Syngnathoides biaculeatus (alligator pipefish): 133505552
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Entry
133505552 CDS
T09681
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04310
Wnt signaling pathway
sbia04520
Adherens junction
sbia04916
Melanogenesis
sbia05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
133505552 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133505552 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
133505552 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133505552 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133505552 (lef1)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
133505552 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
133505552
NCBI-ProteinID:
XP_061684657
LinkDB
All DBs
Position
9:complement(16365014..16438414)
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AA seq
358 aa
AA seq
DB search
MPQLSGGGGGDPELCATDEMIPFKDEGEPHKEQIFAELSHSEEEGDLADIKSSLVNESEG
SPNSNSHDGVRQSQDSYHEKHREHPDDVKHQDLYSKGHAYPTYPSYIMMGNMNDSYMTNG
SISPPMPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGSHSGHHPQDTKPQGMSRHHPG
PDMANFYSLSPGGVGQLTPPLGWFSHHMVPGPPGPHATGIPHPAIVNPQVKHEPLHETDI
MHMKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHA
LSREEQAKYYELARKERQLHMQLYPGWSARDNYKKKRKREKIQESAAGTGQRMKTAYI
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagttgtcgggcggcggcggcggggacccggagctgtgcgccacagacgaaatg
atcccattcaaggacgagggggagccgcacaaggagcaaatcttcgccgagctcagccac
tcggaagaggagggagacctggcggacatcaagtcatcgctggtcaacgagtccgaggga
agccccaacagtaacagccacgatggggtgagacagtcccaagattcatatcatgaaaag
cacagagagcatcccgacgatgtcaaacatcaggacctgtacagcaaaggccacgcatac
ccgacctaccccagctacatcatgatgggcaacatgaacgactcctacatgaccaatggc
tccatctcaccgcccatgcccagaacgtccaacaaagttcccgtggtgcaaccatcccac
gccgtccacccgctcaccccgctgatcacgtacagcgacgagcacttcgcgccgggttcc
cactccggccatcaccctcaggataccaaaccgcaaggaatgtccaggcatcatccggga
ccagacatggccaacttctactctctgtctccggggggagtgggacagctcacgccgcca
ctgggatggttctcccaccacatggtcccgggaccgccgggccctcacgccacggggatt
ccccacccggccatcgtcaacccccaggtcaaacacgagcccctgcacgaaaccgacatc
atgcacatgaaaccccaacacgaacagcggaaggagcaggagcccaaaagaccgcatatc
aagaagccgctcaacgccttcatgctctacatgaaagagatgcgcgcgaacgtggtggcc
gagtgcacgctgaaggagagcgccgccatcaatcagattctaggacggcggtggcatgcg
ttatctcgggaagagcaggctaagtattatgagttagcccgcaaggaacgacagctccac
atgcagctctacccaggatggtctgcccgagacaactataagaagaagcggaagcgggag
aagatccaggagtcggccgcaggtacggggcagagaatgaaaacggcgtacatctga
DBGET
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