Syngnathoides biaculeatus (alligator pipefish): 133505927
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Entry
133505927 CDS
T09681
Symbol
mbd6
Name
(RefSeq) methyl-CpG-binding domain protein 5 isoform X1
KO
K23219
methyl-CpG-binding domain protein 5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133505927 (mbd6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133505927 (mbd6)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
133505927 (mbd6)
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
133505927 (mbd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
MBD
Motif
Other DBs
NCBI-GeneID:
133505927
NCBI-ProteinID:
XP_061685468
LinkDB
All DBs
Position
2:7095481..7121996
Genome browser
AA seq
1420 aa
AA seq
DB search
MNGGKDCEAGNERQVIPVQVPIGWQRRREHGSILYVSPSGSVLSSLEQVKNYLLTDGTCK
CGLECPLILHKVFNFDPGAVVKQRTAEDVKSDEDVTKLCIHKRKLLAVATLHKSMENHPP
LTLISSVGGTPSVVVSHSATHRAIRTKPHDVLPNAAGPDCKNPYKMVMAAGHQQQKYPPK
EIGGGQHSELSHGYPRSQRLPSSDPGPKSPYRVGYGGMLSPPISTTKFCRDGSQSPSTDT
LASPEGFQRANSCVFPVAGSPNSVSIHGISRTPLSPPNMMLHVSPVSQSACAMTVRTSTP
LSPTATAKSPVMNNIPRGNFPYGVDVPNSAFHHKAQPPVHPVPPTPPVPHSCVLQKRQLT
SEKDPLGILDPIPSKPISQPAANTPNFQPNIHTQVSMMNVNIPPPAIVPLPSNLPLPTVK
PGPIGHGGQVQRTQQSGPASSMSPSPVTSPVHMAVSSLGRVEVSPHRSRSNSTSSDHGNF
VMPSGHQGPCSTMKIPPRSPRSAIGSPRPSMPSSPSTTNKNDSLHQYRDPQLLSSIGTLQ
HNNSMYSPSSSSSSSSPLPMPSASQKGQAGLLRMPLNQILTQQNAASFPASSLLSAAAKA
QLAHQNKHSTTGVTAAGIASGGGNGDGGATHPGSISGHLASEGHSTLNPMLPPNFTMLLN
CPEGQSGRAALRDKLMAQQRDPIRKRKQSSGSTSVNHDSSNNMAFNVLNKPSIGGPQMAV
PNAEQMRKVSRLGNLPPNTSMAQLLQSMSSQSSHNIGGNNHHPGLSSGSSQGVTQIHYND
STSKLHSGLQQNLMSQQRLGVQVNGMQHGQNMDTAGSHLGSRPGQIPDLMAQIKASTLNN
CGPIGPASGLVGTEGMALGRPHTNPPPLSHSGPHPSQHNLHHRVGQTHVVMLRGDGSCTK
NISDTGNPSSISLQPNVNTGRGQMYKQPVHQIMQQGGGSQPAYQGQQHYPDNPPYTDSSN
ANVDSMVCLYQNYQQGLMAHTQFSEGQPHQTEGLRTGTPCSDSAPDRGSESVDTIYRAVV
DAASKGMQVTITATVSGTTQASTMPALSAMSAFTASIGDPVNLPQVVSAVLHEEEEVLPQ
QGRTRQLRPVGGKKNVDPGKRTPDATEANDYFRSPGRGTPRGHWDGEIHHSGGFDTHSNN
GVWGGEEFLECSTHVRSSPCMERPATLPPVPPSSINGSSDHSVALAHGKTFHDNSYRFNN
CSRTPTNYKERLEQTVERCAHINGTTPLFNTRGFGDVIGPPRQEQTADDQSPSSSTSLEG
PLASAKDYSHFNGHFNGMAPSPSDTKSLSSEEDLRQPDSPSSELLHYRSRTFNMGELVWG
QLKGFPHWPAKLAGDEQVHTAAMQLRDQTKVEQEKLKTLTHDLEALDRVAKRGLKPGKLN
NHLEAAIHEAMSELDKISATIPSRDRQVKLPKPKRRKISR
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcggaaaggactgtgaggcaggaaatgagaggcaggtcatccctgtccaagtc
cccattggctggcagcgcaggagggagcatggcagcatcctttatgtcagtcccagtggc
tctgtgctctccagtttggagcaggtgaagaactaccttctcacagatggaacatgcaaa
tgtggtctggaatgcccactcattctccacaaggtgtttaactttgacccgggggcggtg
gttaagcaaaggacagcagaagatgtgaaatcggatgaagatgtcaccaaactctgtatt
cacaagcgtaaacttctggctgtggctacactgcacaaaagcatggaaaatcacccgcct
ctcacactaataagttctgtaggaggtacgccgtctgtggttgtgtcgcattctgcaact
catcgagcaataaggacaaaaccccacgatgtcctaccaaatgctgctggcccagactgc
aagaatccttacaagatggtgatggcagctggccaccaacagcagaagtaccctcctaag
gaaattggtggagggcagcattcagagctcagccatggataccccaggtcacagaggttg
cccagcagtgatccaggccccaaatccccctaccgggttgggtatggagggatgttgagc
ccacccatctctaccactaagttttgcagagatggctcgcaatcacctagtacagacact
ctggccagcccagagggctttcaaagagcgaattcttgcgtatttccagttgctggtagt
cccaactcggtttccatccatggaatctccagaacgcctctttctccacctaatatgatg
ctccatgtatctcctgtgagccaatcagcctgtgccatgacagtaaggactagcacacca
ctctcacccacagccactgccaaaagccccgtgatgaacaatatcccacgaggaaacttc
ccctatggtgtggacgtgcccaattcagctttccaccataaagcacagcctcctgtgcat
cctgtacccccaactcctccagtgccacactcctgtgtcctgcaaaaaaggcagctgaca
tctgaaaaagacccattaggcatcctggaccctatccccagtaagcccattagccaaccc
gcagccaacaccccaaacttccagcccaacatccacactcaggtatcaatgatgaatgta
aacatcccccctcctgccattgtccccttgccaagtaacttacccttgcccacggtaaag
cctgggcctattggccatggtggccaagttcaaagaactcaacagagcggtccagcttcc
tccatgtcgccatcccctgtcacctcccccgttcacatggcagtatcctcccttggacga
gttgaagtttcaccccatcgatcacgctctaattcaacctcttctgaccatgggaatttt
gtgatgccgtcagggcatcagggcccatgcagcaccatgaagataccccctcgatctccc
agatcggccattggctctcccaggccatctatgccttccagcccctccaccacaaacaaa
aatgactctctccaccaataccgagatccccagctgctttcatcaattggcacccttcag
cacaacaactccatgtactcgccctcctcctcctcctcctcctcttcccctttgccgatg
cctagtgcttcccaaaagggccaggcaggactgttgaggatgcctctaaaccagattctc
actcaacagaatgctgcctccttcccagccagcagtctgttgtcagcagcagccaaagca
cagctagcacatcaaaacaaacacagcactactggtgtgactgctgctggtatagctagt
ggtggaggaaatggagatggtggagccacgcaccctggctcaattagtggtcatcttgct
tcggaaggacacagcactttaaatcctatgctcccgccaaacttcacaatgctgctcaac
tgccctgagggtcagagcggtcgagcggctctaagagacaagcttatggctcagcagagg
gaccccatacgcaaacgaaagcaatcatcaggtagcacatctgtcaaccatgacagcagc
aacaacatggcctttaacgtgctgaacaagcccagtataggaggaccgcaaatggcagtt
cccaatgcagagcaaatgcgaaaggtcagtcgtcttggaaacctcccaccaaacacctct
atggcccaactcctccagtctatgagcagccagagttcccacaacattggtggcaacaac
caccaccctggcctcagctcaggatcttctcaaggagttactcagatccactacaacgac
tccacatccaagctgcatagcggcctccagcagaacctcatgagccaacagagacttggg
gtccaagtcaatggcatgcagcatggtcagaacatggacactgctggcagtcacttgggc
tcacggccaggtcagatccctgacttgatggcccagattaaggcttctaccttgaataac
tgtgggcctattggtccggctagtggactagtaggcactgagggcatggcactcggacga
ccacacactaatcctccaccactatcccattctgggcctcacccttcgcagcacaacctc
catcatcgggtagggcagactcacgtggtaatgctgcgtggcgatggaagctgtacgaag
aacatttctgacacaggaaacccctcttcgatcagcttgcagccaaatgttaacactggc
agaggacagatgtacaagcagccggtccaccagatcatgcaacaaggtgggggctcccag
ccagcctaccagggtcagcaacactaccccgacaacccaccttacacagacagcagcaat
gctaacgttgactccatggtttgcctctaccagaattaccagcaggggctaatggcacac
acccagtttagcgaggggcaaccacaccaaactgaaggcttacgaactggaaccccctgc
tctgatagtgcccctgacagaggctcggagtctgtggacacaatctatagggctgtggtg
gatgctgccagtaaagggatgcaagtaactattaccgccacagtaagtgggaccacacag
gcaagcaccatgcctgccctcagtgccatgagtgccttcactgcctccattggggaccct
gtcaacctgccccaggtggtcagtgcagttctgcacgaggaagaagaggttttacctcag
caaggcagaacacggcagctgaggccagtcggaggtaaaaaaaatgtggatcctgggaag
cgcactccagatgccaccgaggccaatgactacttccggtcccctggccgtggaactccc
aggggccattgggatggggaaattcatcacagcggaggcttcgatacacatagcaacaac
ggcgtctggggcggggaggagttcctcgagtgctccacccatgttaggagtagtccctgc
atggaacgacctgcaacattgccccccgtcccaccttcctccatcaatggctccagtgac
cacagtgtggccttggctcatggcaagacctttcatgacaatagctaccggttcaacaac
tgtagccggacacccactaactacaaggagcgtctagagcagacagtggaacgttgtgct
cacattaacggcaccaccccgctcttcaacacccggggttttggagatgtcattggacca
cctcgccaggaacaaacagccgacgaccagtctcccagttcatctacgagccttgaagga
cctctagccagcgccaaagactacagccacttcaatggccacttcaacgggatggcgccc
agcccctccgacaccaagagtctgagcagcgaagaagaccttcggcagccagactctcct
tcctcagagctgcttcactaccgttccaggacattcaacatgggagagctggtgtggggc
cagctcaagggcttcccccattggccagccaagctggcaggggatgaacaggtgcacacc
gctgccatgcaactgcgggatcagaccaaggtagagcaagagaaactaaaaactttaaca
catgacttggaggcacttgatcgagttgccaaaagaggcttgaagccagggaaactgaat
aatcacttggaagctgctatccacgaggccatgagcgagctggacaaaatttcggccacg
atcccgtcaagagatcgccaggtgaagctacccaagcccaagaggaggaagatctccaga
tag
DBGET
integrated database retrieval system
