Syngnathoides biaculeatus (alligator pipefish): 133505397
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Entry
133505397 CDS
T09681
Symbol
actn4
Name
(RefSeq) alpha-actinin-4 isoform X1
KO
K05699
actinin alpha 1/4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04510
Focal adhesion
sbia04517
IgSF CAM signaling
sbia04518
Integrin signaling
sbia04519
Cadherin signaling
sbia04520
Adherens junction
sbia04530
Tight junction
sbia04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133505397 (actn4)
04518 Integrin signaling
133505397 (actn4)
04519 Cadherin signaling
133505397 (actn4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133505397 (actn4)
04520 Adherens junction
133505397 (actn4)
04530 Tight junction
133505397 (actn4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
133505397 (actn4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133505397 (actn4)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133505397 (actn4)
04147 Exosome [BR:
sbia04147
]
133505397 (actn4)
Membrane trafficking [BR:
sbia04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133505397 (actn4)
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133505397 (actn4)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133505397 (actn4)
Exosomal proteins of colorectal cancer cells
133505397 (actn4)
Exosomal proteins of bladder cancer cells
133505397 (actn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
Spectrin_5
Motif
Other DBs
NCBI-GeneID:
133505397
NCBI-ProteinID:
XP_061684579
LinkDB
All DBs
Position
8:27702995..27767747
Genome browser
AA seq
899 aa
AA seq
DB search
MVDYHATNNQYSSGGPQTYMEQENDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIE
NIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAE
EIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISW
KDGLAFNALIHRHRPELIDYDKLRKDDAVTNLNNAFEVAEKYLDIPKMLDAEDIVNTARP
DEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMQEYEKLASDLLEWIRRT
IPWLENRNPEKTMAEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLGGRPAF
MPSEGHMVADINRAWHTLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGK
EAMLTQRDYETASLSEVKALLRKHEAFDSDLAAHQDRVEQIAAIAQELNELDYYDAPNVN
ARCQKICEQWDSLGELTQRRRDSLQKTEKLLESIDELYLEYAKRAAPFNNWMEGAMEDLQ
DMFIVHNIEEIQSLIRAHEQFKSTLPEANKEREAIQAIHSEVQKIAQHNGIKLSGTNQYT
TITPQSIDSKWDQAQKLVPQRDRALQEELRKQQSNDKLRRNFAEQANVVGPWIQNKMEEI
GTISIEMIGTLEDQLTNLKEYERSIVDYKPNIDQLEGVHKLIQEALIFDNTYTPYSMEHI
RVGWEQLLTTIARTINEIENQILTRDAKGISQEELYEYRASFNHFDKDHSGALMAEEFKA
CLISLGYDVENDKQGDAEFARIMGIVDPNNTGTVTFQAFIDFMSRETTDTDTADQVIASF
KILAADKNFITADELRRELPPDQAEYCIARMAPYSGPDAIPGALDYMSFSTALYGESDL
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactatcacgccaccaacaaccagtactcgtccggcgggccgcagacctacatg
gagcaggagaacgactgggaccgggacttgctgctggacccggcctgggagaaacagcag
agaaagacattcacagcgtggtgcaactcccacctgcgcaaggccggcacacagatcgaa
aacatagaggaggacttcagagatggactcaaactcatgttgcttctggaggtcatctca
ggtgagcggttacccaagcccgagcgaggcaagatgagggtgcacaagatcaacaatgtc
aataaagctctggacttcattgccagcaagggagtcaaattggtctccatcggagcagaa
gaaatcgtggacggaaatgccaagatgaccctgggaatgatctggaccatcatcctccgc
tttgcaatccaagacatctctgttgaagagacatcggcaaaggagggtcttctattgtgg
tgccagaggaagaccgctccctacaagaatgtaaacgtgcagaacttccacataagctgg
aaggacggccttgccttcaacgctctcatccacagacatagaccggaactcattgactac
gacaagctcagaaaggatgacgcagtaaccaatctcaacaatgcctttgaggtggccgag
aagtacctggacatccccaaaatgttggacgcagaagacattgtgaacactgctcgtccc
gatgagaaagccataatgacttatgtgtccagtttctaccatgccttctctggagctcag
aaggcagagactgccgccaatcgcatttgcaaagtactagcggtcaaccaggagaacgaa
cacctgatgcaggagtatgagaaactggccagtgaccttctagaatggatccgtcggacc
attccctggctggagaacagaaatcccgagaagaccatggctgagatgcagcagaagctg
gaggacttcagggactaccgccgtgttcacaagccaccaaaggtccaagagaagtgtcag
ctggagatcaattttaacacactgcagaccaaactgagactgggtggcagacctgccttc
atgccatcagagggacatatggtggctgatatcaacagagcgtggcacacactagagggt
gcggagaagggctacgaggagtggctcctcaatgagatccgacgtcttgagagattggat
cacttggctgagaagttccgtcagaaggcctccatccatgaatcctggactgatggcaag
gaggccatgctcactcagagagactacgagacggcctcgctgtccgaggtgaaagcgctg
ctccggaaacacgaggccttcgacagcgacctggctgcacatcaggaccgagtggagcag
attgccgccattgcacaggaactcaatgagctggactactacgacgcacccaacgtcaac
gctcgctgccaaaagatctgcgagcagtgggacagcctcggagaactcacacagaggcgc
agagactcacttcagaaaacggagaaacttctggagtccatcgatgagctctatctggag
tacgccaagcgggcagcacccttcaacaactggatggagggggctatggaggacctgcag
gatatgttcattgtccacaacatcgaggagatccagagtctgatccgtgcccacgagcag
ttcaagtccaccttgcctgaggccaacaaggagcgcgaggccattcaggccatccacagc
gaggtgcagaagatcgcccagcacaatggcattaagctgagtggaaccaaccagtacacc
accattacgccacagagcatcgacagcaaatgggatcaggcacagaagctagtacctcag
cgtgaccgggctctgcaggaggagcttcgcaagcagcagtccaacgacaaactgagacgc
aactttgcagagcaagccaatgtggtcggaccctggatacaaaacaaaatggaggaaatt
ggcacgatatccatcgagatgatcggcactctggaggatcagctgaccaacctgaaggag
tatgagcgcagcattgtggactacaaacccaacattgaccagttggagggtgtccataaa
ctcatccaggaagccctcatctttgataacacgtacacgccctactccatggagcacatc
cgcgtgggctgggagcagctgctcaccaccatcgccaggaccatcaacgagattgagaac
cagatcctgacgcgtgacgccaagggtatcagccaggaggagctttacgagtaccgtgcc
tctttcaaccattttgacaaggaccatagtggtgccctcatggctgaagagttcaaggcc
tgtttgatcagtctgggttacgacgtggagaacgacaagcagggcgacgccgagtttgcc
cgtatcatgggcattgtggatcccaacaacacaggcacggtcaccttccaggctttcatc
gacttcatgtccagagagaccaccgacacagacacggccgaccaggtcatcgcctccttc
aagatcctggccgcagataagaacttcatcaccgctgacgagctgagacgggagcttccc
ccggaccaggccgagtactgcattgccaggatggcaccctattcggggcccgacgccatc
cccggcgccctcgactacatgtccttctccaccgcgttgtacggcgagagcgacctgtga
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