Syngnathoides biaculeatus (alligator pipefish): 133505665
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Entry
133505665 CDS
T09681
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04517
IgSF CAM signaling
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133505665
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133505665
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133505665
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133505665
Intermediate filaments
Intermediate filament-binding proteins
133505665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Phage_Mu_Gp36
BORCS6
Laminin_G_3
PHA_gran_rgn
Motif
Other DBs
NCBI-GeneID:
133505665
NCBI-ProteinID:
XP_061684919
LinkDB
All DBs
Position
9:complement(21731522..21749784)
Genome browser
AA seq
2290 aa
AA seq
DB search
MEPLSNPLEGRVRALKDERETVQKKTFAKWVNSHLSRVSCRISDLYTDLRDGRMLIRLLE
ILSGEKLPKATRGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTI
ILRFQIQDISVETGDNEEKKSAKDALLLWCQMKTAGYPDVNIHDFTTSWRDGMALNALIH
KHRPDLIDFDKLKKSNVHHNLQNAFNMAEQHLGLTQLLDPEDISVDHPDEKSVITYVVTF
YHYFSKMKALKVEGKRIGKVLDHAVETQKMVDKYESLASELLAWIEQTIVILDDRKFANS
LAGVQQQLQAFNSYRTAEKPPMFTEKGNMEVLLFTIQSKMRANNQRVYTPRDGKLISDIN
KAWECLEKAEHERELALRTELIRQEKLEQLARRLDRKAAMRETWLSENQRLVSQDNFGFD
LQAVEAAKKKHEAIETDIAAYEERVRALVVVTKELEVEGYHDIKRILARKDNVVYLWEYL
LELLKARRQRLEMNLDLQRVFQEMLHIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHAPV
EADIAIQSDRVKTVSASAHKFSSRDNGYKPCDPQVIEDRVAHLDFCYNELAQLAAERRAH
LEASRHLLKFFWELDEEEGWIREKEQVLSSAEYSKDLTGVLRLLGKQRGLEDEMSSRKGH
LQQTVARGQNMVLEDHFGAKRIQQRICDLQAQWASLEQLAVLKKKKLQEALALYQFQADA
DDVDAWTLDALRVASSGDTGHDEFSIQALVRKHKDTATEVASYHPVIDMLHKQASNLSRE
GAESDELWGRLARIEESFREVSELSKLRKQSLQDTMGLYKIVSEVASCEVWIDEKEQWLN
NMEIPDKLEDLEVVQHRFESLEPEMNSQASHVAVVNQIARQLLHSAHPAEKDIRTQQEKL
NSRWSQFRDLVDQKKDTLSSALGVQNYHLDCDETKSWIKEKTKVIESTQDLDNDLAGVMA
LQRKMSSMERELAAIEQKLRDLRGEALRLADDLPDRRDAITGRLTEIVAVWEELKNSLKS
REESLGEARKLQKFLRELDNFQSWLSRTQTAIASEDVANTLAEAEKLMCQHQGIRNEIQN
YEEDYQKMRDVGEMVTRGQTDAQYVFLRQRLQALDVGWNELHKMWENRQQLVSQSHVYQM
FLRDGKQAETFLNNQKYILAHTEIPVTLNGAEAAIRKQEEFMATMDANEDKINSVVDTGR
RLASHGNINGERILERLASIDDGHKKNREAAVELLIKLKDNRELQKFLQDCQELTLWINE
KMLTAQDMTYDGARNLHSKWLKHQAFMAELQSNKEWLDKIQKDGILLMSEKAETEAMVTE
KLTGLQRMWADLERNTQTKAQCLFDANKVELFIQSCADLDEWLGALEGEIKSHDFGKDLA
SVNILLKKQQILESQVEVRQREMVELQTHVKALGQEVTDADQGGGRRQLVERRFHELLEP
LRRRKDFLAASKEVHQFNRDVADEILWVKERMSLALSNDHGHNLQSVQLLIKKNQTLQKE
IRGHRPRIDDILERSRRLLKDDESGTGNTERQVSNLQLLWXQLTGEAELRHSRLEEAHAA
QRFYFDASEAEAWMSEQELYMMSEEKAKDQQSAVSMLKKHQITEQAVEDYAEAVHLLSKT
SRGLVDAGHPESERIGTRQSQVDKLYASLKDLCEERQARLQERLHLLLLNREVDDLEQWM
AEREAVAGSHELGQDYEHIVMLRERFREFTRDTGNIGQDRVDAVNRQADELINSGHGDAA
TAAEWKDGLNEAWADLLELLDTRTQILATSFELHKFYRDATELLARVRDKRREIPDGAGR
DRNTADLLRRAHAAFERDVHALSLQVRQLQEDAGNLLSAYAGDKADDIQRRESEVLAAWN
DLLEASDRRRLRLLDASDRFRFFNLVRDLMMWMDHVIWIVAAQENPRDVSSAELLMNQHQ
GVKAEADARKDDVNVCLELGKALLARKQDAAQEIEEKLLQLTAKREDMINKWEDRWEWLQ
LVLEVQQFSRDAXAWLLGQESYLSSQEAGRSVDEVENLLRRHEAFEKSAATWEERFSALE
RLTTMDLLEVRRQQEEEQQQRKAQLSSCIHVQPQQIDVDGNDSSNQSGTVVVGVSLVNGV
ADGREASPAPSPPPTEKKRSSETEAAVTQEGFLHWKHQWEGPNKKASNRFARSVASGSWH
HVLCKVAKQEMTFYKDTKAAAAAAQGATYPNHPRVSLKGVACEVAGGYKKKKHVFRLRVA
DGNQFLFQAKNEEEMSAWIRNILNTSAPVGPSAANGTLDADSPPPAVIESAAVKTKDKDK
RFNLFGKKKQ
NT seq
6873 nt
NT seq
+upstream
nt +downstream
nt
atggaacctctgagcaacccgctggagggtcgcgttcgagcgctgaaagacgaacgagaa
accgtgcagaagaagacgttcgccaagtgggtgaactctcacctctcccgagtatcgtgc
agaatctcggacctttacacggacctgcgagacggaagaatgctcatcagactcctggaa
attctgtcaggggagaagctgcccaaggccaccagaggtcgaatgcggatccactgcctg
gagaacgtggacaaggctctccagttcctcaaggagcagcgcgtccatttggagaatatg
ggctcgcacgacatcgtggacgggaaccaccggctgacgctgggcctcatctggaccatc
atcttacgatttcagattcaggacatcagcgtggagaccggagacaacgaagagaagaag
tctgccaaagatgctttgctgctttggtgtcagatgaagacagccggctatcctgacgtc
aacatccacgacttcaccacgagctggagagacgggatggccttaaacgcgctaatacac
aaacacaggcccgatttgatcgattttgacaagctgaagaagtccaacgttcaccacaac
ctgcagaacgctttcaacatggccgaacaacatttgggcctgacgcagctgcttgacccc
gaggacatcagcgtggatcatccggacgagaagtcggtcatcacatacgtggtgaccttc
tatcactacttctccaagatgaaggcgctcaaggtggagggcaagcgaatcgggaaggtt
ctggatcatgccgtggagacacaaaagatggtggacaaatatgagtctttagcgtccgag
ctgttggcgtggattgagcagaccatcgtcatcctcgacgacaggaagttcgcaaactcg
ctggcgggcgtccagcagcagctgcaggcctttaacagctacaggactgcggagaaaccc
ccaatgttcacagagaagggcaacatggaagttcttctcttcaccatccaaagcaagatg
agggccaacaaccagagggtctacacacctcgtgacggaaagctcatctcagacatcaac
aaggcatgggagtgtctggagaaggcagagcatgagagagagctagctctgcggacagag
ctgattcgtcaggagaagctggagcaattagccagacgcttggaccgcaaggcggccatg
agggagacctggcttagtgagaaccaaagactggtctctcaggacaacttcggctttgac
cttcaggccgtggaggcggccaagaagaagcacgaggccatcgagacggacatcgcggcg
tatgaagagcgcgtgcgggctctggtcgtggtaaccaaagaactggaagtggagggctac
catgacatcaaacgcatcttggccaggaaggacaacgtagtctatctgtgggagtacttg
ctggagttgctcaaggctcgccggcagcggctggagatgaacctggacctgcagagggtc
ttccaggagatgctacacataatggactggatggacgagatgaagatgcttcttctatct
caagattacggcaagcatcttttgggagtggaagaccttctgcagaaacatgcccctgta
gaggcggacattgccatccagtccgacagggtgaagacggtcagcgccagcgcccacaaa
ttctccagccgtgacaatggctacaagccttgtgatcctcaagtcatagaggaccgggtg
gcccatctggacttctgttacaatgagttggctcagttggctgccgagcgccgggctcac
ctcgaggcatcccgtcatctcctgaagtttttctgggagctagatgaggaggagggctgg
atccgggaaaaggagcaggtcctgtcgtcggccgagtacagcaaagatctgacgggcgtc
ttgcgtctgctcggcaagcagcgaggcctggaggacgagatgagcagtcgcaagggacac
ctgcagcaaactgttgcacggggccagaacatggtgctggaagaccactttggtgccaag
cgcatccaacagcgcatttgtgatctccaagctcagtgggcatcactagagcagctggcg
gtgctcaagaagaagaagctgcaagaagctctggctctgtaccagtttcaggccgatgca
gacgacgtggatgcctggacactggatgctctccgtgtggcctcgagcggagacactggg
catgatgagttctccattcaggctttagtcagaaagcataaagacactgcaacggaggtg
gccagctaccaccccgtcatagacatgctgcacaaacaggcctccaacttgtccagagag
ggggcggagtcggatgagttatgggggcgtctggcacgtattgaggaatccttcagggag
gtttcagagctcagcaagctgaggaagcagtcactgcaggacactatggggctctataag
attgttagtgaggtggcatcctgcgaggtttggatcgatgagaaagaacagtggttgaac
aacatggagatccctgacaaactggaagacctggaggtggtgcaacacagatttgaaagt
ttggagccggagatgaatagtcaggcttcccatgtcgcagtggtcaatcagatcgctcgt
caattgcttcacagcgctcatcctgctgagaaagacatcaggacccagcaggagaagctt
aacagcaggtggagccagttccgtgatttggtggaccagaagaaagacacactgagctct
gccctgggtgtgcagaactatcacctggattgtgacgagacaaagtcctggatcaaagag
aagaccaaagtgatcgaatccacccaagacctggacaacgacctggcaggggtcatggca
ctgcagcgtaaaatgagcagcatggagcgagaactggccgccatcgagcagaaactcaga
gacctgcgaggagaagccctgcggttggcagatgaccttcccgatcgacgtgacgccatc
acgggccgcctgaccgagattgtcgccgtctgggaggaactgaagaacagtttgaagagt
cgtgaggagtccctgggggaggcccgtaagctgcagaagtttttacgagagctagacaac
ttccagtcttggctctcccgcacccagacggccatcgcctccgaggacgtggccaacaca
ctggctgaggcagagaagctcatgtgccaacaccagggtatccgcaacgagatccagaac
tacgaagaagactatcagaagatgcgggacgtgggtgagatggtgacacggggtcaaaca
gatgctcagtatgtattcctgcgacagaggctccaagcactagatgtcggctggaatgaa
ctccacaaaatgtgggagaaccgccagcaactggtctcccagtcccacgtgtaccagatg
ttcctcagggatggcaagcaggccgaaaccttccttaacaaccagaagtacatcttggcc
cacaccgagatacccgtcaccctgaacggcgcagaggccgccatcaggaagcaggaagaa
ttcatggccaccatggatgccaatgaggacaagatcaacagtgtggtagataccggcagg
aggctggccagtcacgggaacatcaatggcgaacgcattctggagagacttgcctctatc
gatgatgggcacaagaagaatagggaggctgcagtggagcttctgatcaaactgaaggac
aaccgagagctgcagaagttcctgcaggactgccaggagctgacattgtggatcaacgag
aagatgctgacagctcaggacatgacatatgacggggcccgaaacctgcacagcaagtgg
ctgaagcatcaggccttcatggccgaactgcagtccaacaaggaatggctggataagatc
cagaaggatggcatactgctgatgtccgagaaggcggagacggaggcgatggtgacggag
aaactgaccgggctgcaaaggatgtgggcggacctggagcgcaacacgcagaccaaagct
caatgtctttttgacgctaacaaggtggagctattcatacaaagttgcgccgacctggat
gagtggctgggggcactggagggtgagattaaatcccacgacttcggaaaagacctagcg
tctgtcaatatcctgttgaagaaacaacagattctggagagccaggtggaggtccgccaa
cgtgagatggtagagctgcagactcacgtcaaggctctcggtcaggaggtgacggatgcc
gatcaggggggcggacgacggcagcttgtggagaggaggtttcacgagctgctggagcca
ttgcgtcgccgcaaggacttcctagcggcatctaaagaagttcatcagtttaaccgtgat
gtggcggatgagattctttgggtcaaagagaggatgtcgctggccttgtccaatgaccac
ggacacaacctacagagcgttcagctgctcatcaagaagaaccagacactccagaaggag
atacgaggccaccggccccgcatcgacgacatcctggagagaagtcgcaggctcctgaaa
gatgacgaatcgggcaccggcaacaccgaacggcaggtgtctaaccttcagcttctgtgg
tgacagctgacaggggaggcggagcttcgccacagccgtctggaggaggctcacgcggcg
caacggttctactttgacgcctctgaggctgaagcctggatgagcgagcaggagctctac
atgatgtcagaggagaaggccaaggaccagcagagcgccgtcagcatgctgaagaaacat
cagatcacggagcaggccgtggaggactacgccgaggccgtgcacctgctctccaagacc
agtcgtggactcgtggacgccggccacccggagagcgagcgcatcggcacgcgtcagtct
caggtggacaagttgtacgcgagcctgaaagatctgtgcgaggagaggcaggccagactg
caggagagactgcacctcttgctgctcaaccgggaagtggatgacttggagcagtggatg
gccgagagggaggcggtagccggctctcacgagctgggtcaggactacgaacacatcgtg
atgttacgggagcgattcagggagttcacgcgggacacgggaaacatcgggcaggaccgc
gtggacgccgtcaaccggcaggcggacgagctcatcaactcgggtcacggcgacgcggcg
acagcggccgagtggaaggacggactcaacgaggcctgggccgacctcctggagctgctc
gacaccaggacccagatcctggccacctccttcgagctgcacaagttctaccgcgacgcg
acggagctcctggctcgcgtgcgagacaagcgccgcgagatccccgacggggccggccgc
gaccggaacacggcggacctgctgcggcgagcccacgccgccttcgagcgcgacgtacac
gcgctcagcctgcaggtgagacaacttcaggaggacgccggaaacctcctgtcggcctac
gccggcgacaaagctgatgacatccagcgtcgggagagcgaggtcctggcggcgtggaac
gacctcctggaagcctcggaccgccgcagacttcgactcctggacgccagcgacaggttt
cgcttcttcaacctagtccgagacctgatgatgtggatggaccacgtgatctggatcgtt
gcagcccaggagaaccctcgggacgtgtcgtcggcggagctgctgatgaaccagcatcag
ggcgtcaaggccgaggcggacgctcggaaggacgacgtcaacgtctgcctggagctgggc
aaggcgctgctggccaggaagcaggatgcggcgcaggaaatcgaggaaaagctgctccag
ctgacggccaaaagggaagacatgatcaacaagtgggaggatcgctgggagtggcttcag
ctcgtcctggaggtgcagcagttctctcgagacgccnnggcgtggcttctgggccaggag
tcgtacctgtcgagccaggaggcgggccggagcgtggacgaggtggagaatctcctcagg
cggcacgaagcctttgagaagtccgccgccacctgggaggagcgcttctcggcgctcgag
cgtctcactacgatggacttgttggaggtgaggaggcagcaagaggaggagcagcagcag
aggaaggcccagttgtcatcttgcatccacgtccaaccacagcagatcgacgtcgacggg
aacgactcttctaatcagagtggcacggtcgtcgtcggtgtctcattggtcaacggagtc
gccgacggcagggaggccagccccgccccctcgccgccccccaccgagaagaagagaagc
agtgaaacggaagcggcggtgacgcaggaaggatttctgcactggaaacaccagtgggag
ggaccaaacaagaaggcgtccaataggttcgctcgaagcgtggcgtccgggtcgtggcat
cacgtgctgtgcaaggttgccaaacaggaaatgactttctacaaggacaccaaggcggcg
gcggcggcggcgcagggcgccacctatccaaaccacccgcgggtcagcctgaagggtgtc
gcctgtgaagtggccggcggctacaagaagaagaagcacgtcttccgactcagagtcgcc
gatgggaaccagtttttgtttcaagccaaaaatgaggaggagatgagcgcgtggatccgc
aatatcctcaacactagcgcccccgtcgggccgagcgccgccaacgggaccctggacgcg
gactccccgccgcctgccgtcatagagtctgctgccgtgaagacaaaggacaaagataaa
cgcttcaacttgttcggcaaaaagaagcagtga
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integrated database retrieval system
