Syngnathoides biaculeatus (alligator pipefish): 133505640
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Entry
133505640 CDS
T09681
Symbol
tmc6b
Name
(RefSeq) transmembrane channel-like protein 6b isoform X1
KO
K21988
transmembrane channel-like protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
133505640 (tmc6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbia02000
]
133505640 (tmc6b)
03037 Cilium and associated proteins [BR:
sbia03037
]
133505640 (tmc6b)
Transporters [BR:
sbia02000
]
Other transporters
Pores ion channels [TC:
1
]
133505640 (tmc6b)
Cilium and associated proteins [BR:
sbia03037
]
Other cilia and associated proteins
Stereociliary proteins
133505640 (tmc6b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
133505640
NCBI-ProteinID:
XP_061684867
LinkDB
All DBs
Position
9:4414112..4431101
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AA seq
847 aa
AA seq
DB search
MLTSTWATRSLKLDWSRLPLLNSEWAESKEHRSPADEEVVHDSFHQLIAEQIHNGDLGEA
FELQQPQKELDEESRDYVANLSSPGPESGEWRNRGRLMGMQDDERELDPSTGERWSSATL
KILSAMPSRTIGRSRGAIISQYYNRTMQLRRRKQSRPSIKDFSRSARPSIRGYGIETDNI
DAEVNKRERLVNNLQNLSVSDRVRMLRAMPLSVAEKNELRRLALKKERRTLSGNQIPCCS
RLKYYIIIAARQSWYSWLSFVHSLQLWQVALKRVSGRFGSGVLSYFLFLKTLLFFNLFLF
LVTGVFMVLPQAVHPPPPSNSRSSFTGLELLTGAGYFSDTVMYYGYYCNYTLRMNCSNKN
GQYISVSNKTSLDCTKHLPYKMPLAYFFTIGMAFFVTCIILVYSMSKSFGQSFRIDKSHS
ILAMKTFCSWDFKVIKKSSIKLMSENICIQLKELLAEVNHQHSKNTLCQTLWRLAVHCLA
WAICVASTTACVLCIYYFSEYMHQNLQQSSRSVTKDPLLHEASLLALPVVVSCINLLLPI
MFNLASWMEDYESPSVRTYVAIGRNLMLKVSVLGVLCYHWLGRVAADPTSIGLKCWENFV
GQELYRFLLMDFIFTLLNILFGEFLWRLFSENVLKKKRKPVFDIAKNVLDLIYGQTLAWL
GVLFTPLLPAVQILKLLLLFYIKKSSVMMNCQAPSRPYRVSQMTTIFITLLCFPSFLGAS
VCVTYTMWSITPSFSCGPFRELKTMFQAGKRWVEDLEKENPNLSVLARAHSYLVENPLFL
FVGAGIFLIVIYFYSQVVDGQRKIIGLLQEQIENEGEDKKFLITRLQSIHEQRRTPARRL
TSQDSTC
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgttaacttcgacctgggccacccgctcattgaagctggactggagtcgcctgcctttg
ctcaacagtgagtgggcggagagtaaggaacacaggagcccagcagatgaggaagttgtt
catgactctttccaccagctgatagcagagcagattcacaatggagacctgggtgaagct
ttcgagctgcagcagccacagaaagaactggatgaagagagtcgagactatgtggccaac
ctgtccagccctggaccggagagcggtgagtggaggaataggggaagactgatgggaatg
caagatgatgaaagagaattggacccttccactggtgaacgttggtcatctgccaccttg
aagatcctgtctgccatgcccagtcgcactatcggccgcagcaggggtgccattatctct
cagtactacaacaggaccatgcagcttcggaggcgcaaacagagcagaccctccatcaaa
gacttctcacgatcggctagaccaagcatacgaggttacggcatagagactgacaatata
gatgccgaggtaaataaaagggagcgtctggtgaataacttgcagaacctctcagttagc
gacagagtcaggatgctccgggcgatgccgctcagtgtagcagaaaagaatgaactcaga
aggctagctttgaaaaaggagagacgcactctgtctggtaatcagatcccctgctgcagt
cgactcaaatattacatcatcatagctgcaagacagagttggtacagttggctgtctttt
gtacactccctccaactgtggcaagtggcactgaagcgtgtgagcggtcgcttcggtagc
ggggtcctctcgtacttcctgtttctcaagaccctgctcttcttcaacctcttccttttt
cttgtgaccggtgtgttcatggtgcttcctcaggcagtgcaccctccacctccctccaac
agcagaagctctttcactggactggagcttcttactggagcgggatatttctcggacaca
gtgatgtactatggatactactgtaactacacgctgcgtatgaactgcagcaacaaaaat
gggcagtatatatctgtgtccaataaaaccagtctggactgtacgaagcatctcccttac
aagatgccacttgcctatttcttcacaatcggaatggcattctttgtcacatgtatcatt
cttgtgtacagcatgtcaaagtcatttggtcaaagcttccgaattgacaaatctcatagt
atcctggccatgaagactttctgctcctgggacttcaaggtcatcaaaaaatcttccatt
aaactcatgtctgagaatatctgcatccagctcaaggaactgctagcagaagtgaatcat
caacattccaaaaacactctgtgccagacgttgtggagactggcagtccactgtctggcg
tgggctatctgtgtagcgagcactacagcttgtgtgctctgcatctactatttctctgaa
tacatgcaccagaacctccagcaaagctctcgcagtgtgaccaaggaccccttgctgcac
gaggccagcctgctggctctccctgttgtggtgtcctgtataaacttactgctgcctatt
atgttcaacctggcatcctggatggaggactatgagtcaccatctgtgcgcacctatgtt
gccattggcagaaacttgatgttaaaagtgagcgtgcttggagtactctgctatcactgg
ctgggtcgagtggctgctgatccaaccagtatcggtctgaagtgctgggagaattttgtt
ggccaggaactttatcgcttcctgttaatggatttcatcttcactctactaaacatcttg
tttggagagtttctttggaggttgttttcagagaacgtgttaaagaagaagaggaaacca
gtgtttgatattgccaagaatgtccttgacctcatttatgggcaaacgctagcctggctg
ggtgttctcttcactcctctgctacctgcagtgcagatactgaagctcctgctgctcttt
tacattaagaagagcagtgtgatgatgaactgtcaggccccgagtaggccatacagagtc
agccagatgaccaccatcttcatcacactcctctgcttcccttccttccttggggcctcg
gtgtgtgtaacttacaccatgtggagtatcacaccttccttctcatgtggccccttccgt
gaactcaaaacgatgtttcaggcaggaaagcgttgggtggaggacctcgaaaaagaaaat
cccaatttatcagtgttggccagagctcactcatatctggtggagaaccctctcttcctg
tttgtgggagcaggcatcttcctgatcgtcatctatttctacagccaagttgtggatggt
caaagaaagatcatcggcctactgcaagagcaaattgagaatgagggtgaagacaagaaa
tttctcatcactcgcctgcagtccatccatgagcaaagacgaactcctgcccggaggctc
acaagccaggattctacctgctga
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integrated database retrieval system
