Syngnathoides biaculeatus (alligator pipefish): 133505221
Help
Entry
133505221 CDS
T09681
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133505221 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133505221 (trip12)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133505221 (trip12)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
HECT type E3
133505221 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
M-HEAT_ATR
Motif
Other DBs
NCBI-GeneID:
133505221
NCBI-ProteinID:
XP_061684230
LinkDB
All DBs
Position
8:complement(20370384..20400940)
Genome browser
AA seq
2055 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDQTVAGRLQSEQVKQKANSLPESRRPIAKASKAT
SSSATGQSRGHSSKRSLALSVASFVLQDDPEVAGTSEQERKSHPAKSEGTRGLKRSEAPD
QISTLGLTATKKPRSLSLPRDHTSETRKGPAKRKSLAAEAPASSGRGQSKKSGAAGVSPV
QKRKKTDSHPVLSSTIVSLPNRTEGRTVKPTKLASKSAASAKAGCSNVTDSSSSASTSSS
SSTTGTNSATTPGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKSASSSKFEWATRF
NPKVNLPKPKLSLTGSSKTETSKPGPSGLQAKLARLRESTKKRSESPPAELPSFRRSTRQ
KTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGASASSSV
TGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASSKAQ
QLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMN
HASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKAILQ
AGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLAHQDKKSV
ESTCLCFARLVDNFQHEENLLQEVASRDLLTNIQQLLVVTPPILSSGMFIMVVRMFSLMC
SNCPCLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICELMPCLP
REGIFAVDVMLKKGSAQTTEGVIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISLSTL
GRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNSGSHPEVRREDARAQLMKEDPELAK
CFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIASMLS
SQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLAESESFLVTSPPKACPSTS
TSLCTTTISTASTTTVNNATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPRR
PKYSPPRDDEKVDNQAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNSNSEASRTAGVSG
LARAPPKDSISNNRDKIKAWIKEQASKFVERYFNSEKVDGSNPALNVLQRLCTATEQLNL
QVDGGLECLSEISSIVSESDVSSFEIQHSGLVKQLLLYLTSHTDRDLLSRDLRLKRFLHV
FVGCPIPGTEPVNCLDPIENGPFLALVHKMNSCLSQMEQFPVKVHDFPSGNGNGSRGSQA
LKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDS
DDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEEREST
DDEANPLGRAGIWTKTHTIWYKPVREDEDSSKDTVGGKRGRAQTAPTKTSPRNAKKQDEL
WHDGVCPTVINPLETYLTSDPPESITFDDPSLDVNLLLRVLHSISRYWFYLYENALCKEI
ISTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTRQMLFYVTAFD
RDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRAMLE
IQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLTNPKGSQEGTKYMFSTRGLF
AVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHEMSINSHD
LVNIDPDVAKSILHLEDIIRQKKRLEQDRSQTRETLQQALESLNMNGCSVEDLGLDFTLP
GFPNIELKKGGKDVPVTIYNLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLNHLQYF
YPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLFLQF
VTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDEFLPSVMTCVNYLKLPDYSSIEIMREK
LLTAAREGQQSFHLS
NT seq
6168 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccaaacagtcgcaggaaggttgcagtcagaacaggtcaaa
caaaaagcaaattccctacctgaaagtagaaggcctatagcgaaggcttccaaagctaca
agcagctcagccactggccagtccagagggcacagctcaaaaagaagccttgctctctcg
gtggcatcgtttgtattgcaagacgacccagaggttgcagggacatctgaacaagaacga
aaaagccatccggctaagagtgaaggtacccgaggacttaagcgaagtgaagctccggac
caaattagcaccttaggattgaccgcaacaaaaaagcccagatccctgtccttacccaga
gatcatacctcagagaccaggaaaggcccagctaagaggaagtcacttgctgcagaagca
cctgcatcatcaggtagaggacaaagtaagaaaagtggagctgctggggtttcaccagtc
cagaaacggaagaaaacagattctcaccctgttctaagtagcaccatcgtatccctcccc
aatcgtaccgagggcagaactgttaaacccaccaagctggcgtctaaatcagccgcctca
gccaaagctgggtgcagcaacgtgacagactcctcctcttctgcctcaacgtcctcctcg
tcttctacaacaggcacaaacagtgctaccacgccaggtgccagagtcaaacaaggcaaa
gaccagacgaaggcacgccgctctcgttccgcctcaagcccctctcctcgccgtagtaca
cgtgacaaggaacaggcaaagtctgccagctcttcaaagtttgagtgggccacacgcttc
aacccgaaagtcaacctgccaaaacccaaactgtctttaactggatcatccaaaactgag
acctccaaaccagggccgtctggattacaagcgaaactagcacgtttgagagaatccacc
aaaaagcgcagcgagtctcctccagcagagctccccagctttcggcggagcacacgccag
aagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctgggcaagcgtggg
gcagctgacgctcgccgacaggagaaaatggctgactctgacaataaccaggatggggct
aactcctcggctgctcgcactgatgaggcatcacagggcgcctcagcctcaagttcagtt
actggagcagtaggcatgaccacctctggagaaagtgaatctgatgactcagaaatgggg
aggcttcaagctttactagaggccaggggtctgcccccacatctatttgggcccctggga
ccccggatgtcacagctgtttcacaggaccataggcagtggtgccagctccaaggctcag
cagttactacaaggcctgcaggccacaggtgatgagtctcagcagctccaagctgctatt
gagatgtgccagctattggtaatgggcaatgaagaaacactcggtggattccctgtcaaa
agtgtggtgcctgctttgattacactgttgcaaatggagcataactttgatattatgaat
catgcctcccgtgcgctcacttacatgatggaggcccttcctcggtcttctgctgtggtg
gttgatgctattcctgtattcctggagaagcttcaggtgatccagtttattgacgtagct
gagcaggcccttaccgccttggagatgctgtcgaggcgacacagcaaagcaattttgcag
gctggtgggctggctgactgcctactctacctagaattcttcagcatcaatgcacagagg
aatgccttggccatagcagccaactgctgccagagcataacacctgatgagttccacttt
gttgctgattctctgcctctgttgactcagagacttgcacatcaggacaaaaaatctgtt
gagagcacttgcctctgttttgccagactagtggacaattttcaacatgaggagaacttg
ttgcaagaagtggcatcacgagaccttttgaccaacattcagcagctgctggtagtgaca
cctcctatacttagctctgggatgttcatcatggttgtgcgcatgttttccctcatgtgt
tccaactgcccctgcttggcagttcagctcatgaaacaaaacattgcagaaacactgcgc
ttcctcttgtgtggggcatcaaatggcagctgccaagaacagattgaacttgtaccacgt
agccctcaagaactctacgaactgacttctcttatatgtgagctgatgccttgcctgcct
cgagagggcatctttgcagttgatgtaatgctgaagaagggcagtgcccaaacaactgaa
ggggtgatttggcaatggagggatgatagagggctgtggcatccctacaatcgcattgac
agccgcattattgagacagcccaccagaatggggaagatgagatcagcttgtcaactctg
ggtcgtgtgtatacaattgactttaactctatgcagcagatcaacgaagacaccggaaca
gcacgcggcatccagaggaagccaaatccacttgcaaatcccaactctgggagtcacccg
gaggttcgacgagaagatgcacgagcccagttgatgaaggaagaccctgagttggctaag
tgttttatcaaaactctatttggggtcttgtatgaagtgtacagctcctctgctggacct
gcagttagacacaagtgccttagagccatcctcaggatcatttactttgctgacgcagag
ctgctgaaggatgtcttaaggaaccatgcagtgtccagtcacattgcctccatgctatcc
agccaggacctgaagattgtagtgggttctttgcagatggctgagatcctaatgcagaag
ctgcctgatgtgttcagtgtctatttcaggagagaaggtgtaatgcatcaggttaaaaac
cttgcagagtctgagagctttctagttactagtccccccaaggcttgccccagtactagt
accagtctgtgtactaccaccatcagcactgcatccacgacgaccgtcaataatgcaact
cctgacttgggttctcctagcttccagcatagcatggatgactcacttgacctcagccca
caaggaaggttaagcgatgtgctcaaacgaaaacgactaccgaaacgggggcccagaagg
cccaaatactcaccaccaagggatgatgagaaagtagacaatcaggcaaaaagccccaca
agtactcagtcacccaaatcatccttcttggccagtctcaatcccaaaacgtggggaaaa
ctcggggcccaaacaaataattccaactctgaggcttcacgtacagctggggtgagtggc
ctggcaagggcaccccccaaagactcaatttcaaataacagagacaaaatcaaggcctgg
atcaaagaacaggccagtaagtttgtcgagcggtacttcaactctgaaaaggtggatggc
agcaaccctgcactgaatgtacttcagagactttgcacagccactgagcagctcaatctg
caggtggatggtggtttggagtgtctttcggagatttccagtattgtgtcagagtctgat
gtgtcatcgtttgagatccaacacagtggactagtaaagcaactcctgctttacctaacc
tcccacacagacagggatttgcttagtcgggacttgcgactgaaacggttcctccatgtc
tttgttggctgcccgattccaggaacagagcctgtaaattgtctggacccaatagaaaat
gggcctttcctggcactggttcacaaaatgaacagctgtttgagtcaaatggagcagttc
cctgtcaaagtgcatgatttccccagtgggaatggcaatggtagcagaggttcacaggca
cttaagttcttcaacacgcatcagctcaagtgtcagctgcagaggcatccagactgcact
aatgtcaaacagtggaaaggtggccctgtaaagatagaccctctagccctggtgcaagcc
attgagcgataccttgttgtcagagggtatgggcggatcagagaagaggatgaagatagt
gatgatgatggttcggacgatgaaatagatgagtcactggctgcccagttcctaaattca
ggcagtgtacgccatagattacagttctacattggtgaccacttgctgccgtacaacatg
acagtttaccaggctgtgcgacagtacagtcttcaggcagaagaagaaagggagtccacc
gatgatgaggcaaacccacttggccgagcaggcatctggaccaaaacgcacacaatatgg
tataaacccgttagagaggatgaggatagcagcaaagacactgtggggggcaagcggggc
cgagctcagactgcgcccacaaaaacctcccctcgcaatgccaagaagcaggatgagctg
tggcatgatggtgtgtgtcccaccgtcatcaatcccttagagacatacctcacttcagat
cctccagagagcataacctttgatgacccctccttagatgtgaacctgctgctgcgggtt
ttgcactcaattagtagatattggttctacttgtatgagaatgctctgtgtaaggaaatc
atctccactagtgagttcattaacagtaagctgactgccaaagccaaccgtcagcttcaa
gaccccctcgttattatgacagggaacatcccaacgtggctcatcgagcttggaaagact
tgccccttcttcttcccctttgatacgcgacagatgttgttctatgtaactgcttttgat
cgcgaccgagccatgcagcgcttgctggacacaaaccccgagattaaccaatcagattct
caggacagcagagttgcaccgcgtcttgacaggaaaaagaggacgataaatcgtgatgag
ctgctcaaacaggcggagtccgtgatgcaggatcttggtagctcccgtgccatgttggag
attcagtatgagaacgaggtgggtacaggtcttggtcccactctggagttctacgctcta
gtttctcaggagctccagcgggctgaccttggcttgtggaggggggaagaggtgactttg
accaatcctaaaggaagccaagagggaacaaaatacatgttcagtaccagaggactcttt
gcagttccatttggcaggacaaccaaaccagcacatatagccaaaatcaaaatgaagttc
cgcttcttggggaagctaatggccaaagctatcatggacttcagactgctggacctgcca
ctggggctgccattttataagtggatgttgcggcatgagatgtccataaactcccatgat
ttggtcaacattgatcctgatgttgcaaaatccattttgcacttggaagatattattcgc
cagaagaagaggcttgaacaagatcgctcgcagacgagggaaacgttacagcaggcgttg
gagagcctcaatatgaacggctgctcagtggaggacctgggtttggatttcacactccca
ggattccccaacattgaactgaaaaagggtggaaaagatgtacctgtcacgatctacaac
cttgaggagtacctcaggttggtggtgtactggactctcaatgaaggagtatcaagacag
tttgaatcttttagggaaggctttgagtccgttttccccctcaatcacttgcagtatttc
tatccggaagagcttgaccagttgctgtgtggcagtaaatcggagacgtgggatgtcaag
acgctgatggagtgctgtcgaccagatcacggctacacacacgacagccgggctgtgcgg
ttcctatttgaagtgttgagcagcttcgacgctgagcagcagagactttttctgcagttt
gtcactggaagcccgagactccctgttggaggtttccgcagcctgaacccccctctgaca
attgtgaggaagacattcgagtcgacggagaacccagatgagttcctcccttcagttatg
acctgtgtcaactacctgaagctgcctgactactccagcattgagatcatgcgagagaaa
ctgttaacggcagctcgagagggccaacagtcgttccacctttcctga
DBGET
integrated database retrieval system
