Syngnathoides biaculeatus (alligator pipefish): 133505997
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Entry
133505997 CDS
T09681
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133505997 (slit2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sbia00536
]
133505997 (slit2)
Glycosaminoglycan binding proteins [BR:
sbia00536
]
Heparan sulfate / Heparin
Axon guidance molecules
133505997 (slit2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRR_9
LRRNT
LRRCT
LRR_1
EGF_TEN
hEGF
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
Laminin_G_3
EGF_3
Motif
Other DBs
NCBI-GeneID:
133505997
NCBI-ProteinID:
XP_061685633
LinkDB
All DBs
Position
9:complement(21191121..21254242)
Genome browser
AA seq
1558 aa
AA seq
DB search
MLGRGARSAVSALALALALALALVLVASGRGAAAQPCPAQCSCAGTAVDCHGQGLRSVPR
NIPRSVERLDLNANNLTKITKADFAGLRNLRVLQLMENKLSTIERGAFQDLKELERLRLN
RNNLAVFPELLFVGTSKLHRLDLSENQIQGVPRKAFRGAVEIKNLQLDYNHIGCIEDGAF
RALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPRLG
LYTQCMGPPHLRGHNVAEVQKKEFVCTGYQSPSSSCSVLQCPESCTCSNNIVDCRGKSLT
EIPGNLPETITEIRLEQNSIKVIPAGAFSSYKKLRRIDLSNNQISELAPDAFQGLRSLNS
LVLYGNKITEISKGLFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKLQTIA
KGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTGPRRLANKRIGQIK
SKKFRCSGSEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLSKIPDHVPQYAAELRL
NNNEFTVLEATGIFKKLPQLRKINLSNNRIADIEEGTFEGASGVNELILTSNRLENVHQR
MLTGLSGLRTLMLRSNRIGCVSNSSFGGLSSVRLLSLYDNRITSVSPGAFDALHSLSTLN
LLANPFDCNCRLAWLGDWLRRKRIVTGNPRCQSPYFLKEIPIQDVAVQDFACEDGREDDS
CSPAPRCPAECSCLDTVVRCSNKGLAALPRGLPKETTELYLDGNRFTQVPAELSDYKRLT
LIDLSNNQIGTLSNHSLSNMSELLTLILSYNRLRCIPVRAFDGLKSLRLLSLHGNDISLI
PEGAFQDLSSLSHLALGANPLHCDCHMQWLSDWVKSGYKEPGIARCAGPGDMTDKLLLTT
PSKKFTCTGPVDVAIRAKCEPCLSSPCKNDGTCSEDPVRYYRCACPYGFKGQNCEETIHA
CIGDPCHNGGTCHLKEGQGTSFWCVCPEGFEGDSCEFNIDDCEDNDCENNSTCVDGINNY
TCMCSPEYTGELCEEKLDFCAPELNPCQHHSKCILTPHGYKCECGPGYTGEHCELDLDDC
DGHKCQNGAQCADAVNGYTCVCPEGYSGLFCDLSPPMVLPRTSPCDDHDCLNGAQCVVTG
TDPRCQCLHGYEGERCQTLVSVNFVDRQSYLQLPSDLISPPTNISLQVRMSSASTWTPRG
QKNAHPCPLLLFSFQIATDEDSGVLLYKGAKEHIAMELYRGRVRVSYDTGTHPPSAIYSV
ETVNDGSFHAVELLASEQTLSLSIDGGPPKSIRGVGKQSTLDVESPLYLGGMPARASASG
GGPGGPEGSSFRGCLRNLYVNGELRDLGWPGRGVEPGCRPCQRGACVQGDCRPTGHRAFA
CACRPGWTGPLCDQRVDDPCQGNKCVHGACLAINSFSYSCRCRPGFVGVLCDEREASDAC
GPSRCKHGKCRVSGLGKVYCECDGGYAGEACDKEVACRGERLRDVYRRQRGYAACQTQEK
VSRLECRGGCPGAADGHGTCCAPLRSKRRKYTFRCADGSSFVQEVEKIVKCGCTKCPA
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atgctcggacgaggtgcgcggtcggccgtctcggctctggctctggctctggctctggct
ctggccctggttctggtcgcgtccggccggggcgccgccgcacagccgtgcccggcccag
tgctcctgcgccggcaccgcggtggactgtcacggccaaggactgcgcagcgtgcccagg
aatattccccgcagcgtcgagagactggatctgaacgccaacaacctgacgaaaatcacc
aaagccgattttgctggattgcgaaatttgcgcgtgctgcagctcatggagaacaaactc
agcaccatcgagcgaggcgctttccaggatctgaaggaactggagagactgcgtctgaac
cggaacaacctggccgtgtttcccgagcttctctttgtgggcacctcgaagcttcacaga
ctcgacctcagcgagaaccagattcaaggcgtgcccaggaaggccttcaggggagctgtg
gaaataaaaaatcttcagctggactacaaccacatcggctgcatcgaggacggcgccttc
agagccttgcgcgacctggaagtgctgaccctgaacaacaacaacatcagccggctgtcg
gtggccagtttcaaccacatgcccaagcttcggacctttcgcctgcactccaacaacctg
caatgtgactgccacgtggcctggctgtcggagtggctgcggcagcgcccccgcctgggc
ctctacacgcagtgcatgggcccgccgcacttgaggggccacaacgttgcagaagtgcag
aagaaggagtttgtctgcacgggttaccagtcgccgtcttcgtcctgcagcgtgttgcag
tgccccgagtcgtgcacctgcagcaacaacattgtggactgcagaggcaaaagtctgacg
gaaatacccggcaacctcccggaaaccatcaccgagatacgactggagcagaactccatc
aaggtgattccagccggcgctttttcgtcttataagaaactgcgccgaatagacttgagc
aacaatcagatttcagagttggctccagacgccttccaaggtctgcgctccctcaactct
ctagttctgtacggcaataaaataacggagatctccaaagggctcttcgagggcctcttt
tctctgcagctgctgttgctgaacgccaacaagatcgcgtgtctccgcgtggacgccttt
caggacctccacaacctcaaccttctgtcgctgtacgacaacaagctgcagaccatcgcc
aagggaaccttctcgtcgctgagggccatccagacgctccatctagcgcaaaaccccttc
atctgcgactgccacctgaagtggttggcggactacctgcaggacaatcccatcgagacc
agcggcgcccgctgcaccggcccccgccgtctggccaacaagcgaatcggacaaatcaag
agcaagaagttccgctgctcaggttcggaggattaccgcagcaagctgggaggggactgc
ttcgccgacctggcctgcccggagaagtgccgctgcgagggcaccacggtggactgctcc
aaccagaagctgagcaaaataccggaccacgtccctcaatacgccgccgaactgcgcctg
aacaacaatgaatttactgtgcttgaggccacagggatcttcaaaaagttaccccagctc
aggaagattaacctgagtaacaaccgcatcgccgacatcgaggagggcactttcgaagga
gcttctggggtcaatgagctcattttgacttccaacagattggaaaacgttcatcagcgc
atgctgacgggactcagtggcctgcgtacgctgatgctccggagcaaccgcatcggctgc
gtcagcaacagcagcttcggcggtctgagctcggtgcgcctgctgtcgctctacgacaac
cggatcacctcggtcagccccggcgccttcgacgcgctgcactcgctctccacgctcaac
ctcctggccaatcccttcgactgcaactgtcgtctggcctggctgggcgattggctgagg
aggaagcgcatcgtcacgggcaaccctcgctgccagagtccctacttcctgaaggagatc
cccatccaggacgtggccgtccaggactttgcttgcgaagacgggcgcgaggacgacagc
tgctctccggcgccgagatgcccggcggagtgctcctgcctggacacggtggtgcgctgc
agcaacaagggactcgccgccctgcccagaggcctccccaaagaaaccaccgagctctat
ctggacggcaaccgcttcacccaggtccccgcggagctctccgattacaaacgcttgacg
ctcattgatttgagtaacaaccagatcggcacgttgtccaaccacagcctcagtaacatg
tccgagctgcttaccctaatcctgagctacaaccgtctgcggtgcatccccgtgagggcc
ttcgacggactcaagtctctgcgtctgctgtctctgcacgggaacgacatatcgctgatc
ccggaaggagccttccaggacctgtcgtcgctttcgcacttggcgttgggcgccaacccg
ctgcactgcgactgccacatgcagtggttgtccgactgggtgaagagcggctacaaggag
cccggcatcgcccgctgcgccgggcccggcgacatgaccgacaagctgctgctcaccacg
ccgtccaagaagttcacctgcacaggcccggtggacgtcgccatccgggccaaatgcgag
ccctgcctgtcgagcccgtgcaagaacgacggcacctgctcggaagacccggtgcgctac
taccgctgcgcctgcccctacggctttaagggccagaactgcgaggagaccatccacgct
tgcatcggcgacccctgccacaacggaggaacttgtcatctcaaggaaggccaaggcacc
agtttttggtgcgtgtgtcccgagggcttcgagggcgactcttgcgagttcaacatcgac
gactgcgaagacaacgactgcgagaacaactccacgtgcgtggacggcatcaacaactac
acctgcatgtgctcgccggaatacacaggagagctctgcgaagagaaactcgatttctgc
gctcccgaattaaacccgtgtcagcaccattccaagtgcatcctgaccccgcacgggtac
aagtgtgagtgcggcccgggctacacgggagagcactgcgagctggacttggacgactgc
gacggacacaagtgtcagaacggcgctcagtgcgcggatgccgtcaacgggtacacctgc
gtgtgtccggagggctacagcgggttattctgcgacctttccccgccgatggtcctcccc
cgcaccagcccgtgcgacgaccacgactgcctgaacggggcgcagtgcgtcgtcacgggg
acggacccccgctgccaatgtctccacggctacgagggggagcgctgccagacgctggtc
agcgtcaacttcgtcgaccgccagtcttacctgcagctgccctccgatctgatctcgccg
ccgaccaacatcagcctgcaggtgcgaatgtcgtcggcctcgacgtggacgccccgtggc
caaaaaaatgctcacccgtgtccgttgctcttgttttcctttcagatcgctacagatgag
gacagcggagtcttattgtataagggagctaaggagcacatcgcgatggagctttatcgg
ggacgcgtgcgcgtcagctacgacacgggcacccaccccccctcggccatatacagcgtg
gagacggtgaacgacggcagtttccacgcggtggagttgctggcgtcggagcagactttg
tccctgtccatcgacggcgggccgcccaagtccatccgcggcgtcggcaaacagtccacg
ctcgacgtggagtccccgctttacctgggagggatgccggcgcgcgcctcggcatccggg
gggggcccgggcggccccgagggcagcagcttccgcggctgcctccggaacctctacgtc
aacggcgagctgcgggacctcgggtggcccggtcgaggggtggaaccggggtgccggccc
tgccagagaggggcctgcgtccagggggactgccgcccgacgggacatcgcgccttcgcc
tgcgcctgccgcccgggctggaccggaccgctctgcgaccagcgggtcgacgacccgtgc
cagggcaacaagtgtgtccacggagcgtgcctggccatcaactcgttctcgtactcctgc
cgctgccggcccggattcgtcggcgtcctctgcgacgagcgggaagcgtcggacgcgtgc
ggcccgtcccgctgcaagcacggcaaatgtcgagtgtcgggactgggcaaagtctactgc
gagtgtgacggcggctacgccggagaggcttgcgacaaagaggtggcctgccgaggcgaa
cggctccgagatgtctaccggcgacagcgaggctacgcggcgtgccaaacccaggagaag
gtctcccgtctagagtgcaggggcggctgcccgggggcggcggacggacacgggacctgc
tgcgcccccctccgcagcaagcgcaggaaatacaccttccggtgcgctgacggctcctcc
tttgttcaggaagtggagaaaattgtcaagtgtggctgtacaaagtgtcccgcatag
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