Syngnathoides biaculeatus (alligator pipefish): 133506084
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Entry
133506084 CDS
T09681
Symbol
pds5a
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A
KO
K11267
sister chromatid cohesion protein PDS5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
133506084 (pds5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133506084 (pds5a)
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133506084 (pds5a)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
133506084 (pds5a)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
133506084 (pds5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
TPR_Vitellogenin
Cnd1
Motif
Other DBs
NCBI-GeneID:
133506084
NCBI-ProteinID:
XP_061685821
LinkDB
All DBs
Position
9:complement(21149076..21182190)
Genome browser
AA seq
1284 aa
AA seq
DB search
MEFPQQQKPAADGKICYPPGVKEITDKISNDEVVKRLKMVVKTYMDMDQDSEEEKQQYLG
LALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHEKLKDIFLFITRQLKGLE
DTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFTQLFKTLFSVINNSHNQKVQMHMM
DLMCSIILEGDGVTQELLDSILINLIPAHKNLNKQAYDLARTILKRTVQTIETCIANFFN
QVLVMGKSSVSDLSEHVFDLIQELFSIDPLLLTSVMPQLEFKLKSNDGEERLAVVRLLAK
LFGAKDSELASHNRPLWQCFLGRFNDIHVPVRLECVKFASHCLMNHPDLARDLTEFLKVR
SHDPEEAIRHDVIVTIINAGKKDLNLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKK
YCLHHEAGKESAVMISWIKDKLLHIYYQNSIDDKLLVEKIFAQFMVPHSLETEEKMKCLY
YLYACLDTNAVKALNEMWKCQNMLRGLVKELLDLHKLPVSEANNTAMFGKLMNIAKNLPD
AGKAQDFMKKFNQVLGEDEKLRAQLEMLISPTCSCKQAEICVREITRKLTFPKQPTNPFL
EMVKFLLERIAPVHIDSEAISALVKLLNKSIEGTADDDEEGVTPDTAIRSGLELLKVLSF
THPTAFHSSETYESLLQCLKMEDDKVAEAAIQIFRNTGQKIETELPQIRSTLIPILHQKA
KRGTPHQAKQAVHCIHAIFNNKEVQLAQIFEPLSRSLNADIPEQLITPLVSLGHISMLAP
DQFASPMKSIVANFIVKDLLMNDRSVGNKNGKLWTTDEEVSPEVLAKVQAIKLLVRWLLG
MKNNQSKSANSTLRLLSAMLVSEGDLTEQKKISKSDMSRLRLAAGGAIMKLAQEPCYHEI
ITPEQFQLCGLVINDECYQVRQIFAQKLHLALAKLSLPLEYLAVFALCAKDPVKERRAHA
RQCLLKNISVRREYIKQNSLTQEKMLSFLPEYVVPFMIHLLAHDPDFTKPQEYDQLKDIK
ECLWFMLEVLMTKNENNSHAFLRKMVENIKRTKDAQCPEDAKANEKLYIVCDVALFVIAN
KSTACHLDCPSEPDICPKFFLPPDKDFRNDKDYLAADMRQMLLTGKPKPAPVLVTVNKTL
TVPGRKIFKTQVVSDPSNASTNSSPLSSSAVNKNSKSITATESAESRTQENNENPVVKKV
EPSKNVSPDVGTEAQPVKRRGRPPKMVTAASPAAAGKEAAPTGGGAGRGRKRGAEPNSNP
SAESIKMSKQQNDDGTNRQIDLQR
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccgcaacagcagaagccggcggccgacggcaagatctgctatcctcccgga
gtcaaagagattacggacaaaatcagcaacgatgaggtggtcaaacgcttaaagatggtg
gtgaaaacctacatggacatggatcaagattctgaggaggagaagcagcagtatctcggc
ctcgcgctccacctcgcctcagagttcttcctcaggaaccccaacaaagacgtgcgcttg
ctcgtggcctgctgcctggccgacatcttcaggatctatgcccccgaggccccctacacc
tcgcatgaaaaactcaaggatatcttccttttcatcactcgacagttgaagggactggaa
gacaccaagagccctcagtttaacagatacttttaccttctggagaatttggcctgggtt
aaatcctataacatttgctttgaactggaggactgcaatgagatcttcacccagcttttc
aaaaccctcttctctgtgatcaataacagccacaatcagaaagtgcagatgcacatgatg
gacctgatgtgttccatcatcttggagggcgacggagtcacacaggaactgttggacagc
atcctcattaacctcattcctgcgcacaagaatctgaacaaacaagcgtacgatctggcg
aggacgatcctgaagagaaccgtccagacgatagaaacgtgcattgcaaatttctttaat
caggttttagtgatgggcaagtcctccgtcagtgacctgtctgagcacgtctttgacctc
atccaagaacttttttccatcgatcctttgttgcttacctccgtgatgccacagctggaa
ttcaaactaaagagcaacgacggggaagagcggttggctgtcgtacgcttactagcaaag
ttgtttggggccaaagactctgagctggcctcgcataaccgacctctgtggcagtgcttc
ttaggacggttcaatgacatccacgttccggtgaggttagagtgtgtgaagtttgccagc
cactgtctcatgaaccacccggacctggcgagggaccttacagagtttttgaaagtgcgt
tcccacgaccccgaggaagccattcgtcacgacgtcatcgtcaccatcatcaacgctggg
aagaaggatcttaatttggtcaatgaccagctactgggcttcgtcagagagaggacgctg
gacaagcggtggcgagtccgcaaagaggcgatgatgggcctggctcagctttataaaaaa
tactgtttgcaccacgaagcggggaaggagtctgccgtgatgatcagctggatcaaagac
aagctgctgcatatctactaccagaacagcatcgatgacaagttattagtggaaaagatc
tttgcccagttcatggtcccccacagcctggaaacagaagaaaagatgaagtgtctctac
tatctgtatgcttgcctggacaccaatgctgtcaaggctttgaacgagatgtggaagtgt
cagaatatgctgagagggctggttaaagagctgcttgaccttcacaagctgccggtgtct
gaggccaataacaccgccatgttcgggaagctgatgaatattgcaaagaacttgccagat
gcgggaaaagctcaagatttcatgaagaagttcaaccaggttcttggtgaagacgagaag
ctcagagctcagctcgagatgctcatcagtccgacttgctcctgcaaacaagcggagatc
tgtgtgagggagatcacgcggaagttaacctttcccaaacaaccgaccaaccctttcttg
gagatggtcaagttcctgcttgaacgcatcgcccctgtccacatcgactctgaagccatc
agcgctttggtgaaactgctcaacaagtcgattgaaggcacagcggatgacgacgaggag
ggcgtgacccctgacacggccatccgctcgggcttggaactactcaaggttctgtcgttc
acacaccccacagcattccactcatcggagacctacgagtctcttctccagtgtctgaaa
atggaggacgacaaggtggccgaggcagcgatccagatatttagaaatactggacagaaa
atcgagacggaactcccgcagataagatcgactctaattcccatcctacaccagaaagcc
aaaagggggacgcctcaccaggccaagcaggctgtgcactgtatacacgccatcttcaac
aacaaggaagtgcagttggctcagatttttgagcctctgtcacggagtctaaacgccgac
attcccgagcagctcatcacgcccctcgtgtcactgggccacatctccatgctggcgcca
gatcagtttgcctcaccaatgaagtccatagtggccaacttcattgtcaaagacttgcta
atgaatgacaggtcggtgggaaacaagaatggcaagctgtggaccactgacgaggaagtt
tcacccgaagttctggctaaggttcaggccatcaagctgctggtgcgttggttactagga
atgaagaacaaccaatccaagtcggcaaattccacgttacgcttgctgtcggccatgctg
gtcagtgagggagacctcacggagcaaaaaaaaatcagtaaatcggacatgtctcgccta
aggctggcagcaggtggcgccattatgaagctggctcaggagccttgttaccatgaaatc
atcacacccgaacagttccagctgtgtggcctcgtcatcaatgacgagtgctaccaggtg
cgacagatctttgctcaaaagttgcacttggcgctcgctaaactgtccctgccgctggag
tacctggcagtcttcgccctgtgtgccaaggacccggtgaaggagcgccgcgcccacgcc
cgacagtgcctactcaagaacatctcagtgcgcagagagtacatcaagcagaactcgctc
actcaggaaaaaatgctctccttcctcccggagtacgttgttccgttcatgatccacctg
ctggctcacgacccggacttcacgaaaccgcaggaatacgaccagctcaaagacatcaaa
gagtgtctgtggttcatgctggaggtgctgatgaccaagaacgagaacaatagccacgcc
ttcctcaggaagatggtggagaacatcaaacggaccaaagatgcgcaatgtcccgaagac
gcaaaagccaacgagaagctgtacatcgtgtgtgacgtggcgctcttcgtcatcgccaac
aagagcaccgcgtgtcacctggactgcccgagcgagcccgatatttgccccaaattcttc
ctgccgccagacaaggacttcagaaatgacaaagattatctggcagcagacatgcgacaa
atgttgctcaccggaaagcctaaaccggctccggtgctggtgaccgtcaacaaaactctc
accgtaccgggcaggaagatcttcaagactcaggtcgtctcggatccgagtaacgccagc
accaactcgtcgccgctaagctcctcggcggtcaacaagaacagtaaaagcatcacagcc
acagagtcggcagagagccgcacgcaagaaaataacgagaatccggtcgtcaagaaggtg
gagccgagtaagaacgtcagccccgacgtcgggacggaagcccagcccgttaaacggcgc
ggccggccacccaaaatggtaacggccgcttcgcccgcggcggccggcaaagaggcggcg
ccgacgggaggcggggccgggaggggcaggaagagaggggcggagcccaactccaacccg
tcggcggagtccatcaagatgtccaagcagcagaacgacgacgggacaaatcgacagatc
gacctgcagaggtaa
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