Syngnathoides biaculeatus (alligator pipefish): 133506252
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Entry
133506252 CDS
T09681
Symbol
rims1b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133506252 (rims1b)
Membrane trafficking [BR:
sbia04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
133506252 (rims1b)
Small GTPases and associated proteins
Rab associated proteins
133506252 (rims1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
133506252
NCBI-ProteinID:
XP_061686193
LinkDB
All DBs
Position
9:complement(26957917..27102981)
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AA seq
1501 aa
AA seq
DB search
MSATVGPRSGPRPPTVPPSMPDLPDLSHLTEEEREIIMAVMARQKEEEEKEQAMLKTLHQ
QFESYKQEVRRIGAETRRQQTQQKDDAPTCGICRKTKFADGCGHLCSYCQTKFCARCGGR
VSLRSNNIMWVCNLCRKQQEILTKSGEWFSESGVRPGNLGSTLNNPAMGGEIQRDRKLLR
SKCQGLSSTTKSNTELPHGTQGPAGNTASLAPDTMPGTRSQSVPPREKKRPISYHEQNGS
GVLDRGTGRRSAGKLPSQSSLDERVSPGDRRERQPRDSHKLQKIHSQDYNDEEDNLGHLE
KKRRRPEDDEQKERQRREEEFQNRYRSDPNLARYPVKPQKEEQEMRMHAKVSKVRHERRH
SDLAINEVGLGPGEGGGCDVQVTENRLTRRGNRKTQIENYCANSVERTVGDLGGLASPDK
KGCFEPGLAHTARDKGGDKLLRKDSRSLEQSESLWPPPSRSYKSKRGLNKRQLSISSSEE
EGGSTPEYTSCEDVDMESISEKGDWDCHPLDPTVWHHPVTWQPSKEGDHLIGHITLSKRS
AVPREAGSLLGLKVVGGKITETGRLGAFITKVKKGSLADVVGHLRAGDEVLQWNGKSLPG
ATKKEVYNIILESKAEPQVELVVSRPIGDIPRIPESSHPPLESTGSSSFESQKMDRPSIS
VMSPTSPGTLRDLPLVLPGQLSVKLWYDKVGHQLIVNVLQAIDLPSRPDGRPRNPYVKMY
FLPDRSDKSKRRTKTVKKSVEPKWNQTFIYSHVHRRDFRERMLEITVWDQPRVQEEESEF
MGEILIELETALLDDIPHWYKLQAHDVSSIPLPQPSPYLPRRHVRGDSPSKKLQRGERSS
RERERGSTLAVPEQQRALQHRSRSVSPHREDSCRVRSRAAYVPMQRSLDEIHQNRQHSQS
PSHHHNTHLEHQRSGDSDYEYSEDSEALEMHRSIRGGSAECLHTNSSTLPACLKSKLPQR
QEGGNKTHHRIFAHRVLRFTDEVTVSDLQPSLDRVRSASTTCLRPETAFHSPDTDRTHPH
GSPSSPVGTTSSGRRGRQLPQLPAKSSSIEQALAVEERARQLHMKVHSYRPSASHDPESD
LKNKREKFAEQRRSSDNMSARSSDSDMSDMSALSHASSASHLSSTSYMSIQSERPGGRLR
SKSLEEEKKDRRISWGVTREEERKRAAGKRHFSEELKRRRHTVAGETEESSRQMRASAGR
SMLKSSSVSGEIYTQERTDGSQSDTALGTVGGGSKKRRSSLSARVVAIVGNRRSRSTSQI
SGPEAKTKKEKGAPIQRSTETGMAVELTRNMSRQPSRESNNGSMNSYNSEGNIFSGVNLG
ASSQFSDFLDGLGPAQLVGRQTLATPAIGDIQIGMMEKKGQLEVEVIRARGLVQKPGSKS
LPAPYVKVYLLNNGAYVAKKKTKIARKTLDPLYQQALLFEESPQGKVLQVIVWGDYGRMD
HKSFMGVAQILLEELDLSSTVIGWYKLFPPSSLVDPTLASLTRRASQSSLDSSSGPHGVR
S
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaacggtggggccacggagcggccctcgcccacccaccgtgccgccatcaatg
ccggatctgccggacttgagccatctcaccgaggaggagcgggaaatcattatggcagtg
atggctcgccaaaaggaagaagaggagaaagaacaagccatgttaaaaacactgcaccag
cagtttgaaagctataaacaggaggtgcgacgcattggcgcagagacacggcgtcagcag
acacaacagaaggatgacgcacccacctgtggcatttgccggaagaccaagttcgcagat
ggctgtggtcacctgtgctcctattgtcaaaccaaattctgtgcccgttgtgggggccga
gtctccctgcgctccaacaatataatgtgggtatgcaacctgtgccgtaagcagcaggag
attctcaccaaatcaggagaatggttttcagagtcaggagtccggcctgggaacctggga
tccaccttgaataacccagccatggggggtgagatccaacgggataggaagctactccgc
tccaagtgtcaaggcttgtcctctacaactaaaagcaatacagagctgccacacgggaca
caagggcctgctggcaatactgcctctctggctccagacaccatgcccgggactcgctcc
caaagtgtaccacctcgagaaaaaaaaaggccaatttcctaccatgaacaaaatggtagt
ggagtcctggatcgtgggaccggccggaggtctgctggaaagttgccatcgcagtcatct
ttggacgagagagtcagccctggcgaccgacgagagagacagccaagagatagtcacaag
ctgcaaaagatccattctcaggactataatgatgaggaggacaacttgggccatttagaa
aaaaaaaggagacgaccagaggatgatgaacagaaggagcggcagcgacgtgaggaggag
ttccagaaccgttaccgtagtgaccccaaccttgctcgataccctgttaagccacaaaag
gaggaacaggagatgcgtatgcatgccaaggtatctaaggtccggcacgaacgtagacat
agtgatcttgcaatcaatgaggtcggactggggcctggtgaaggaggaggctgtgacgtg
caggtgactgaaaaccgtctgaccaggagaggaaaccgcaaaactcaaatagaaaactat
tgtgcgaactctgtggaaaggaccgtgggagacctagggggactggcatctcctgataag
aagggttgctttgagccaggtttagctcacacggcaagagacaaaggtggggacaagttg
ttgaggaaggactctagaagtttggaacagtccgagtctttgtggccgcccccttcgcgg
tcgtacaagagcaagcgcggactaaacaagaggcagctgtccatcagcagctcagaggag
gagggcggctccacgcccgagtacaccagctgtgaggacgtggacatggaaagcatcagt
gagaaaggtgattgggactgtcatccgcttgatccaacagtgtggcatcatcccgtaacg
tggcagccttcgaaagaaggcgatcatctgattggacacatcacactaagcaagagatct
gctgtgccacgagaagctggttccctccttggtctaaaagttgtaggtgggaagattaca
gagaccggaagactaggggccttcatcaccaaagtaaaaaaaggaagcctggccgatgtc
gtgggacatcttagagcaggtgatgaggtactgcagtggaatggaaagtcattgccaggc
gcaaccaagaaagaggtgtataacataattcttgaatctaaagctgaacctcaagtggaa
cttgttgtttcaagacccataggggatattcctagaatcccagagtcatctcatcctcct
cttgaatcaacaggttctagttcctttgagtcacagaaaatggaccgtccctctatatca
gtgatgtccccaacaagcccaggaaccctcagagaccttcctctggtgctccctggacaa
ctgtcggtgaaactttggtatgacaaagtaggccatcaactcatcgtcaacgtccttcaa
gccatagacctgccatcccgaccggatggacgacctcggaacccgtatgtcaagatgtac
ttcctcccagatagaagtgacaagagtaaacgtcggactaaaaccgtgaaaaagagtgta
gagcccaagtggaatcagaccttcatatattcacatgttcaccgcagagattttcgtgag
cgcatgctagagatcaccgtatgggaccaacccagggtccaggaagaggaaagtgaattc
atgggggagatcctgatagagttggagactgccttgctggatgacattcctcattggtat
aaactccaggcacatgatgtgtcctcgatacctttgcctcagccttctccatatcttcca
cggagacacgttcgcggagacagcccgagcaaaaaactacagagaggagaacgtagttcg
agggaacgagagcgaggcagtacgttggctgtgcctgaacagcagcgtgccctccagcat
cgctctcgctctgtatctcctcaccgagaagattcgtgcagggtgaggtcgcgggctgca
tatgtgcccatgcaaaggagcctggatgagattcatcagaatcgccagcattctcagtca
ccttcccatcaccacaatacccatttggagcaccaacgctctggtgactcagactacgag
tactctgaagacagtgaggccctggagatgcacaggtcaatccgaggcggaagtgcagag
tgcctacacacaaacagctccaccctccctgcatgcttaaagagcaagctgccacaaagg
caagaggggggcaacaagacgcatcatagaatctttgcacaccgtgtgctcaggttcact
gatgaggtcacagttagtgacctgcagccatcgttggatagagtgaggagtgccagcacc
acatgtttgagaccagaaaccgcctttcactctcctgacacagacagaacacaccctcac
ggtagcccatcctccccagtggggaccacctcatcaggtcgcaggggccggcagcttccg
cagctcccggctaaaagcagcagcatagaacaagcccttgcagttgaagagcgagcccga
cagctgcatatgaaagtacattcctaccggccttcagcctctcacgaccctgagtcagac
ctcaagaataaacgggagaagtttgcagaacagcgacgaagcagcgacaacatgtctgca
aggtcatcagacagcgatatgagcgatatgtcagctctctcccatgccagcagtgcctct
cacctcagtagcaccagctacatgtctatccagtcagaacgccctgggggacgtcttagg
tctaagtcattagaggaggaaaaaaaagacagacggatttcatggggggttacgagggaa
gaggagaggaagagggcagcaggaaagagacatttctcagaggagttgaagcgcaggaga
cacactgtagcaggagaaactgaggagtccagtcggcagatgagggcatcagcaggacgg
agcatgctcaagagctccagtgtgagtggggagatctatacccaggaacgcacagatggg
agccaatcagatacagcactcggcacagtgggtggaggcagcaagaagagacgctcaagc
ctcagtgcacgggtggtggcaattgttggaaatcgccggagccgtagcacttcccagata
agtggcccagaggcaaagactaaaaaagagaaaggagcaccaattcaaaggagcactgag
accggtatggcagtggaactgactaggaatatgagccggcagcccagcagagagtccaac
aatggcagtatgaacagttacaactcggaggggaatatcttttctggggtcaatctggga
gccagcagccagttcagtgactttctggatggcctgggtccggctcagttagtgggcagg
caaacactggctacacctgcaataggtgacatccagataggtatgatggagaaaaagggt
cagctggaggtggaagttatcagagcgcgaggtcttgtgcaaaagccaggatcgaaatct
ctaccagcgccttatgtcaaggtgtatctgctgaataatggagcatacgtagccaaaaag
aaaacaaagattgcacggaaaacacttgacccactgtaccagcaagcattgctgttcgaa
gaaagtccacaaggaaaagtcttacaggtgattgtatggggagattatggccgcatggac
cataaaagcttcatgggagttgcacaaatcctccttgaggagctggacttatcaagcaca
gtaattggttggtataagttgttcccaccttcttctttggtggatccaactcttgcttcc
ctcacacgaagagcttctcagtcttcgctcgacagctcctctggaccacacggggtccga
tcatag
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