Syngnathoides biaculeatus (alligator pipefish): 133505721
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Entry
133505721 CDS
T09681
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia02010
ABC transporters
sbia04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133505721
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133505721
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbia02000
]
133505721
Transporters [BR:
sbia02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
133505721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
133505721
NCBI-ProteinID:
XP_061685094
LinkDB
All DBs
Position
9:32007856..32041620
Genome browser
AA seq
2267 aa
AA seq
DB search
MAVFTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRIHYPPYEQHQCHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPGVVGNFNDSILSRLFIDAKKILLYTQNDR
SYEGYRELLGALHKMQKNTPRFKLKDFLRDNETLSHFLHHNASLPRHALKQIVEADVNLE
KVLTKGFGFHLRDLCNVTPLEEFVHIADPNVSHLTQEIICKSSRDWLNKAQSHFLSNLDF
LKPIRKDVKSDPKVVQEVSAATDYLLESLGELAVELASMKSWKDMRKEILYLNANATGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNSSDSEPLSTYDNTSTPYC
NTMMRRLESSPISRMIWRALKPLLVGKILYTPDTPATQRIIHEVNKTFQELGLLRDLGGM
WDEMKPKVWNFMENSEEMDLVRTLLQNNASATFLNGQLGGTEWRVSDVSNFLSKSSDDPR
APGSAYTWRDVFNETDQAIQTITRFMECVNLDKLEPVANEERLVNKSMGLLDNQKFWAGI
VFPDITQSNSSDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSY
LQDVIEQGIIRAVSGTKEKTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLKETMRIMGLNNGILWLSWFISSLVPLLISAGLLVMLLKTGNLLPYSDS
GVVFLFLSSFGVVTIMQCFLISTLFSRANLAAACGGIFYFTLYLPYVLCVAWQDYVGYGA
KLVVSLLSPVAFGFGCEYLSLFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLY
GVMTWYIEAVFPGQYGIPRAWYFPFTKTYWCGEKQNKNISTPLSKKGNADAVCIEEEPSH
IDPGVYIENLVKVYSHGKKLAVDGLSLRFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYILGKDIRSELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEIVKAEMEQ
IVNDVGLPHKRQSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDY
DLALHSCRNSASTVSYSKKAEKEDSVSESSSDGGLGSEPESETTTIDVSLISNVIFKHVS
EARLVEDLGHELTYILPYQSAKDGAFVELFHELDDRLSDLGISSYGISDTTLEEIFLKVA
EDSGVDSVELSDGVVPTRTRRRHAFGDHQSCLKPFTEDDFDFNDSEESRETDWLSGSDGK
GSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKY
PSLALHPSMYGEQFTFVSNDIPEDPHTSKLLEALTDKPGLRTRCMNGESILDTPCASMEE
WLIPQVPQSVKDMFDNGNWSMANPSPLCECSCEGRKRMLPDCPAGAGGLPPPQMKLSDRE
TLQNLTGRNVSDYLVKTYAQIIGKSLKSKIWVNEFRYGGFSIGARSSQLLADRDEIDEAI
AQLRRRVRLERGSAADRFLCSLSNFIQGLDTKNNVKIWFNNKGWHSIGSFLNVMNNGILR
ASLPPGEDPTKFGITAYNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFVVF
LIQERVNKAKHLQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFICFQQDAYVSSTNL
PVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGGNE
IGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNLFA
MAIEGVIFFSITVFIQYRFFIKARSSSSHLKPIGEEDEDVARERQRILSGAGQTDILELR
QLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTSGEAYLAGK
SVTTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKLGLV
KYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNTILSIIKEGR
SVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDLRPM
MDFIERELPGSTLKEKHRNMLQYQLPSSLTSLARIFSLLATNKEALRIEDYSVSQTTLDQ
VFVNFAKDQSDEDHSKDIHLSKRDAVVMDISQLSSFLMDNKTRESCV
NT seq
6804 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcttcactcaactgggtttactgctttggaagaacttcacttaccgaagacga
caaactattcagctgctgattgagattatctggcccctcttcatcttcttcatcctcatc
tcagttcgaattcactaccccccatacgagcaacatcaatgtcatttcccaaacaaggcc
atgccttcagcaggcactctgccctgggtacaaggaatcatctgcaacgccaacaacccc
tgcttccgaaacccaacccctggagagagtccaggggtcgtaggcaacttcaacgattcg
atactttctcgactatttattgatgccaagaagatcctgctgtacacccagaatgatagg
agctatgagggctaccgagagctgctgggggctctccacaagatgcagaagaacactccc
cgcttcaaactgaaggactttttaagggacaacgaaaccctctcccacttcttgcatcac
aatgcctcacttcctcgccacgcactgaagcagatagtggaggctgatgtcaatctggaa
aaggttctgacgaaaggttttggctttcatctcagagacctgtgcaatgtaacgcccctg
gaggagtttgtgcacattgcggatcccaatgtttcccatctgacacaagaaatcatctgc
aagtcctccagggactggctgaacaaggcccagagtcatttcctctccaacttggacttc
ctcaagccgattcggaaggatgtaaagtctgatcctaaagttgttcaggaagtctcagct
gccaccgactaccttctggagagtttgggagagctggccgtggagcttgccagcatgaag
agttggaaagatatgcgcaaggagatcctttatctcaacgccaatgccacgggctctccg
aatcagatgtaccaggctgtgtcccgtattgtctgtggccacccagagggaggcggcctc
aaaatcaagtctctcaattggtacgaggataacaactacaaagcgctctttggcaaccat
ggcaacagcagcgacagtgagcctctctccacctatgacaacacatccactccttattgc
aacaccatgatgcggagattggagtcgagccccatttccaggatgatctggagagcactg
aaacctctgctcgtgggaaagatcctgtacactccagatactccggccactcagaggata
atccatgaggtaaacaagaccttccaggagctcggcctcttgagggaccttggtggcatg
tgggacgagatgaagcccaaagtgtggaacttcatggagaacagtgaagaaatggacttg
gtcaggacgctactccaaaataacgccagtgccactttcttgaacggccaactcggtggg
accgagtggcgagtgtccgatgtgtcgaacttcctttccaaatcttcagatgacccaaga
gcaccagggtcagcatacacttggagggatgtcttcaatgaaaccgaccaggccatacag
accatcacccgcttcatggagtgtgtgaacctggacaaactggagccagtagcaaatgaa
gagcgattggtcaacaaatccatgggtctccttgacaaccagaagttctgggcagggatt
gtgttccctgacatcacccagagcaacagctctgacttgcctcccaatgtcaattacaaa
atccgcatggacattgataacgttgaaaggaccaacaagatcaaggatggttactgggac
cccggtcctagggcagacccttttgaggacttgcggtacatctggggtggattctcctac
ctgcaggatgtgattgaacagggaatcatccgagctgtgtcgggcaccaaggaaaagact
ggcatctacattcagcagatgccttacccctgctatgtggacgacatattcctgcgggtg
atgagtcgatcgatgcctcttttcatgacgttggcatggatgtactcagtggccatcatc
atcaagggagtggtctatgagaaggaggcccggctcaaagagaccatgaggatcatggga
ctgaacaacggcatcttgtggctcagctggttcatcagcagtttggttccattgctgatc
agtgccggattattggtcatgttgttgaagaccggcaacttgctgccttacagcgactca
ggggtggtcttccttttcctgagctccttcggcgtggtaaccataatgcagtgcttcctt
atcagcacattgttctcacgtgccaacttggcagctgcctgtggtggaatcttctatttt
accctctacctgccctacgtgctgtgtgttgcctggcaagactacgttggatatggagct
aaacttgttgtgagcctgctgtctcctgtagcttttggatttggctgtgaatacttgtcc
ctgtttgaggagcaaggtgtgggaatccagtggtccaacttgctggcgagccccctggaa
gaggacagctataacctgaccacctccatctgtctcatgctctttgatgctgtgctctat
ggagtcatgacatggtacatagaagctgtgttccctgggcaatatggaatccccagggct
tggtatttcccattcactaagacatactggtgtggtgagaaacagaacaagaacatctcg
actcctctgtccaagaaaggcaacgctgatgctgtgtgcatagaggaggagccaagccac
atagatccaggtgtttacattgagaatctggtgaaggtctacagtcatggaaagaagctg
gcagtggatggtctctccctgagattctatgagggacagatcacctccttcctgggtcac
aatggagctggcaagaccacaacaatgtcgatcctaacagggttgttcccgcccacttct
ggaacagcctacatcttgggcaaagacattcgctcagagcttagcaccatcaggcagaat
ctgggtgtctgcccacaacacaatgtgcttttcagcatgctgactgtggaagagcacatc
tggttctatgctcgcctgaaaggactgccagaggaaattgtaaaagccgagatggaacaa
attgtcaacgatgttggattgcctcataagcgacagtcacgcaccagcacactttccggt
gggatgcagcggaaactgtcagtggctttggcttttgtcggggggtcaaaggttgttatc
ttggatgaacccactgctggtgttgacccctatgcacggaggggcatctgggacctactt
cttaaataccgacaaggccgcaccatcatcctgtccacgcatcacatggatgaggctgac
atccttggtgatcgcatcgctatcatctcccacggcaagctgtgctgtgttgggtcctcg
ctcttcctgaagactcaactgggcaccggctactacctgaccttggtcaagagggactat
gacctggcacttcattcctgcaggaattctgcaagcactgtctcctacagcaagaaagct
gagaaggaggatagtgtgtctgagagcagttctgatggaggccttggcagtgaaccagaa
agtgaaactaccaccattgacgtttccctcatctccaacgtgattttcaagcatgtctca
gaggctcgtctggtggaggacctcggacacgagctcacctatatcctgccctatcagtca
gctaaagatggagcctttgtggaacttttccatgagcttgatgaccgtctcagcgacctg
ggaatatcaagctatggaatctcagacaccaccctggaggagattttcttgaaagttgct
gaggacagtggagttgattctgtggaactttccgatggagttgtgccaacgaggacacgt
cgccgccatgcatttggagaccatcagagctgcttgaagcccttcactgaagatgacttt
gatttcaatgactctgaagagtcccgtgaaactgactggctcagtggtagtgatggcaaa
ggctcataccaagtcaaaggctggagtctaaagagacaacagtttgtggcactactctgg
aaaagattcctctatgctcggcgttccaggaaaggcttttttgcacagattgtcctccca
gctgtgtttgtatgtattgcactggtgttcagcttaattgttcctccatttggaaagtac
cccagcctggctctccatcccagcatgtatggagagcagtttacctttgtcagtaatgac
atacccgaggaccctcataccagcaaactactggaagctttgacagacaaaccaggattg
agaacacgctgcatgaatggagaatccattttggacactccgtgtgcctccatggaggag
tggttgattccgcaagtacctcaaagcgtgaaggacatgttcgacaacggcaactggtcc
atggcgaatccatcacctctgtgcgagtgcagctgcgaggggcgcaaaaggatgctgcct
gattgtccagccggtgcaggcggcctcccacctccacagatgaagctcagcgacagagag
actcttcagaatttgacagggaggaatgtttcagattatctggtgaagacctatgctcag
ataattggaaaaagcctgaagagcaagatttgggtcaacgaatttagatatggtggcttc
tcaattggcgccaggagctctcagcttctagccgatagagatgagatcgatgaggcaatt
gctcaactgcgtcggcgtgtccgtctagaaaggggatcagcagcagatcgtttcttatgc
agtctttccaacttcattcaaggactagacaccaagaataatgtcaagatctggttcaac
aacaagggctggcacagtattggctcttttctgaatgtgatgaacaatggcatccttcga
gcaagtctcccaccgggagaagaccccaccaaatttggtatcactgcctataatcatccc
ctcaacctcaccaaggaacagctgtcacaagttgccctaatgacgacgtcggtggatgtg
ctggtgtcgatctgcgtgatattcgccatgtcctttgtgcctgccagctttgttgtcttc
ctcatccaagagagggtgaacaaggccaaacacttgcagtttatcagcggagtgcaacct
ttcctctactggttggccaactttgtctgggacatgtgtaactacattgtccccgccaca
ctggtcatcatcattttcatctgcttccaacaagatgcttacgtctcctccaccaacctg
cctgtgctggccttgctgctgctgctgtacggatggtcgatcacccctctcatgtaccca
gcctcatttttctttaagatacccagcacagcttacgtggttctgaccagtgtcaacata
ctgatcggaataaatggcagcgtgtccacctttgtactggagctgtttgggggcaatgag
attggtgggatcaatgacatcctgaagaatgttttcctcatcttccctcacttctgcctg
ggccggggattgatcgacatggtgaagaatcaagcaatggctgacgctttagagagattt
ggggaaaatcgtttccgttcccccctggcctgggacatggtgggaaagaacctctttgca
atggccattgaaggagtcatcttcttcagcatcaccgtctttatccagtaccgtttcttt
atcaaggccaggtcatcatccagtcacttaaagccaattggagaagaggatgaagacgtg
gccagagaacgacagagaatcctcagtggagcaggacagacggacattttagagcttcgt
cagctcacaaagatatataagcggaaacagaagccagccgtggaccggctctgtgttggc
attccccccggcgagtgttttggtttactgggagtcaatggcgcaggaaaaaccagtacg
ttcaaaatgctgacaggtgattcagtggtgaccagtggagaggcctacctggccggcaaa
agtgtaactacagaaatagatgaggtgcatcagaacatgggctactgtccgcagtttgat
gctatcaatgacctgctgacgggacgagagcatcttgagttctacgccattctcagaggt
gttccggagaaggaagtgtgtgaggtggcagagtggggcattcgcaaattgggattggtc
aagtatgttgacaaatcagcaggtagctacagtggaggcaacatgagaaaactgtctact
gccatcgctctcatcgggggaccacctgttgtgttcctggatgaacctacaacaggcatg
gacccgaaggcacggcgtgccctgtggaacaccatactaagcatcatcaaagagggacga
tctgttgtcctgacttcacacagcatggaggagtgtgaagcactttgcaccaggatggcc
attatggtcaacggcaggttccggtgtctggggagcgtacagcacctgaagaacaggttc
ggggatggttacaccatcatcctgagggtggccggaccggatccagacctcaggccgatg
atggatttcatcgagcgggaacttcctggcagtacactgaaggagaaacatcgcaacatg
cttcagtatcagctgccctcctccctcacctccctcgcacgcatcttctctctgctggcc
accaacaaggaggccctcagaatagaggactactccgtctctcagaccacactagaccaa
gtgtttgtaaattttgccaaggaccaaagtgacgaggaccactcaaaagacatccacctg
agcaaacgagacgcggtggtcatggacatttcccagctcagctctttcctcatggacaac
aagaccagggagagctgcgtctga
DBGET
integrated database retrieval system
