Syngnathoides biaculeatus (alligator pipefish): 133506365
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Entry
133506365 CDS
T09681
Symbol
obsl1a
Name
(RefSeq) obscurin-like protein 1a
KO
K19574
obscurin-like protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133506365 (obsl1a)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
133506365 (obsl1a)
BRITE hierarchy
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_6
Izumo-Ig
Ig_4
C1-set
C2-set_2
VEGFR-1-like_Ig-like
Adeno_E3_CR1
fn3
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
133506365
NCBI-ProteinID:
XP_061686423
LinkDB
All DBs
Position
2:8277077..8290897
Genome browser
AA seq
2003 aa
AA seq
DB search
MDIFGGAPRVLGYPRPVVVQCGADATLKCQIGGEPRPDVIWECKNVQIVTEGRYKLSEEG
KFYLLSISGVSVMDAGQYICKARNSVGETYAAASLKVVEKDKQLENNGIKQHKTEHGHVN
GVSNLENGDHSEENGAQDVDFTSDDRPRFLIKPLSLRVDRGQDAAFSCKVWGTPLPEVVW
EKDGKKLNDIFESSHFSISVQDGGWFQLKVYRTRIPDKGVYTCKAMNRNGEALAGAVLLV
DPVPERGDSTKSSHWSPKDRGGKLSLSKLREEPPASTTKVKKFVVAEGKHAKFRCFVTGK
PKPEIIWKKDGSPLDPGRRHRIFEDREGYYTLKVLYCKIQDTGLYACVASNALGNTLSAV
HLSVKGPHVRFKHPLKDVEAKERNVAVLECEVPNESVLTTWYREDERLMPSNKYGIEQQG
TRRRLTIKDVEIDDDGVYFCEMQDGGKSIAELSVKGKILRKLPRKVEVLEGENATFFVEV
EDDDMEIHWFKNGQKLHETHQTILKTFGNTHVLAFVNVVHQDSGVVTFVTGRSKTSSRLK
VRDTRHCPPICPLGVKMDLDGPNGAVLSWVPAPNNQTTRSIFVVERQEVGSQEWQKCFTS
EKATSTEISSDSVPYKADYRFRVCCINKYGRSGHVEFPKAVHLVPGTKICSPLQDLEVTE
GEDAVFSIVLSASLVGTWFLNSAQLQDGGRYSVKQSKTQHTLVIHETFSAEDKAEITFIA
NGLRNSATLMVKPAVMKFNPLLEFDSTKRVQTGDIFVLYCEVSHPSAKVCWYKDGEELQM
SDVLNIQSDGNMRRIVIQSAEKHHAGVYTCQTSGDVITFMVEVTGPPVEFIPGPEEDLHK
NSMELDPVVLLCRVSREDAQVMWYKDGCQIEPSDNITLQTEGTLRRLIIRSVETSDAGSY
TCQVENNTMEFSVNVKEPPVMIVDPKDDVIMERYISEDIHMQCELSRTGGKVQWFKNGEE
VEEGGNIQLTREGPYRCLTILRSKVEDGGEYICETNGDSVFFQLIVTKPPVRIISPTDSE
LKITHLASTKLQLSCKISCSDAHVTWYKDSLEVEEGPNLILEVEGAERRLVIPMASIKDA
GEFVCETEHDSVAFMVTIKEQPVVLSRLTNTSEKLQCLAGKNVVLEVKVSRLNAEVKWVL
NDQEIEGSDFVTITKNELLRRLEMHSPSPADSGTYSCDAVDDKLDFEVTILEPPVNILKK
SEIDTNLKILRSDDVVLECELSRGNAKSKWYKDGCRIECDGRFCEEEEGAFRSLVILNAE
LEDSGEYFLDAEDDNITFQVTVQEPPVTIVGNSKDADFQEMASGEELILACEVSHENAPV
QWYCNDKVLVSDSRTNIESYGTLRKIIISNVQPSDSGKYICDAVDDKMISIVRIQVPRVV
EFLTELQNTTVLEGEDATFKCVISPENVQMVWFMDNEVINPSDRVQITQNGLCHTLVIRK
CRMLDCSKITAEAEGTTSKASLRVQEAQVMFTKKMEAVTAEEFADATLETEISLETGEVQ
WMRQGVVIQPGSRYSLNQNECKRSLTIHNLNLSDRGTYRCETLHDRTQVKLNVEPRKISI
RKGLADQETLERETASFEVELSHPDVQGNWQKDGIRVKPNNQLRVSTNGRVHGLTLSNLT
LEDTCTIAFSAEGVRTTARLTVKETPVTIIKALVDVRVEEEFPATLECELSRQNTEVRWF
KSGTELKPGRNCRIYSMGRNKFCQILQCSLADSGIYTCDVGERTSSCSLDVYEHELKILQ
DLEDLHIQEDQNAVFMCEVSLKDAIGEWYKDGYKIRPTSTIKTRTEGTKHFLLMCNVKAE
DAGEIRFVSRDTESTAYLEVEEPPVSIVKPLRDRTALEKHRVILECTVSSARCTATWYRG
KERLVPSDRVDLVVDGCSHKLVIQEVELEDEGIYSIEVGLHSSKAKLMVEAQELVVVQEL
EDVEVDENEPAVFQCEVSVAISRTPVWTLNGENIKPGPSIRLENHGTVHKLTLKHTKVDL
SGVVKFSVGKAKTSAILNVRECK
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atggacatttttggaggcgcgcctcgggttttgggctacccgcgacctgtggtggtacaa
tgcggtgctgatgccactcttaagtgccaaatcggcggagagcctcgtcctgatgttata
tgggagtgcaaaaatgtccagatcgtcactgaaggacgctacaagctctccgaggaagga
aaattctacctgttgagcatcagtggtgtgagcgtgatggatgctggccaatacatttgc
aaagccagaaacagtgtcggggaaacttatgctgcagcctccctcaaagttgtggaaaag
gacaagcaactggaaaataatggcatcaagcagcacaagacagaacatgggcatgtaaat
ggagtcagcaacttggagaatggagaccacagtgaagagaacggagcacaggatgttgac
ttcacatctgatgatagaccgaggttcctcatcaaacccctatcattgcgagtggacaga
ggacaggacgctgccttctcttgcaaggtttggggcacgcctttgccagaagtagtatgg
gaaaaagatggcaagaaattgaatgacatctttgagagctctcacttctctattagcgtt
caagacggaggatggttccagcttaaggtttaccgaacacgcattcctgataaaggcgtc
tacacctgcaaggccatgaaccgcaatggcgaggccctggctggggccgtcctccttgtt
gaccctgtgccagagcgaggggacagcacaaagtccagccattggtcaccaaaagacaga
ggggggaagctcagtttgtcaaagctcagggaggagccaccggccagtacaacaaaggtc
aagaagtttgtcgtggcagaagggaaacacgccaagttccgctgctttgtcacagggaag
cccaagccagagatcatctggaagaaggatggatcacccctcgatcctgggaggcgccat
cgcatatttgaagacagagaaggttattacacgctgaaggttttgtattgtaaaattcag
gacacgggactgtatgcgtgtgtagcatccaatgctcttggaaacactctcagtgccgtt
catctgtcagtcaaaggtccacatgtgagatttaagcatccgttaaaagatgtggaggca
aaggagaggaatgttgctgttctggaatgtgaagttcctaatgagtcagtcctgaccacc
tggtaccgtgaggatgaaagactgatgcccagcaataaatatgggattgagcagcaaggc
actaggcgaagactcaccatcaaagatgtggaaatagacgatgacggagtgtatttctgt
gagatgcaagatgggggaaagagcatagcagaactgtcagtcaaaggtaaaatcctacgt
aaacttccgcgaaaggtggaggtgttggagggtgagaatgctacattctttgtggaagta
gaggacgatgacatggagatccattggttcaaaaatgggcaaaaactgcatgagacacac
cagacaattcttaaaacttttggaaatactcacgttcttgcctttgttaatgtggtccac
caagactcaggggtggtgacttttgttactggacgatccaagacatcatcacgtcttaaa
gtcagagacacaagacactgcccaccaatctgtccgcttggagtcaaaatggatctggat
gggccaaatggcgctgtgctatcctgggttcctgcaccaaacaaccagacaactcgctcc
atttttgtagtggagagacaggaagtgggctcacaagaatggcagaaatgctttacctct
gagaaagccacctccactgagatctccagtgacagtgtaccatacaaggcagactaccgc
tttagagtctgttgtatcaacaagtatggccgcagtggccatgtagagtttcccaaagct
gtccatctggttccagggacaaagatttgcagtccccttcaggacctggaggttacagaa
ggagaagatgctgtcttttccatcgtgttgtcagcctcactcgttggtacctggtttttg
aacagtgcgcaactgcaagacggtggaagatactcagtaaaacagtccaaaacacagcac
acattggttatccatgaaactttcagtgcagaggacaaggcagagatcacatttattgcc
aatgggttgcgaaattcagcgacgctcatggttaaacccgcagtcatgaaattcaaccct
ttgttggaatttgacagtaccaagagggtacagaccggtgacatctttgtcctctactgc
gaagtatcacatccttcagctaaagtatgttggtacaaagacggtgaggagctccagatg
agcgatgtcctgaacattcaatcagatgggaatatgaggagaattgtgattcagtcagct
gagaaacatcatgctggagtttatacgtgccagacatcaggcgatgtcatcacatttatg
gttgaagttacaggccctcctgtggaattcattccaggacctgaggaagaccttcataaa
aacagcatggagcttgaccctgtggtgctgctctgccgtgtctccagagaggatgctcaa
gttatgtggtacaaggacggttgtcaaattgaacccagtgacaacatcactctacagaca
gagggaaccctaagaaggctgattatccgctctgttgaaacctctgatgcaggcagctac
acctgccaagtggaaaacaacaccatggagttttctgtcaatgtcaaagaacccccagtg
atgattgtggaccctaaagatgacgtcataatggagcgatacatttcggaagacattcac
atgcagtgcgagttgtcccgcacaggcggaaaggtgcagtggttcaagaatggtgaggag
gtggaggagggcggcaatatccagctgacaagagagggtccctacagatgcctgaccatc
ctccgcagcaaggtggaggatgggggggagtacatctgtgagacaaatggggactctgta
ttctttcaactgattgtcacaaagcctcccgtacgaatcatttcccccactgattcggag
cttaaaatcacccacctggcgtccaccaagctacagctcagctgtaagatctcgtgttct
gacgctcatgtcacgtggtacaaagacagtctggaggtagaggagggtccaaacctcata
ctggaagtggagggggcagaacgtcggctggttattcctatggcctccataaaggatgca
ggagagtttgtatgtgagactgaacatgactctgttgccttcatggtgacaattaaagag
caaccagtggtactttcccgtcttacaaacacatcggagaagctgcagtgtttagcaggg
aaaaatgttgtactggaagtcaaagtatcacgcctcaatgctgaagtgaaatgggtgcta
aatgatcaagaaatagaagggagtgattttgtgaccatcacaaagaatgaattacttcgt
cgtcttgaaatgcactctccttctccagcggattccggcacatacagctgcgatgctgtc
gatgacaagcttgactttgaggtcacaattttagagccaccagtgaatatcttaaagaag
tccgagattgacacaaacctcaaaattctgaggtctgatgacgttgtactggagtgtgag
ctctccagaggcaatgccaaaagcaaatggtacaaggacggctgtcgtattgagtgtgac
ggaagattctgtgaggaggaagaaggcgcttttcgctctcttgtgattctcaatgctgag
cttgaagactctggggaatactttctggatgctgaagacgataacatcaccttccaggtt
acagttcaagaacctccagtgaccattgtaggaaactctaaagacgctgatttccaggag
atggcatcaggcgaggagctaatcctggcttgtgaggtgtcccatgaaaatgcgcctgtc
cagtggtactgcaatgacaaggtgcttgtcagtgactcccgtaccaatatagaaagctac
gggactctgaggaaaatcatcatttcgaatgttcagccttcggattccggaaagtatata
tgtgatgcagtcgacgacaagatgatcagtattgttagaatccaagtgcctcgggtggtt
gagttcctgactgagcttcagaacacaactgttctggaaggagaagatgcgacctttaaa
tgtgtaatttcacctgagaatgtgcagatggtctggttcatggacaacgaggtgatcaac
cccagcgaccgtgtccagatcacacagaatggtctgtgccacaccttagtgataagaaag
tgccgcatgttggactgttccaaaatcacagctgaagccgaagggacaacaagcaaagct
agcctcagagttcaagaggctcaggttatgttcacaaaaaaaatggaggctgtcacggca
gaagagttcgctgatgccaccctggagacggagatcagccttgagacgggcgaagtgcaa
tggatgagacagggggtggttatccagcctgggtcccgatattcactcaaccagaatgaa
tgtaaacgcagtctgaccatccacaatctaaatctctcagaccgcggaacctaccgttgt
gagactctgcatgacaggacgcaggtcaaactaaacgtagagccccgtaaaatctccatc
cgtaaagggctcgcagaccaggaaaccttagaacgtgagacggcatcctttgaggtggag
ttgtctcaccctgacgtgcagggcaattggcagaaggatggtattcgggtgaagccaaac
aaccagttaagggtgagtaccaatgggcgagtccacggactcaccctttccaatctcacc
ctggaggacacatgtaccattgccttctcagcagaaggggtgcgcacgactgcaaggctc
acagtcaaagagactccagttaccatcataaaagctctggtcgatgtacgtgtagaagaa
gaatttcctgccactctggagtgcgaattatctcgacaaaacactgaagtcagatggttc
aagagcgggactgagttgaaaccaggcaggaactgtcggatctattccatggggcgaaac
aaattctgtcagatcctgcagtgctctctggcggattctggcatctacacttgtgatgtg
ggggaaagaacctcttcctgctcattagacgtttatgaacacgagctgaagattctgcaa
gatctggaggaccttcacattcaggaagaccagaatgcagtcttcatgtgtgaggtttct
ctgaaggatgcgattggagaatggtataaggatggctacaagatccggcccaccagcacc
atcaaaacccgcacagaagggaccaaacacttcctgctgatgtgcaatgtcaaagctgag
gatgctggagaaatacgctttgtaagcagagacactgaatctactgcttatctcgaagtc
gaagaacccccagtatccattgtcaaaccattgcgggacaggacagcattggagaaacac
cgtgttatcctagagtgtacggtttcctcggctcgctgtactgctacctggtaccgcggc
aaagagcgacttgtcccttccgatcgagttgatcttgtagtcgatggttgctcccataaa
cttgtgatccaggaggtggagctggaggatgagggcatctatagtattgaggttgggctg
cattcctccaaggccaaactcatggtggaagcccaagagcttgtggtggtgcaggagcta
gaggacgtggaggtagacgagaatgaaccagcagttttccaatgcgaagtctctgtagct
atcagcagaaccccggtttggacgctgaacggcgagaacattaagcctggcccctcgatc
cgcctggaaaaccatggcactgtgcacaaactcacgctgaaacacaccaaggtggactta
agcggtgtggttaagttcagtgtaggcaaagcaaagaccagcgccattctcaatgtgaga
gaatgcaaatga
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