Syngnathoides biaculeatus (alligator pipefish): 133505568
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Entry
133505568 CDS
T09681
Symbol
grin2bb
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04020
Calcium signaling pathway
sbia04080
Neuroactive ligand-receptor interaction
sbia04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
133505568 (grin2bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133505568 (grin2bb)
04082 Neuroactive ligand signaling
133505568 (grin2bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133505568 (grin2bb)
Ion channels [BR:
sbia04040
]
Ligand-gated channels
Glutamate (ionotropic)
133505568 (grin2bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
133505568
NCBI-ProteinID:
XP_061684690
LinkDB
All DBs
Position
9:19488524..19604525
Genome browser
AA seq
1692 aa
AA seq
DB search
MFKGRHLHSSAMLVSLPTSPSCPPVMHLPSSSPSCPRRPPAAPLKRASRLFLLFLVFFLL
LRPVCGARGRGGGAGSGPGGGPRGGGTQRGVVFPPQYSPGPQSLPPINPKLISSLSIAVI
LVGNSSEVALGAGLEKEDFLHIPYPPKVEVVTMNETDPKSIINRICTQMSRNSLQGVVFG
DDTDQEAIAQILDFISAQTHIPILGIRGGSSMVMAAKDDNSMFFQFGPSIEQQASVMLNI
MEEYDWYIFSIVTTYYPGYQDFVNKVRSTIDNSFVGWELEEVLLLDMSVDDGDSKIQNQL
KKLQSPVILLYCTKEEASTIFEVAHSVGLTGYGFTWIVPSLVAGDADHVPAVFPTGLISV
SYDEWDYNIEARVRDAVAVIATATSTMILDRGPHTLMKSSCFGTPDKKNANAGHSKEILR
YIMNVTFEGRNLSFSEEGHQIFPKLVIILLDKDRQWDRVGKWEKGSLAMKYHVWPRFELY
SVAAEREDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKVSNQTGDSGIYIKRC
CKGFCIDILKKIAKAVKFTYDLYLVTNGKHGKKVNGTWNGMVGEVVLKNAHMAVGSLTIN
EERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFV
FEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWA
FFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQKPNEFSPPFRFGTVPNGSTERNIR
NNYRDMHSYMTSFHQKNVDEALYSLKNGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKV
FASTGYGIAIQKDSGWKRAVDLAILMLFGDGDMEEFEALWLTGICHNEKNEVMSSQLDVD
NMAGVFYMLGAAMILSLITFICEHLFYWQLRFCFMGVCSGKPGVTFSISRGIYSCIHGVQ
IEENKSTIDSPSSTIKKNMNNTHSNILRLLRTAKDMTAVPGINGSPHAALEYNHGGRDSA
IYDIQEHRRSLVGHPPDCKTAPPYIQEDNMFTDYIGEVERTFGNLPLKDNNLYQDHYRHH
HPVSALGMSGPPPNRPRSLGSASSLEGGMFDCESLGGGVAPIFTTQPRPSMTHRNTNKFD
LIAGHPPADSNQVGFKGSNVYGRFSFKGGASSTGLIGGQERYCGGGGGGGGSGGDDGNVR
SDVSDISTHTVTYGNLEGNAKRHKQYRDSLKKRPASAKVRREQDEIELSGFRRRPHHHTV
HHHFPHGHLAHRTISPPLERKRGGGNASPYVFRKDKENLREFYADQFRSKESKWEQEGGS
GGSGVGVGSGGGICKSLVPVEDFLKGKIKKQESKGGLAPLSAGQQAHTCWEKAVSGLGGG
GIAGGEWECRSCHGVCHHGGGVGGACPAGGIGGGGVRPTSASCKRCDSCKIQPSNLYNIS
EDNHVVFPAGKINMGAGHTPTQSRKLGPGGRVLRRQHSYDTFVDLQREGSGRKGGGGGGQ
FAQPRSVSLKDKDRYTEGPSPYAQMFERYAGERDSPMFGGLGGDRAKGGSSFSLFRGGED
KVNQNPFVPTFGDDQCLLHGAKPYYVKKPQAQQQQQQQLLNNSRGGGDFRGSAGAASYLP
ASATAGVMSNVVAPRFPKDLCLGGVGGPMGNHLGANKLMPGGRDALGLGQRPFNGASNGH
VYEKLSSIESDV
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagggacggcatttacactcctccgcgatgcttgtcagcctccccacgtccccc
tcctgccctccggtcatgcaccttccctcctcctcgccctcctgcccccgtcgtcctccc
gccgcgcccctaaaacgggcctcgcgactgttcctgctcttcctcgtcttctttctgctc
ctgcggcccgtttgcggggcccggggcagggggggcggagcgggctcaggaccgggaggc
ggcccgaggggaggcggcacgcagcgcggcgtggtcttcccccctcaatattcccccggc
ccccagtctcttcccccgatcaaccccaaactcatcagctccctcagcatcgccgtcatc
ttggtgggcaactctagtgaagtggccctgggggcgggactggagaaggaggacttcctg
catatcccctaccccccgaaggtggaggtggtcaccatgaacgagaccgacccgaagagc
atcatcaatcggatctgtacgcagatgtccaggaactccctgcagggcgtggttttcggc
gacgacacggaccaggaggccatcgctcagatcctggacttcatctcggcccagactcac
atccccatcctgggcatccgagggggctcctccatggtcatggcagccaaggacgacaac
tccatgtttttccagttcggcccgtcgatcgagcagcaggcctcggtcatgttgaatatc
atggaggagtacgactggtacatcttctccatcgtcaccacgtactacccgggctaccag
gactttgtcaataaggtccgcagcaccatcgacaacagctttgtgggctgggagctggag
gaggtcctgctgctggacatgtcagtggacgacggggactccaaaatccagaaccagctg
aagaaactgcagagtccggtcatcctgctgtactgcaccaaggaggaggccagcaccatc
ttcgaggtggctcattccgtggggctcaccggctacggcttcacgtggatcgttccctcg
ttggtggccggagacgcggaccacgtgcccgctgtgttcccgacggggctgatctcggtg
tcgtacgacgagtgggattacaacattgaggccagggtgcgtgacgccgtagccgtcatc
gccacggcgacctccaccatgatcctggaccgggggcctcacaccctgatgaaatccagc
tgcttcggaacgcccgacaagaagaacgccaacgccggccactccaaggaaatactcagg
tacatcatgaatgtgacgtttgaagggcgtaacctgtcgttcagcgaagagggccaccag
attttccccaagctggtcatcatcctgctggacaaggacagacagtgggacagggtgggc
aagtgggagaagggctctctggcgatgaagtaccacgtgtggccgcgcttcgagctgtac
tcggtggcggccgagcgcgaggaccacctgtccatcgtcacgctggaggaggcgccgttt
gtcatcgtggaggacgtggacccgctcagcggcacctgcatgaggaacaccgtgccttgt
cggaaacagctcaaagtcagcaaccagacgggcgattcgggcatctacatcaagcgctgc
tgcaaaggtttttgcatcgacattctcaagaagatcgccaaggcggtcaagttcacctac
gacctctacctggtcactaacggtaaacacggcaagaaggtgaacgggacgtggaatggc
atggtcggagaggtggtgcttaagaacgctcacatggcggtgggctcgctcaccatcaac
gaggagaggtcagaggtcatcgacttttccgtgcccttcatcgagacggggattagcgtc
atggtttcccggagcaacggcaccgtctcaccttctgccttcttagagcccttcagtgcc
gacgtgtgggtgatgatgtttgtgatgctgctgatcgtgtccgccgtggccgtcttcgtg
tttgagtacttcagcccggtgggttacaatcgctgcctggcagacggcagagagcccggc
ggtccctccttcaccatcggaaaggccatctggctgctttggggtctggtgttcaacaac
tcggttccggtgcagaatcccaaaggtaccaccagcaagatcatggtgtcggtgtgggcc
tttttcgccgtcatcttcctggcatcctacactgccaacctggcagccttcatgatccag
gaggagtacgtggaccaggtgtcgggcctgtcggacaaaaagttccagaagcctaacgag
ttctcgccgccgttccgctttggcaccgtgcccaacgggagcacggagcgcaacatccgc
aacaactaccgggacatgcacagctacatgaccagcttccaccagaagaacgtggacgag
gccctgtacagtctcaagaacggcaaactggacgccttcatctacgacgcggcggtgctc
aactacatggcgggacgggacgagggctgcaagctggtcacgatcggcagcggcaaagtc
ttcgcctccaccggttacggcatcgccatccagaaggattcgggctggaagcgagcggtg
gacctcgccatcctcatgctctttggagacggtgacatggaggagtttgaggctttgtgg
ctgacggggatctgccacaacgagaagaacgaagttatgagcagtcagctggatgtggac
aacatggcgggggtcttctacatgctcggggccgccatgattctgtcactcatcaccttc
atctgtgagcatttgttctactggcagctgcgcttctgcttcatgggcgtgtgttccgga
aagcccggcgtcaccttctccattagcaggggaatctacagctgcatacacggagtacaa
attgaggaaaacaaatccaccatcgactcaccttcatccaccattaagaagaacatgaac
aacacccactccaacatcctgcgcttgctccggactgccaaggacatgactgcagtgccg
ggcatcaacggttcgccgcacgcggccctggaatacaaccacggcggccgcgattcggcc
atctatgacattcaggagcaccggcgcagcctcgtcgggcaccctcccgactgcaagacg
gcaccgccctacatccaagaggacaacatgttcacggactacatcggcgaggtggagagg
acttttgggaacttgcccctgaaggacaacaacttgtaccaggaccattaccggcaccac
cacccggtctcggctttgggtatgtccggtcccccgcctaataggccgcgtagcttaggc
agcgctagctcattggaaggcggcatgttcgattgcgaaagtttagggggaggagttgca
cccatcttcaccacccagccccgcccctccatgactcacaggaataccaataagtttgac
ctgattgcgggtcacccccccgcggattccaaccaagtcgggttcaagggaagcaatgtg
tacgggagattttcgttcaaaggaggcgcatccagcacggggctcatcgggggtcaagag
aggtactgcgggggaggcgggggcgggggaggctcaggaggggacgacggaaacgttcgc
tccgacgtgtcggatatctccacccacaccgtcacctacggcaacttggagggcaacgcc
aagcggcataagcagtacagggacagcctgaaaaagaggccggcctctgccaaggtcaga
cgggagcaggacgagatagagctgagcggcttcaggaggagaccccaccaccacaccgtc
caccaccacttccctcacgggcacctggcacaccgcaccatctcacctcccctggagcgg
aagcgaggagggggtaacgcttcgccttacgtattccgcaaagacaaagagaacttgagg
gaattctatgcggaccaattccgctctaaggagagcaagtgggagcaagagggtggaagt
ggaggaagtggcgtgggcgtcggtagcggtggcggtatctgtaagagcctagtacccgtg
gaagactttctgaaaggaaaaatcaagaagcaggagtccaaaggtgggctggctcccttg
tcggcgggccagcaggcccacacctgctgggaaaaggccgtctccggactgggaggaggc
gggatcgccggaggcgaatgggagtgtcgtagctgccacggcgtctgccaccacggcgga
ggcgtcgggggcgcgtgcccggctggcgggattggggggggcggcgttcgccccacctcc
gctagctgcaagcgctgcgactcgtgtaagatccagccgagcaacctgtacaacatcagc
gaggataaccacgtcgtgtttcccgcggggaagattaacatgggagcgggccacacgccg
actcagagcaggaagctagggccgggcgggcgggtcttgcgcaggcagcattcttacgac
acattcgtagacctgcagagggagggatcgggtcgcaagggagggggtggcgggggccag
ttcgcccagccccgtagtgtcagcctgaaagacaaagaccgctacacggagggccccagc
ccttacgctcagatgtttgagaggtacgcaggagaaagagattctcccatgtttggagga
ttaggcggcgacagggctaaagggggctcctcctttagtttgtttcgcggaggcgaagat
aaggtgaaccagaaccccttcgtcccaaccttcggcgatgaccagtgtcttttacacggc
gccaaaccgtactacgtcaaaaagccgcaggcgcagcaacagcagcagcagcagctactc
aacaacagccgaggaggaggggacttccggggctccgcgggggcggcttcttatttgccc
gcgtcggccacggccggggtgatgtccaatgtagtagcccccaggttccccaaagatctg
tgtctgggcggggtgggcggtcccatgggcaaccacctcggggccaacaagctcatgccc
gggggccgcgacgcgttaggtttgggccaaagacccttcaacggtgccagcaacggacac
gtctacgaaaagctctccagcatcgagtcggatgtctga
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integrated database retrieval system
