Syngnathoides biaculeatus (alligator pipefish): 133506014
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Entry
133506014 CDS
T09681
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133506014 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133506014 (zcchc7)
03016 Transfer RNA biogenesis [BR:
sbia03016
]
133506014 (zcchc7)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
133506014 (zcchc7)
Transfer RNA biogenesis [BR:
sbia03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
133506014 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Zn_ribbon_2
Motif
Other DBs
NCBI-GeneID:
133506014
NCBI-ProteinID:
XP_061685678
LinkDB
All DBs
Position
9:20975407..21010125
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AA seq
626 aa
AA seq
DB search
MYCSYQDRQELEDDLYREDEEESEGSEATSELEFHLYGQLHYSSNTGTTEGQDGEDRPRR
ELHASEKPTVTAVSVELEDSAKKRKASLNDKRVKQKKEKSCPQLRRPSSGFEQVIVIDSG
PEVITVSDDSSSSSSDDDEGVCALKGGIGGRALRSTPAQKAPRNKVTDITPVTLPSSSSE
ESESDWESYLSSDSDVLENWMILGRGNEDGDRSISLNLEGSTDNNADLEVDNDCSWLVSN
KDREAQIFNKERRARTAISRVANRYYTDKNVHCRNCDKTGHLSKNCPDPRKMPVCFLCGD
PSHVGSNCPFKHCNNCGLPGHLYDSCSERAYYHKRCHRCGMTGHFFDACPEIWRQYHIST
ETGPPFKQKGEDNGRSPAYCYNCSRKGHFGHGCTRQRMFRGTYATTPFINHYDTTEDINR
RQHRLKFKVKELKENGLMPNGSRTPCSPGPPKKKQKVVSPNNGHPFHRKAHRTWGCRAAT
PSHVFFHHGDDSRAAVFPKSKSFKGKQQESAGKRWKPKRAVPRERVVPPKLDCDEDADFP
RGRGAGEKTQQNDNSKKRKRKKDKEVSSAGLKETLRRTPPAGKSKKDKREQKRNQPHLKM
AAPIHPTDENLFNIKQRKRKRWHRAS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtactgcagctatcaggaccggcaggagttggaggatgatctctaccgggaagatgag
gaggaatctgaaggctcggaggccaccagcgagctggagtttcacctctacggtcagctc
cactactcttccaacacggggactactgaggggcaagatggagaggatcggcctcgccgg
gagctccacgccagcgaaaagccgacggtgacggccgtcagtgtcgaacttgaagactct
gccaaaaaacggaaagcatccttgaatgacaaacgtgtcaaacagaagaaggaaaaaagt
tgccctcaactgcgaagaccatcgtcgggatttgagcaggtcatcgtcatcgactccggc
cctgaggttataaccgtgtctgacgactcttcctcctcctcaagtgatgacgatgaagga
gtttgtgccttaaagggaggcattggaggtcgagcgctgaggtcgaccccggcccaaaag
gcaccccgtaacaaggtgaccgacatcactcccgtgactttgccttcaagcagctcagaa
gagtccgaatctgattgggaatcgtatctttcatccgactcggacgttctggagaactgg
atgatcctgggtcgaggcaatgaagatggcgaccgttccatttcgctcaacctggaaggt
tccaccgacaacaatgcagatttggaagtagataacgattgcagctggctggtttcgaat
aaggacagggaggctcaaatcttcaacaaagagaggcgagccagaacggccatatcgcgt
gtcgccaacagatattacaccgataagaatgtccactgccggaactgcgataaaactgga
catctatccaagaactgccctgatcccagaaagatgcccgtttgcttcctttgcggcgat
cccagccacgtaggcagcaactgtccctttaagcactgcaacaactgcggccttccgggt
cacctgtacgattcctgcagcgaaagggcctactatcacaaacgctgccatcgctgcggc
atgacgggccacttctttgacgcttgtccagagatctggagacagtatcacatctcgacc
gagacgggccctcctttcaagcagaagggggaggacaacggccgaagccccgcctactgc
tacaactgttccagaaaaggacacttcggccacggctgcacccggcagcggatgttcagg
gggacgtacgccaccacgcccttcatcaaccattacgacaccactgaggacatcaaccgt
agacagcacaggctgaagttcaaggtcaaagaactgaaggaaaacggcctgatgcccaac
ggttctcggaccccgtgtagcccgggaccgccgaagaagaagcaaaaagtcgtctctccc
aacaacggccaccccttccaccgtaaagctcacaggacttggggctgccgcgcagccact
cccagccatgttttttttcaccacggagacgactcgagggctgcagtatttccaaaaagt
aagtcgttcaagggcaagcaacaggagagcgccggcaaacggtggaagcccaagcgggcg
gtgcccagagagcgcgtcgtcccgcccaaactcgactgtgacgaggacgccgattttccg
agggggcggggcgccggggagaaaacgcaacagaacgacaacagcaaaaagaggaaacgg
aagaaggacaaagaagtttcatcggcgggcctcaaggaaactcttcggaggacaccacca
gccgggaagtcaaagaaagacaaacgtgaacagaaaagaaatcagccgcatctgaaaatg
gccgctccgatccatccgacggacgagaatctgtttaacatcaagcaaaggaaacgcaag
cgatggcaccgtgcgagctag
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