Syngnathoides biaculeatus (alligator pipefish): 133505630
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Entry
133505630 CDS
T09681
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04110
Cell cycle
sbia04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
133505630 (smc1a)
04114 Oocyte meiosis
133505630 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133505630 (smc1a)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
133505630 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
133505630 (smc1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
DUF8567
ABC_tran
Motif
Other DBs
NCBI-GeneID:
133505630
NCBI-ProteinID:
XP_061684855
LinkDB
All DBs
Position
2:complement(5811027..5827964)
Genome browser
AA seq
1230 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDDGEERSFTRMIIGSSSEYRINNKVVGLPDYSEQ
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLFHNETEIEKLNK
ELGQRNKEIDKDRKRMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKADMDELDKEMKAVELAKQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEMAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTDELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREITDLRDRMNLVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEQRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSSQTD
ESNSQRTSSSVLAKEALIEIDYSNLSDELKDALSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFELIKKERFDRFNTCFESVATNI
DKIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLAQYPDANPNPE
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgggttatctgaaactcattgagatcgaaaacttcaagtcatacaagggacggcaaatc
attggaccctttcataaattcacggcgatcatcggccccaatggatcgggaaagtcaaat
cttatggatgccatcagctttgtgttggcagagaagaccagcaacttgcgggtgaagact
ctgaaggatctaatccacggggcgcctgttgggaaaccggctgccaacagagcttttgtc
agtatggtctaccaggaggatgacggagaggaacgctccttcaccaggatgatcattggt
tcttcctctgaataccgcatcaacaacaaagttgtgggcttgccggattacagtgagcag
ctggaaaaacttggtattctgatcaaggctcggaacttcttggttttccagggagccgta
gagtcaattgccatgaagaaccccaaggagcgcacagctttgttcgaagagatctcgcgc
tcaggggagctggcccaggagtatgatcggaggaagaaggagatggtcaaggcagaagag
gacacgcagtttaactatcatcgcaagaagaacatagcggctgagcgtaaagaggccaag
caggagaaagaggaggctgagcgctaccagcgactaaaggatgaagtggcaagggccagc
gtccagttgcagctattcaagctcttccacaacgagactgagatcgaaaagctgaacaaa
gagctgggccagcgcaacaaggagatcgacaaggaccgtaaaaggatggaccacgtggag
gaggagctgaaagacaagaagaaggaacttgggaggctgatgagggagcaacagacaatt
gagaaagagatcaaagagaaggactctgagctaaatcaaaaaaggccgcagtacatcaag
gccaaagagaacacctcgcacaagatcaagaagcttgaggcggctcggaaatcgttgcag
aacgcccagaagatgtacaagaagcgcaaggcggacatggatgagcttgacaaggagatg
aaagcggtggagcttgccaagcaagagtttgaggagcgcatggaggaggaagcgcagagc
cagggtcaggacctcacattggaggagaaccaggtcaagcagtaccatcgtctgaaggag
gaagccagtaaacgtgcagccacactggctcaggagctggagaagttcaaccgggaccag
aaagctgatcaggaccgccttgacttggaggagaggaagaaagtggagacagaggccaaa
atcaaacagaaaattcgtgagattgaggaaaaccagaagcgcatagaaaagttggaggat
tacatcaccactagcaggcagtctctggatgagcaaaaacgcatggaggaggaactgact
gaggaggtggaaatggccaagaggaggatcgatgagatcaacatggagctgaaccaggtc
atggagcagcttggcgatgccaggatcgacagacaggagaacagtcgacagcagcgtaag
gctgaaatcatggagagcatcaaacgcctttaccctggctctgtgtatggccgtttgata
gatttgtgccagcccactcagaagaaatatcagattgctgtgaccaaagtgttggggaag
aacatggacgccatcattgttgattccgagaagacgggcagggattgtatccagtacatc
aaggagcagcgaggagaacctgagacttttctgccactcgactacctggaggtgaagcca
actgatgaaaaacttcgagagctgcggggagccaagctggttattgatgtgatccgctac
gagcctcctcacatcaagaaagcactgcagtacgcgtgtggcaatgctctggtgtgtgat
aatgtggaggatgccaggaggattgcttttggaggaccgtacaggcacaagactgttgcc
ctggatggaacccttttccagaaatctggtgtcatctcaggaggagccagtgacctgaag
gccaaggccagacgctgggacgagaaagcggtggacaagctcaaagagaagaaggagaaa
cttactgatgagctcaaggagcaaatgaaggccaagaggaaagaggcggagctgcgtcaa
gtgcagtcgcaggcacacggcctgcagatgagacttaaatattcccagagtgacctggag
cagaccaaaacacgccacctctctctcaacatgcaggaaaagtccaagttggagagcgaa
ctggcaaactttggtcctcgcatcaatgacatcaagaggatcatacagtcgcgcgagcgg
gaaatcacagatctcagggaccgcatgaacttggtggaggatgaggtgtttgtagagttc
tgcaaggagattggtgtgagaaacatcagagagtttgaggaggagaaggtgaaaagacag
aatgagattgccaagaagcgtcttgagtttgagacccagaagacccgcctgggaatccag
gtggactatgagaaaaaccagctgaaggaggaccaggagaaggtcatgatgtgggagcag
actgtcaagaaggacgaagctgaaattgaaagactaaagaaggaggaacagaggcacatg
aagatcattgatgagacgatggctcagctgcaagatctgaagaaccagcacctcaccaag
aaatctgaagtcaacgataagaaccacgagatggaggagatccggaagaaattgggaggt
gccaataaggagttaacacagctccagaaggaagtgacggccatcgagacaaaactggag
cagaagcgcagcgaccgtcacaacctgctgcaggcgtgcaaaatgcaagacatccggttg
cctcttcgctctggaacaatggacgacattagtcagggggaggggagttctcagacagat
gaatcaaacagtcagagaacatccagtagtgttttggctaaagaggcactcattgagatc
gactacagcaacctgtcggacgagctgaaggatgccttgtctgaggaggagatcaaggcg
gagaccaacacgctacagcagcgtctgaatgagcagcagagcatcctgcagaggataagt
gcccccaacatgaaggccatggagaagctagagagcgtcagggataagttccaggagacc
agtgatgagtttgaggccgctcgcaagagggctaagaaggccaaacaggcctttgagctg
atcaagaaggaacgattcgaccgcttcaatacctgctttgagtctgtggccaccaacatt
gacaagatctacaaggccctctcgcgcaacagcagtgcccaggctttcctcggcccagaa
aatccagaggagccctacttggacggcatcaactataactgcgtggctcctggaaagcgg
ttccgacccatggacaacctgtcgggtggagagaagactgtggcggctctggctctgctt
tttgccattcacagctacaaacccgccccgttcttcgtgcttgatgagattgatgctgca
cttgacaacactaacattggcaaggtagccaattatatcaaagaccagtcagtgcagaac
ttccaggcaattgtcatctccctgaaggaggagttctacaccaaagccgactcgctcatc
ggggtttatccagagcaaggagattgtgtgatcagcaaagtgctcacctttgacctcgcc
cagtatcctgacgccaacccaaatcctgaatag
DBGET
integrated database retrieval system
