Syngnathoides biaculeatus (alligator pipefish): 133506099
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Entry
133506099 CDS
T09681
Name
(RefSeq) PDZ and LIM domain protein 3-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133506099
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
133506099
Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
133506099
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
133506099
NCBI-ProteinID:
XP_061685852
LinkDB
All DBs
Position
9:17192475..17205688
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AA seq
308 aa
AA seq
DB search
MPFKVVLNGPAPWGFRLVGGKDFNQPLTISRITPGSKAALANLCPGDLVVAIEGASSADM
LHCDAQNKIKEAADHLTLTVERSEAKLWSPRLTEDGKVNPFKINLEAEPQDYKPIGVAHN
RRAQPFVAAANIDDTRQVVSTTYNTPIGLYSSGNIQDAMEGQMKGLVQPKPNSPRTLANI
EDSDVYRMLQHDYEEPEQPRQSGSFKALQEYIESDGTKPMVTRTVKAPTTKPSAPAGNLQ
KLPICDKCGNGVVGTVVKARDKFRHPTCFVCADCDVNLKQKGYFFVGGELYCEAHARART
RPPESQDL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcaaggtggtcctaaacggaccggccccctgggggttccgtctggtgggcggc
aaggacttcaaccagccactgaccatctcaaggatcacgcccggcagcaaggcagcgctg
gccaacctttgccccggcgacctggtcgtggccatcgagggcgcgtcctccgccgacatg
ctgcactgtgacgcgcagaacaaaatcaaagaggccgccgatcacctcacgctcactgtg
gaaagaagcgaggctaaactgtggtccccgcgcttgacggaggacggcaaagtcaacccc
tttaagatcaacctggaagccgagccccaggactacaagcccatcggcgtggcgcacaac
cggcgagctcagccgttcgtggcggcggccaacatcgacgacacgcgccaggtggtcagc
accacctacaacacccccattggactctactcttccggaaacatccaggacgccatggag
gggcagatgaaagggctcgtgcagcccaagcccaacagcccgaggaccttggctaacatc
gaggattccgacgtctaccgcatgctgcagcacgactacgaggaaccggagcaaccgcgc
cagtcgggatccttcaaggcgctgcaggaatatatcgagagcgacgggaccaaaccaatg
gtgaccaggacggtgaaggcccccaccaccaagcccagcgcacctgctggaaacctgcag
aaacttcccatctgcgacaagtgtggaaatggcgtcgttggcacggtggtgaaggctcgc
gacaagttccgccacccgacttgcttcgtgtgcgccgactgcgacgtcaacctgaagcag
aaaggttacttcttcgtggggggggagctgtactgcgaggcgcacgcccgcgccaggacc
agaccccccgagagtcaagacctgtag
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