Syngnathoides biaculeatus (alligator pipefish): 133505660
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Entry
133505660 CDS
T09681
Name
(RefSeq) RNA exonuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133505660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbia03009
]
133505660
Ribosome biogenesis [BR:
sbia03009
]
Eukaryotic type
Pre-60S particles
RNases
133505660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNase_T
Transglycosylas
Motif
Other DBs
NCBI-GeneID:
133505660
NCBI-ProteinID:
XP_061684910
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All DBs
Position
9:16615348..16625863
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AA seq
787 aa
AA seq
DB search
MVTNPMELECKTESSLWTSFNGKKRKKNADHQHRQQQEIDAAKRVKREQGVADETEEVEP
RISALPDRLRRPITAEELTELLHYAALGGTGVKQPSWCVLLGQNRVNGVNVAVVEGVGQS
DFYKHYITLRNLRTKYSNRLTFALSTSCTRLLSTIFSSDVDTAEDLPGLQEDKDNGRLHK
VLRTHPVVLKYGTSKRGLTAYVLTQEEMIKRHYPVKGLPGFEDFACADCGDVADASPLFG
LDCEMCLTVKGYELTRVSLVDGEGKCVMDQLVKPDNKILDYLTRFSGITAAMLHPVRTTL
RDVQVRLRSLLPRDAVLVGHAVNNDLVALKLIHRHVIDTSLLYRREFGQRFKLKVLAEVV
LGRSIQTQEEKGHHPVEDALAALDLAKYFICKSPLKVVENHLKELWGLALEEEEEEEEST
EESTELAPSSRFADVLQRAGRSVCYVGKRCDISLHAAHQQWHSSDREVVASFRRQRKCPF
FSVLRLSSFINVPPRQDYKVRRCLQDMCVVFAGPLPAGFSEREVRRLFRCCGSVRTVKML
TTTHRLHAVVEFKLLEGAELALQILNGATVQGHTIKVQRPVSESTLDFDLNLEALMSDGV
NTRRLYALKLSSHASANGHAADGKLAVNGRASGSLPVKKRQLSEETLTRTFSRFGAVERI
HLMGKPGKRARHAYIHFECSEAKQAAMDSSEALWQEEYVTCPALTPVPMDEDGPHEFRGQ
TDPGPQDVAMCHMMKKLDARLGKLFTSLPECTLSAVLLLPHNSATEPASLGLCLLDIKRG
KCNRAVT
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggtaactaatcccatggagctcgagtgtaaaaccgagtcctcgctgtggacctcattt
aatggaaagaaaaggaagaagaatgccgatcatcagcatcggcagcagcaggagatcgac
gcggctaagagggtcaaacgcgagcaaggtgtcgccgatgagacggaggaagtggagccc
cggatctccgcgcttcccgaccgcctgcgacgtcccatcacggccgaggagttgacagag
ctgctgcactacgccgctcttgggggaacgggagtcaaacagccgagttggtgtgttctc
ctcgggcaaaaccgtgtcaacggggtgaacgtcgcggtggtggagggtgtcggccaaagt
gacttttacaaacattacatcaccctcaggaacctgaggaccaaatacagcaaccgtttg
accttcgcgttgtccaccagctgcacccgcctgctgtctacaatattcagcagtgacgtg
gacacggcagaggatttgcccgggttacaggaagacaaggacaacggcaggttgcacaaa
gtcctgaggactcacccggtggtcctgaagtacggtacgagtaagcgtggcctaacggcc
tacgtgctaacccaggaggagatgatcaagcggcattaccccgtgaaaggtctgccgggc
ttcgaggacttcgcgtgcgccgactgcggcgacgtcgcggacgccagcccgctttttgga
ctcgactgcgaaatgtgtctcacagtgaagggctacgagttgacccgagtctccctggtg
gacggcgaggggaagtgcgtgatggaccagctggtcaaaccggacaacaaaatactcgac
tacctcaccaggttctctggcatcacggcggccatgttgcatccagtcaggaccactttg
cgggatgtccaagtgcgtctgaggtcgctgttgccgcgcgacgccgtactcgtgggtcac
gccgtcaacaacgacctggtggctctgaaactgatccaccgtcacgtgattgacacgtcg
ctgctgtacaggagggagtttggccagaggttcaagctgaaagttctggctgaggtggta
ctcggaagaagcatccagacccaggaggagaaaggacaccatcccgtagaggacgccttg
gccgccttggatctagccaaatactttatatgcaagtcgcctctgaaggttgttgagaat
cacctgaaggaactttggggtttggcactagaagaagaagaagaagaagaagagtcgaca
gaagaatcaacagagcttgcgcccagtagcaggtttgccgacgtcctgcagcgtgcggga
aggtccgtctgctacgtgggaaaacgctgcgacatcagcttacacgcagcccatcagcag
tggcacagctcggacagagaggttgtggcctctttccgaagacagcgcaagtgtcccttc
ttctccgtgctcaggttgtcttccttcatcaacgtacctcctcgtcaagactacaaggtg
cgccggtgtcttcaggacatgtgcgttgtgtttgccggaccacttcctgccggcttctcc
gagagagaagtaaggcgactgttccgctgctgtggatcggtcaggactgtcaaaatgctg
acgaccacacacagacttcatgctgtggtggagttcaaactactggaaggagctgagcta
gcactacaaatactgaacggtgccactgtgcagggacacaccattaaggtccagagaccg
gtcagcgagtccacgctagacttcgaccttaatctggaggcgctgatgagcgacggcgtc
aacacgcgccggctgtacgcgctcaagctaagctcccacgcaagcgccaacgggcacgcg
gccgacggcaaattggcagtgaacggccgtgcgtccgggtcgcttcccgtcaagaaacgc
cagctgagcgaggagacgctgacgcggacgttcagccgcttcggcgccgtggaaagaatc
cacctgatgggcaaacccggaaagcgagccagacatgcctacatacattttgaatgttca
gaggcgaaacaggcggccatggattcctccgaggccctctggcaggaggagtacgtcaca
tgtccggcgctgacccccgtcccgatggatgaagacggtccacacgagttcagaggccaa
accgacccgggacctcaggacgtggcaatgtgtcacatgatgaaaaagcttgacgcacgc
ttgggcaaactcttcacgtctctcccagaatgcaccttgtctgccgtgctgctgctccct
cacaacagtgcgacagaacccgcatcacttggtctgtgccttttggatatcaaacgtgga
aagtgcaatcgcgctgtcacgtga
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