Syngnathoides biaculeatus (alligator pipefish): 133505333
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Entry
133505333 CDS
T09681
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133505333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133505333
Membrane trafficking [BR:
sbia04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
133505333
Endosome - Golgi transport
Arf GTPase associated proteins
133505333
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
133505333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
SAM_1
RA
PH_11
SAM_2
PH_6
PH_3
PH_8
PH_9
Motif
Other DBs
NCBI-GeneID:
133505333
NCBI-ProteinID:
XP_061684468
LinkDB
All DBs
Position
8:6724577..6790103
Genome browser
AA seq
1610 aa
AA seq
DB search
MSQPESEVTVWDWLSGLRLEQYSKAFEVAGLSTLAECHNLTPGRLEQMGIALPGHRRRIL
ASLNKSRDVASPQMNSQSIFGLATRAEQEQPLEENGPLTGRASSGQQEKHFPNEAEKENA
RDPELVPGEREKPVPRDRQVSRMKEETGGQGRLATLEHKEEDATAEKQRPVPKERTRFRS
SAPVLSSSPPSSLTHPFCDTSLPPVPPRSTLNCPPQRFTLALTYSAPAQNSTSPQGAESV
IKEAAFRVHSTPHTLTQDPTQETVRQPRAPHPQTQPHSLSVDFHAQDSRSDTTATLSPVT
VSGSPKEERNAPPLPPKTGSAPRGPPKIPSRHPLLPSRIENPPRSKADELLQDQSPTVPP
RIVTSQTQEVMQQSSRPAPQAARPPPGVPHLPPQTTLCPADDDSDDYEEADASYASILPV
NPLDREMSLQVPLQAKGRYSSLCSDDELLGDDEPSVWEEPGLSDLQASIFLPNAGRLASA
PKEGSSHLAAVIKMGWLDKNPPQGALYYQRRWVKLDVDYLRYFDNDKQVYSKGIIPTASI
TNVTSVGELKFEVITSNRTFIFKAESDAERKEWVTVLQDCTRGRQRRSTLSPGSPLIPEF
KGYLELKGLRSKLYTVVTSDKVFLYKNMEDYRVGVGITSIEMNVGNVKVTDRRGFDLTTP
YRIFSFVAESEQLKDQWVDAMRESIDEALSNREVADRIWAEPSNSFCADCGTPKPEWAAI
NLCVVVCKRCAGEHRGLGPNISKVRSLKMDRKVWTQELIQVFSSLGNDRVNGFWAANVPP
SEALSPSSCSDDRRRFITNKYRHGKYRKYHPLYGNQKELNNALCINVQCSDVLETLSLIF
CGADVNCSTGMASCPTPLSLANTHAQPLQAVLLSHNLNTALPQSEVESGMDEVHFPAPTC
VYHNGFLFKTGSMARPVTERKAREEFSRRWCTLNEGTFSYYESDKNSNPNGALRASEIVC
LAVDVPDKHGYEHTFELYSESDRLYLFGTDDPNGHKEWIKSIAKSVIPARAEPLLRLSFE
RIGRLKCKDGLNLQTSKVGWFALVGSTLHAYLNDSREEEIRLRKLNELSIQQDNGVLVLV
ERGRTLYIEGERKLDFAGWCAAIQSAAGSGGDTLSQQQLTDTDIPVVVHSCVDYITQCGL
TSEGIYRKSGVNSRVAALCERFRRDARSLRLKEGEHQVDDVSNTLKRFFRELEEGLFTSE
DGGTWLTTAAIQDESVKISQYQKLLNKLPRVNRATLRALINHLYCVQRFSELNQMNLHNL
AIVFGPTLFQTDGQDYTAGRAIEDLIQYYTLVFEVDEQQLKKQLEEITVIIQVREKLNTK
FPSTEPGGHFICTVYLEEKKDTAEQHVKIPASMTSAELTCEILDRRNIPVKDKEYWNCWE
VVDKEEMERPLHYRERVLPILHSFGTDSHLLIKKHVAMEAMIIYLASKVDPSKHGMMKFR
EERSILGLGLSSGSFHDRYFILNSSSLRMYKEVRSNRPERDWPVKNLRVYLGIKKKVRPP
TCWGLTVVYESKKQDKPERQQWYLCCETQPEMREWYATFHSIQNDGDVWPQDGLQPSRAS
RAPPDSRHGNVSLIPLRGSENEMRNSVAAFSQDPLAGRCSASSGDLAALR
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccggagtctgaagtcactgtgtgggactggttaagtggtcttcgcctcgaa
cagtattccaaagcatttgaagttgcaggcctgtccactttagcagaatgccataacctc
acaccaggtcggctggagcagatgggaatagcgcttccgggccaccggagacgcatcctg
gccagtctgaacaaaagtcgcgatgtcgcctctccgcaaatgaactcgcagtccatcttt
ggactggccacgagagcagagcaagagcaaccgttggaggagaatggacctttgaccggt
agagcgagttccggacagcaggaaaaacattttccgaacgaggctgagaaagaaaacgca
cgggacccggaactcgtacccggagagagagagaaaccagtcccgagggatagacaagtg
tcaaggatgaaggaggaaactggagggcaagggaggctggcaactcttgagcataaggaa
gaggatgcaactgcagagaaacagaggccagtcccaaaagagaggacaaggtttcgctcc
agtgctccagtcctatccagttctccacccagctccctcactcacccattttgcgacacc
tctttgccgccggtgcccccacggagtactttgaactgcccaccgcaacgtttcacgttg
gctttgacgtactcagccccggcacagaactccacctcacctcaaggcgcagaatctgtc
atcaaggaggcagcatttcgggttcactctacgccccacaccttaacccaggaccccaca
caagaaactgtccgccaacctcgggccccccacccccaaactcagcctcattcgttatcc
gttgatttccacgcccaagattcaagaagcgatacgacggcaacgttgtcccccgtgacc
gtctccggttcccccaaggaagagagaaacgctccacctctccctccaaaaactgggtca
gcaccaagaggcccaccaaaaattccaagtaggcaccctctgctgccttccagaattgag
aacccccctcgtagcaaggctgatgaacttcttcaagaccaatctccaaccgttccacct
cgtatcgtgacttctcaaactcaagaggtcatgcagcagtcgagccgacctgccccccaa
gcggcccggcctcctccgggtgtcccccaccttcctcctcagacaacgctgtgcccagca
gatgacgattcggacgactacgaagaggccgacgcatcttacgccagcattcttccggtg
aacccattagaccgggaaatgtccctacaagtgcctcttcaagcaaaaggccggtacagt
tctttatgcagcgatgacgagctattaggcgacgacgagccgagcgtttgggaagaaccg
ggcctgagcgacctgcaagcgagcatctttctgcccaacgctggcagactggcatcagcc
ccgaaagaaggcagctcccacctcgccgccgtcatcaagatgggctggctcgacaagaac
ccaccgcaaggggccctttactatcagaggcggtgggtcaagctcgacgttgactacctg
cgatacttcgacaacgacaagcaagtctattccaagggaatcattccgaccgcatcgata
acgaacgtgacgagcgttggggagctgaaatttgaggtcatcacaagcaatcggacgttt
atcttcaaggccgaaagtgacgctgagagaaaggagtgggtgactgtgctgcaggactgc
acaagggggcgccagagacgcagtaccttaagccccggttcacctttgattccggagttc
aaaggctatttggagctcaaaggtctccgctcgaaactttatacagttgtgacttcagat
aaggtcttcctctacaaaaacatggaggactaccgagttggagtgggtatcacgtcgatc
gagatgaatgtcggaaatgtcaaagtcacggatcgccgcggctttgatctcaccacgccg
taccggattttcagtttcgtagcagagtccgagcagctgaaagatcagtgggtggacgcg
atgagagaatccatcgatgaggctttgtccaatcgggaggtcgctgatcgaatatgggcg
gagccgagcaacagcttctgcgccgactgcggcacccctaaaccggaatgggccgccatc
aacctgtgcgtggtggtctgcaagcgatgcgcaggagagcaccgaggactgggccctaac
atctctaaggttcggagtctgaaaatggacaggaaagtctggacccaagagctcatacag
gtgttctcgtcgctcggcaacgaccgggtcaacggtttctgggcggcgaacgtcccgccg
agcgaggcgctctcgccttccagctgcagtgacgaccggcggcgtttcatcaccaacaag
taccgccatggcaaatacaggaagtaccacccgttatacggaaaccagaaagagctgaat
aacgccttgtgcataaacgtgcagtgcagcgatgtgctggagacgttgagcctgattttc
tgcggcgccgacgtcaattgttcaacgggcatggccagttgtcccacgcctctctcctta
gccaacacgcacgcgcaacccttgcaagctgttttactgagccacaacctgaacacggct
cttcctcagtcagaggtggagagtgggatggacgaagttcactttccggccccaacttgt
gtttatcacaacggcttcctgttcaagactggatctatggcgaggcctgtcacagagcgc
aaggccagagaggagttcagtcgacgctggtgtacacttaatgagggcacgttcagctac
tatgagagtgacaagaactccaatccgaatggcgctctgagagcctcggagatcgtttgc
ttggctgtggatgtaccggacaaacacgggtacgaacacacgtttgagctctactcagag
tccgaccgtctttatttattcggcaccgacgacccgaacggccacaaagaatggatcaag
tccattgccaagagcgtcatcccagccagagccgagcctctgctgaggttaagttttgag
cgcatcgggcggctcaaatgcaaggacgggctgaacctgcagacctccaaggtgggctgg
ttcgccctggtgggctccacgcttcacgcttacctgaacgacagccgggaagaagagata
cgccttcgcaaactcaacgaactctcaatccagcaagataacggagtattagttttggtg
gagagaggaagaacgctgtacatagagggagagaggaagctggatttcgccggctggtgc
gccgccatccagtcggcggcggggagcggaggcgacacgctgagtcagcagcagctgacc
gacacggacataccggtcgtcgtccacagctgcgttgactacatcacgcaatgcggctta
acgtcggaggggatctaccgcaagagcggcgtgaactcgcgcgtggcggcgctgtgcgag
cgcttccgccgagacgctcgcagcctccggctgaaggaaggcgagcaccaggtggacgac
gtctccaacacgctcaagcgcttcttcagggagttggaagaaggccttttcacgtccgaa
gacggcggcacctggctcacgaccgccgccatccaggatgaaagtgtgaaaatctcccag
taccagaagctcttgaacaaactccctcgcgtcaacagggcgacgcttcgggccctgatc
aatcacttgtactgtgtgcagcgcttctccgagctgaaccaaatgaatctccacaacttg
gccatcgtgttcgggccgacgctcttccagacggacgggcaggactacacggcgggccgt
gcgatcgaggacctcatccagtactacacgctcgtcttcgaggtggatgagcaacaattg
aaaaagcagctggaagagatcacggttattatccaagtgcgcgagaaattgaacacaaaa
tttcccagcaccgaacccggcgggcatttcatctgcacagtttacttggaggaaaagaag
gacaccgccgaacaacacgtcaagatcccggcgtccatgacgtcggcggaactcacctgt
gagattctggacagacgcaacattcccgttaaagacaaagagtactggaactgctgggag
gtcgttgacaaggaagaaatggaacgtccgctgcactatcgagagcgagtcttacccatc
ctccactcttttggcaccgactcccatcttctcatcaagaaacacgtcgctatggaagcg
atgatcatctacttggccagcaaggttgacccgtccaaacacggcatgatgaaattccgg
gaggaacgaagcatcctgggcttggggttgtcttccggcagtttccacgaccgctatttc
atcctgaactccagctcgctgcggatgtacaaggaagtccgaagtaaccgtccggaacgg
gactggcccgtcaagaacctgagggtctacttggggatcaagaagaaagtccgtccccca
acgtgttggggcctgactgtggtctacgagagcaaaaaacaggacaagccggagagacaa
cagtggtatctctgttgtgagactcaacccgaaatgagggagtggtacgcaacttttcac
agtattcagaacgacggcgacgtgtggccacaggacggactccagccgagccgcgccagc
cgcgcgccgcccgactcgcgccacggtaacgtgtcgctgataccgctgcgcggcagcgag
aatgagatgcggaacagcgtagcagctttcagccaagatccgcttgctggccgctgttcg
gcgtcgtcaggtgacctcgccgccctccggtga
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