggcggttccctttgccgagactccgagcggtgcgagaacaccgtg
ggctcgtaccgctgcctcgcttcctgcgagccgggataccgggcctcggccgccggacgc
tgcgaagacgtgaacgagtgcgaggacggatcggcgtgcggggcgcacgccgtctgtcag
aacgtcgccggaacgtacgcgtgcgtgtgcgaccgaggcttcgccgccgcgccggacggg
aactcctgcgtggacgaggacgagtgcgcgtccgcgccgggcgtgtgcggttccgctcgc
tgccgcaacctggacggatcgttcgagtgcgagtgcgacacgccgggagaaaagtttcaa
gcggacggcgggcgctgtgcgagcgcgctccagccagagactccccccgtccgctctccg
tcgtcgtccctccgcacgggcagcccggggctcgaaacgccggccgcgccgcccccggcc
ctcccggccctcccggccccccgccccggcgagctgagggactgctactacaacctggac
tcgtcgtgcaacctcctggccgccaacagcaccctgcaggagtgctgctgcacgctgggg
gggggctggggcctgggctgcgtctaccgggcctgcccccccgcccacgcggccgagttc
ctgtcgctgtgtcccagcgggagaggatacgtcaccactggggcggcgaccttcagctac
acagatgtggacgagtgtaagcgcttccatcccgaggtgtgcaagaacggcgtctgcgtc
aacaacattccgggataccactgttactgctccagcgggttcttttacagcgccgcgctg
ctcgagtgtgtcgacgtggacgagtgcgagctggagctgtgcggcgggggctcgtgcgtc
aacacggcgggctcgtattattgcagctgcccgccgcctctcgtgctggaccagacgcag
cagaactgcgtcaacgcctcccaccacagcccggatgagaacctgtcggtgtgctggcag
acggtgagccccgatctgatgtgccagagcccccttttgggggcgcaggtcaccttcggc
gactgctgctgcctctacggccgaggctggggcatggagtgtgcgctctgcccgcagagc
gactcggaggacttgagcaggctgtgcagctcgttccctccggccgtcttcccggacccg
ctgggaccgcaaagaggcggaggccccgccttctcctcgccgttcatcggcgacgccttc
ccgccggaccttttccccgccgactccgattacgacgacgacttctctccggcggcagac
gctttcggcccgcctacggacgacacctacgggggaaccggacgcttcgaagactacgac
gggtggcggccgcggccgccgttccgccgtctgtccccggagccgcttccggaggaccgg
gcggacgcgccccctctcgggcccaggggatctccttacgaggacgagcgggactcttgg
ggacccggaccgccgttccccccttatgcgggaggcgaccccaggagactttacgagcgg
cgctacgacgagtacgccggcctgagcgcggcggaggattgcgggatcgcggacggctgc
cggaacgggacgtgcgtccgcacggaccggggcttcacctgcgactgttaccgtggttac
cggctggacgccgccgccgtcacgtgcgcggacgtgaacgagtgcgacggcggcgcggcc
gtggacttcccgtgcgtgaactcgcgctgcgtcaacacggacggttcgttccgatgcgtg
tgtcgtcgcggctacgtcatgtcgcgctggcccaaccgctgcgtgcccgcctag
DBGET
integrated database retrieval system
