Syngnathoides biaculeatus (alligator pipefish): 133506138
Help
Entry
133506138 CDS
T09681
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
133506138
NCBI-ProteinID:
XP_061685946
LinkDB
All DBs
Position
2:complement(7984031..7998412)
Genome browser
AA seq
727 aa
AA seq
DB search
MNPKILHHIHLLITVFHLACGGAFSRSKTKSQQHQVQLQYNDGHPQQPFIGNEMPLLGQY
GMELPQLPFELGKERLSTERKGQTFARGAKGPPPPGPDGEGYRIGPQGVQGPPGPPGPPG
LPGQGLPGLPGKAGPTGPQGYPGIGKPGIPGLPGKPGGPGLPGPQGVPGPNGHEGPNGLP
GPQGLPGPPGLPGISKPGGQGLPGQVGIHGEPGQRGSSGPPGQPGPRGEKGLGIPGLPGL
KGPTGPPGPPGHAGIPGIGKPGVSGLPGEPGMPGKAGPHGGRGPVGPPGERGHPGPPGSM
GIGKPGKDGFTGQPGLPGGKGEPGFPGLPGSPGLPGYGKQGFPGPKGQKGHNGFPGSLGT
KGEKGHGGLPGMNGPSGSSGRPGPPGPMGPSGSIGFPGQKGEDGDGGPKGNPGLKGDLGL
QGHPGQQGFIGEVGQPGLRGFQGPTGPKGEPGNRGLFGPPGTAGIPGPRGVAGQSGDKGP
QGPQGIPGLSGPGGPIGPPGMPGQKGETGPPGVPGYPGEGIPGPAGQIGPKGSSGPLGPH
GIPGQPGQPGPPGPPGPPATYPDLGHTLPLSGPYNGQQQAFKKTKNGGYTGENVLEIPAF
TVKRIDPFPPVGSPVIFDKVLHNSNQDYSPQSGVFTCSVPGVYYFAYHVHCKGSNVWVAL
MKNNKPMLYTYDECTKGLLDQASGSAVLPLQQADTVHVQLPSDQAAGLYASQYVHATFSG
HLLYQFN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctaaaatcctccatcacatccacctactcatcactgtgttccatctggcctgc
ggtggcgcattctccagaagcaaaacaaagtcgcaacaacaccaggtccaactacagtac
aatgatggccatccacagcagcccttcatagggaatgagatgcctttattgggtcagtac
ggtatggagctccctcagcttccatttgaactgggcaaagaacggctatcgacagaacgc
aaaggacaaacattcgccagaggagccaaaggtccacctccccctggtcccgatggagaa
ggctaccgcattggacctcagggagttcagggcccaccggggcctccaggaccaccaggg
ctgccaggacagggattgccaggattaccaggaaaagcaggtcctactggtcctcaaggg
tacccaggaatagggaaaccaggaattccaggattgcctgggaaaccaggaggacctgga
ttgcctgggccacaaggtgtcccaggacctaatggtcatgaaggaccaaatggtcttcct
ggtcctcaaggacttccaggtccacctggcctccctggaatttcaaagccaggaggtcaa
ggtctgccagggcaagtgggcattcatggggagccaggccaaagaggttcttcagggcct
cctggccaaccaggccccagaggagaaaaaggacttggcatacctggtttgcctgggttg
aaaggacctactggacccccagggccacctggacatgctggaattccagggattggcaaa
cctggtgtgagtggtcttccaggagagccaggaatgccaggaaaagctggacctcatggt
ggacgaggaccagtgggaccacctggtgagagaggccacccagggccacctggctcaatg
ggaattggaaaaccagggaaggatggatttacaggccaaccagggcttcctggaggcaaa
ggtgaaccaggctttccagggttaccaggaagtccaggtttgcctggttatgggaaacaa
ggctttccaggaccaaaaggtcaaaagggacacaatggttttcctggatcgctgggtaca
aaaggagaaaaaggtcatggaggccttccaggcatgaatggtccttcaggttctagtggt
agacctggtccaccaggcccaatggggccctcgggtagtattgggttcccaggacagaag
ggagaagatggtgacggtgggccaaaaggaaatcctggattaaaaggggatttaggatta
caaggccatcctggacagcaaggcttcataggtgaggtagggcaacctggactgagagga
tttcaaggaccaactggccccaaaggcgaaccaggtaacaggggtttatttggccctcct
ggtacagcaggaatacctgggcctagaggagtggcaggacaatctggtgataaaggcccc
cagggaccacaaggaattccaggactttcaggaccaggtggaccaattggacctcctgga
atgccaggtcaaaaaggagaaacaggccctcctggggtacctggctatcctggtgaggga
atacctggacctgctggtcagattggtcctaagggaagctctggccctctcgggcctcac
ggaatacctggccaaccaggccaacctggaccacctggacctccaggaccccctgcgaca
taccctgaccttggacacactcttccactatcgggtccatacaatggtcaacaacaagca
ttcaaaaagacaaagaatggtggttacaccggtgaaaatgtcttggagataccagcgttc
actgtaaagcgcatcgatcctttccctcctgttgggtctcctgtgattttcgacaaagtc
ttgcacaacagtaatcaggactacagtcctcaaagtggtgtttttacatgcagcgtaccc
ggagtttactattttgcttaccatgtccactgcaaagggagtaatgtttgggtggcactt
atgaagaacaataagcccatgctgtacacttacgatgagtgcaccaagggcttgctagat
caggcatcaggcagcgctgtcctccctttacagcaggctgacactgtgcatgtacagctc
ccatctgaccaggcagcaggactttatgctagtcagtatgtccatgcaacattttctgga
cacttattgtaccaatttaattga
DBGET
integrated database retrieval system
