Syngnathoides biaculeatus (alligator pipefish): 133505023
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Entry
133505023 CDS
T09681
Symbol
capns1b
Name
(RefSeq) calpain small subunit 1b
KO
K08583
calpain, small subunit 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbia01002
]
133505023 (capns1b)
Peptidases and inhibitors [BR:
sbia01002
]
Cysteine peptidases
Family C2: calpain family
133505023 (capns1b)
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Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_7
EF-hand_1
CAPN13-like_C_EFh
EF-hand_8
EF-hand_5
Gag_FV_central
Motif
Other DBs
NCBI-GeneID:
133505023
NCBI-ProteinID:
XP_061683851
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Position
8:complement(9024757..9030592)
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AA seq
216 aa
AA seq
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MSFVKSFIGGILNVVSNIDPAIFMPSDPPPPRRPLAFEEAHENDEEKAFRRAFKKLAGDD
MEVNPKELMNILNQVLTKHGNLKTDGFSIESCRSMVAVMDSDSTGKLGFHEFKYMWNNIK
RWQGIYVSHDKDGSGVICGNELSRAFKAAGFPLNEQLHKMIIRRYSDEHGDMDFDNFIGC
LVRLDAMCRAFKTLDKGNSGSISLDVKEWLQLTMYS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgtaaaatccttcatcggtggcatcctgaatgtcgtcagcaacatcgatccg
gccatcttcatgccctccgatccaccgccgccccgacgacccctggccttcgaggaagct
cacgagaacgacgaggagaaagccttccgcagagccttcaagaagctggccggagacgac
atggaggtgaaccccaaagagttgatgaacatcctcaaccaagttctcaccaagcatgga
aatctgaagactgacggcttcagcatcgaatcgtgcagaagcatggtggccgtcatggac
agcgacagcacgggcaagctgggcttccacgagttcaagtacatgtggaacaacatcaag
agatggcagggcatctacgtgtcccacgacaaggacgggtcgggcgtcatctgcggcaac
gaactctcgcgcgccttcaaggccgcaggcttccccctcaacgagcagctgcacaagatg
atcatccgccgctacagcgacgagcacggcgacatggactttgacaacttcatcgggtgc
ctggtgcgactggacgccatgtgcagagccttcaagactctggataaaggaaacagcggc
tccatcagcctggacgtcaaagagtggcttcagctgaccatgtactcgtga
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