KEGG   Syngnathoides biaculeatus (alligator pipefish): 133505794
Entry
133505794         CDS       T09681                                 
Symbol
tbc1d1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
  KO
K18341  TBC1 domain family member 1
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sbia04131]
    133505794 (tbc1d1)
Membrane trafficking [BR:sbia04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    133505794 (tbc1d1)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    133505794 (tbc1d1)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab associated proteins
    133505794 (tbc1d1)
SSDB
Motif
Pfam: RabGAP-TBC RabGap-TBC_2 DUF3350 PID DUF2594 Snapin_Pallidin
Other DBs
NCBI-GeneID: 133505794
NCBI-ProteinID: XP_061685236
LinkDB
Position
9:21020834..21058096
AA seq 1358 aa
MFPTSSGGAMEGLYFEAKPTSHASRGARVPSETAPSLPPETTGGDLTGEAEEVRYELTLV
GSLPVHPATTTAMLPWVVAEIGRSREPGSAACLRVTPSWVRCVCAEARGLPWDPLTHTVL
FECRAHRVAKLIHDSQDPASFGCLLRDASHCACYVFKCRESAKVPEIISTLRQAGKSSAR
GDDVLVAPNKTLAVPSDAQPSERHLSGSSLPALASKPALSPTTFAKKFEVLFCGRVTVAH
KKAPPALIDECIEKFSQLARASGIARRGVNNGGLAGGLRRALAFQSNGPRSPSLGDGKRP
PLFQRDPSFPSLRALDENGLSPEISQANTTEAQAHPAGVRPTSLQENRTMLFTVGRSQIF
LVSPDTKKVAIEKSFREISFCSQGIRHVDHFGFICREFVEMGSCHFVCYVFQCTDESLVD
EIMLTLKQAFSVAALQHNAKNPSQQCDGCPVLQLHKLCERIEGLNASKTKLELQRHLATL
DNQDQAAVFESTMKSRPKSEQEENEHVMASLRNLYEERQKLHHHHHHHHHPLPKDTKQNE
ERAAAPVEAQPQSSSRQRLEQFKSRAKRSLTESLEGIWKGSSKAVSQPDSSERSHSTSSI
STVNSQNRSRSDDPLANASRLIPTGSLRCHNSTGDLKQLDPFASPSPGPSSSSPGDAQPL
GFRRRASTFSHPRTPSSSDDSPTGTLSCTPRQDPAAASKPKLLRHYSVSTDKPHQSKRLP
SDTALPPVPNCSSSSSLLLPPSSPSTGARLSKRRPLGGLRARLHSSSSVPNFLKFQFLAP
VEENDCPEPKSRDVAALYVSSAEYGVGDSPLRSHRHSWRQQIFLRVATPQKNTDVIERGE
CLDGGRACGGPAAVAGSVDLSMRALPEERSRRSKEELRELWRTAILQQILLQRMERENQK
LQASESDLQNKRLKLDYEEITPCLKEITLVWEKMLGTPGRAKVKFDSETVRASVAQGVPR
QHRGEIWKFLSEQYLLKQTTASRPPANGAPYKELLKQLTSHQHAILIDLGRTFPTHPYFQ
AQLGPGQLSLYNILKAYSLLDPEVGYCQGLSFIAGVLLLHMGEEDAFSMLKFLMYDVGLR
KQYRPDMIILQIQMYQLSRLLHDYHRDLYGHLEEQEIGPSLYATPWFLTAFASHFPLGFV
ARVFDMLFLQGPEVIFKVALSLLGSHKPLILQHDSLESIVDFIKTTLPNLGLVQMEKTIN
QVCEMDVSKQLQAYEVEYHVLQDELLDTPPSLNQHQRAAQLERTNQSLRQQNLDLLEELQ
VSNARVCSLESRVAALAQSESRLKERVSSLELEKQQLASTTARLVDLLAGLGVPTGPDGR
RLSPADAESTREALTLDSDSPRQPEPVVEKVLNGQGET
NT seq 4077 nt   +upstreamnt  +downstreamnt
atgtttccaacaagttcagggggcgccatggagggactttattttgaggcgaagcccacg
agccacgcgtcccgcggcgcccgcgtaccttcggagaccgctccgtcacttccacccgag
acgactggcggcgatttgacgggagaggcggaggaggtccgctacgagctgaccttggtg
ggttccctcccggtccaccccgcgaccacgacggcgatgcttccctgggtggtggccgag
atcggccggtcgcgggagccgggctccgccgcgtgtctgcgcgtgacgccgtcgtgggtg
cgctgtgtttgcgcggaggcccggggactgccgtgggaccccttgacccacacggtgctg
ttcgagtgccgagcccaccgcgtggccaagctcatccacgacagccaggaccccgccagc
ttcgggtgcctgctcagagatgcgtcgcactgcgcctgctacgtcttcaagtgccgcgag
agcgccaaggtccctgagatcatcagtacgctccggcaagccggcaaaagctctgcacgc
ggcgatgacgtcctcgtcgctcccaacaagactttggcggtccccagcgacgcccagcca
tcggaacggcacctcagcggttcttctcttcccgccttggcctccaagccggccctgtcg
cccacaacctttgccaaaaagtttgaggtgctcttttgcggccgtgtgaccgtcgcccac
aagaaggcccccccggcgctcatagacgagtgcattgagaagttcagccagttagctcgg
gcctcggggatcgcgagaagaggggtaaacaacggcgggttggcgggcggcctgaggcgg
gcgttagccttccagtcgaacggaccgaggagtccgagcttaggcgacggcaaacggccg
ccgctgttccaacgggaccccagcttcccgtctctgcgggccctggatgagaacggcctc
tcgccggagatctctcaagccaacactacagaggcgcaggcccacccggccggggtgcgg
cccaccagcctgcaggagaacaggaccatgctgttcacggtgggcaggtcgcagatcttt
ttggtcagtccggacactaagaaggttgccatcgaaaagagtttccgagaaatctctttc
tgctcacaaggtattcggcacgtggaccactttggcttcatttgcagggagtttgtggaa
atgggaagctgccattttgtgtgttacgtctttcagtgcaccgatgaatcattggtggac
gagatcatgctgaccttgaagcaggcgttctccgtagcagctttgcagcacaatgcgaag
aacccgagccagcagtgtgacggctgccccgtgctgcagctgcacaagctctgcgagaga
atagaaggtctaaatgcatccaaaaccaaactagagcttcagagacatttggctactctg
gacaaccaggatcaagctgcagtctttgagagtaccatgaagtctcgtcctaagagtgaa
caggaagaaaatgagcacgtaatggcgtctttgagaaacttgtatgaggagagacagaag
ctccatcatcatcatcatcatcatcatcatcctctgcccaaggacaccaaacagaacgag
gagagggctgccgccccagttgaggcgcagccgcaaagtagcagccgacagcgtcttgag
cagttcaagagtcgagcgaagcgctctctgaccgagtccttggaggggatatggaaggga
agcagcaaggccgtttctcaaccagacagcagtgaaagaagccacagcacctcctccatt
tccactgtcaatagccagaaccggtcccgctcagatgaccccctagctaacgcctcccga
ttgatacccaccggctcgctcaggtgccacaactcgaccggagacctgaagcagctcgac
ccctttgcctccccgtcccccggcccctcctcctcttcgccaggtgacgctcagccgctg
ggcttccggagacgggccagcaccttcagccacccgcgtactccctcctcgtcggatgat
tccccgacgggcacgttaagttgcacgccgcggcaggaccctgcggctgcttcgaagccc
aaactcttgcgacactactcggtcagcaccgacaagccgcaccagagcaaacgccttccg
tccgacactgcccttcctcccgttcctaactgctcctcatcctcctctcttctgctccct
ccttcctctccttcaaccggagcaaggctcagtaaaagacgtcctctgggtggactgcgc
gctcgactccactcctcctcctctgttcctaactttttgaaatttcaattcctggcccct
gttgaagaaaacgactgcccagaaccaaaaagcagagatgtagcagccctctatgtatca
agtgcagaatatggcgtgggagacagcccgttgcgcagtcaccgacactcctggaggcag
cagatcttcctgcgggtcgcgacacctcagaaaaacacagacgtcattgagcgtggcgag
tgcctcgatgggggtcgggcatgcgggggcccagctgcagtcgcaggaagcgtggacttg
tccatgagggcgctgcccgaagagagaagcaggaggagcaaagaggagctgagggaactg
tggaggactgccatcctgcaacaaatcctcctgcagaggatggaacgagagaaccagaaa
ctgcaggcttctgagagcgatttgcagaacaagcgtctcaagctggactacgaggaaatc
actccgtgtctgaaagagatcacgctggtctgggagaagatgctgggaacccctggaagg
gcaaaagtcaaatttgacagcgaaaccgtacgtgcgtcagttgctcaaggggtgcccagg
cagcatcggggcgagatctggaagttcctctcggagcagtacctgctcaagcagacgacg
gcatcccggccgccggccaacggggcgccgtacaaggagctgctcaaacagctcacctcg
catcagcacgccatcctcatcgatctgggtcgcacttttcccacccatccctatttccaa
gcccagctggggcccggacaactgtctctgtacaatatcctgaaggcatactcgctgttg
gaccctgaggtcgggtactgccagggcttgtccttcatcgctggagttttgcttttgcac
atgggcgaagaagacgcattcagcatgcttaaatttctcatgtacgacgtcggcctgcgc
aaacagtaccggcccgatatgattatcctgcagattcagatgtaccagctgtcgcgtctg
cttcacgactatcaccgggacctctacggccacctggaggagcaggagatcgggcccagc
ctgtacgccacgccctggttcctcaccgccttcgcctcacacttccccctcggcttcgtt
gccagagtcttcgatatgctgttcctccaggggccggaggtcatcttcaaggtggccctg
agtctcttggggagccacaaacctttgatcttgcaacacgacagcctggagtccattgtg
gacttcatcaagaccaccttgcccaacctgggcctggtgcagatggagaaaacaatcaat
caggtttgtgagatggacgtctccaagcagctgcaggcctacgaggtggagtaccacgtc
ttgcaggatgaactcctggacacgcccccgagcctcaatcaacaccagcgcgccgcacag
ctggagaggaccaatcagagcctgagacagcagaacctggatctcctggaggagctgcag
gtgtcgaacgctcgggtttgcagcctggagagtcgagtggcggcgctggcgcagtcggag
agccgtctgaaggagcgagtttcttctctggagctggagaagcagcagctggcgagcacg
accgcccgcctcgtcgacctgctcgccggcctgggggtcccgacgggccccgacggtcgc
aggctgtccccggcggacgcggagtcgacgcgggaggctctgactttggactcggactcc
ccccgccaacccgagcctgtcgtggagaaggtgctcaatggacaaggggagacttga

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