Syngnathoides biaculeatus (alligator pipefish): 133506480
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Entry
133506480 CDS
T09681
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sbia00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
sbia01100
Metabolic pathways
Module
sbia_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
133506480 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
133506480 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sbia01003
]
133506480 (xylt1)
Enzymes [BR:
sbia01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
133506480 (xylt1)
Glycosyltransferases [BR:
sbia01003
]
O-Glycan biosynthesis
Glycosaminoglycan
133506480 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Methyltransf_33
ODV-E18
Motif
Other DBs
NCBI-GeneID:
133506480
NCBI-ProteinID:
XP_061686653
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All DBs
Position
9:complement(3179518..3275676)
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AA seq
942 aa
AA seq
DB search
MVGGVCARRLARRSRSALIVALTVLLVQTLIVWNFSSLDSGEDSRGDRASNVRGKRDRVA
GNKAAGSDYFQHGAQRQRRQHLPPTGRGTSRHIQQPDGYYSHRPKEKSRVDSNNENSVPK
DFDNIDNSNFGARSQPHRQTAGATSRRQQREHLQDKAHGQQHIWRDNSPNLVRSSNEVLP
LSHRPLAVANNSRPGGQGVGAGGPRHRASQPQHRHQHPHKKQATVASLEVTYDQPPKCEI
SGKEAISALSRAKSKDCRQQIAEVYCRHKEGQLMPEKVTRSCPLEGKANTIIQWDEDSAE
NFPSNPVRIAFVLVVHGRASRQFQRLLKTIYHTSHYYYIHVDQRSNYLHRQVKALAAQYP
NVRVTPWRMATIWGGASLLTMYLRSMADLLSMRDWSWDFFINLSAADYPIRTNNQLVGFL
SKYRDMNFIKSHGRDNARFIRKQGLDRLFYECDTHMWRLGDRKIPEGISVDGGSDWFLLN
RMFVEYVINSKDNLVTNMKRFYAYTLLPAESFFHTVLENSAYCESMVDNNLRITNWNRKL
GCKCQYKHIVDWCGCSPNDFKPVDFHRFQQTVRPTFFARKFEASVNQEIVNHLDAYLFGP
FPPGTPGLNSYWENLYDEPDGVASLSDTQLTYYHSFSRLGLARAAASLQGNPVDHSCRYF
PMGHPVSVHFYFQSDQFQGYLVRHHATNLATSKLETMETWVAPKKIFKFTTPPKSTFGRL
QFAEIGTEWDAKERIFRNFGGLMGPMDETVGMQKWAKGPNVTVTVVWIDPTNVIAATYDI
LIDATAEFTHYRPPLNQPLRPGLWSVRILHHWSPVAEMHFLITPLAYNKHQPIRQEDTLK
LHNGPSKNSYMEQSFHGLNPVLNIPVSLASVEQAKRNAALTGPELERWVDSLVGELWEAA
DICAVGQTACPVMQACPKNPWSSLSPDPKSQLRPLHADGHIR
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcggcgtgtgtgctcgcaggctggcccgccggtctcggtccgccctcatcgta
gccctcacggtgttgctggtgcagacgctgatcgtgtggaacttcagcagcctcgactcc
ggtgaagacagtcgcggagacagagcctccaacgtgcgggggaagagggaccgggtagcg
ggcaacaaagccgctggcagcgactatttccagcatggagcgcagcggcagcggcggcag
catcttccgccgactggaagaggaacatctcgtcacatacagcagccggatggatactac
tcccaccggccaaaggagaaaagcagagtggacagcaacaatgagaactctgtaccaaaa
gattttgacaacatagataatagtaactttggtgcacgctcccagccgcatcggcagacc
gccggggctaccagcaggaggcagcagcgagagcatctgcaggacaaggctcatggccag
cagcacatctggcgtgacaactctcccaacctggttcgcagctccaatgaagtgctacct
ttaagccaccggccactggcagtcgccaacaactcacgccctggtggtcaaggtgtgggc
gcaggagggccgcggcatcgtgcctcgcagccccaacacaggcatcagcacccacacaaa
aagcaggccactgtagcgtccctggaggtgacctatgatcaaccgcccaagtgtgaaatc
agtgggaaggaagccatctcagctctgtccagggccaagagcaaggactgcaggcagcag
atcgcggaagtgtactgcagacacaaggagggccagttaatgcctgaaaaggtcactcgc
tcctgccccttagagggcaaagccaatacaatcattcagtgggatgaggactctgcagag
aacttcccatcaaatccagtgcgaatagcgtttgtcttggtggtgcatggacgagcctct
cgccagtttcagcgtctcctcaaaaccatctaccacacgtcccactactactacatacac
gtggatcagcgctccaactacctccatcggcaggtaaaagccttggctgctcaatatccc
aacgtgagggtgaccccatggcgcatggccaccatctgggggggtgcgagtctcctcacc
atgtatcttcgaagtatggctgacctgttgtctatgagggactggagctgggatttcttc
atcaacctcagtgcggctgactaccctatcaggacaaacaaccagctggtgggctttttg
tccaaataccgagacatgaacttcatcaagtcccatggcagggacaatgccaggtttatc
cgtaaacaaggtctggatcgtctcttctacgagtgtgacacccacatgtggaggctgggt
gaccgtaaaatcccagagggcatctccgtggacggaggctccgactggttccttctgaac
cgcatgtttgtggaatatgtcatcaactctaaggacaatctggtcaccaacatgaagcgc
ttctacgcctacactctgctccctgccgagtcattcttccacactgtgttggagaacagt
gcctactgtgagagcatggtggataacaacctgcgcatcaccaactggaatcgtaaattg
ggctgtaaatgccagtacaagcacatcgttgactggtgcggatgttcccctaatgacttc
aagcctgtagacttccaccgctttcagcaaacggtgcgtcccaccttctttgccaggaag
tttgaagccagcgtgaaccaggagatagtcaaccatctggacgcctacctgtttggaccc
tttccaccggggacgccaggcctcaactcgtactgggagaatctgtacgacgagccagat
ggtgtggccagtctgtcggacacacagctcacctactatcattccttctcaagattgggc
ttggcccgcgctgctgcctcgctgcaaggcaacccagtggatcacagctgcaggtacttc
cccatgggccacccagtgtccgtgcatttctattttcagtcggaccagttccagggctac
cttgtcaggcaccacgccaccaatttggcaacaagcaagctagagacaatggagacctgg
gtggcaccgaagaagatcttcaagttcaccactcctccaaaaagcacattcggcaggttg
cagtttgcggagattggtacagagtgggatgccaaagaacgaattttccgaaattttggc
ggcctgatgggccccatggatgagacggtgggaatgcagaagtgggcaaaggggcctaac
gtaacagtaacagtcgtgtggatcgacccaaccaacgtcatcgcggccacctacgacatt
cttatcgatgccactgcagagttcacccactatcgaccaccactcaaccagcctctgcgt
cctggactttggagtgtccgcatcctgcaccactggagtcctgtggctgaaatgcacttc
cttatcacccctttggcctataataagcaccaacctatacgtcaagaggacacgctgaag
ctgcacaatgggccatccaagaacagctacatggagcagagtttccacggcctcaaccca
gtgctcaatatccccgtcagcctggcgtccgtggagcaagccaagagaaatgccgccctg
accggcccagagctggagcgctgggttgacagcctggtgggtgagctgtgggaggcggca
gatatctgcgcagtgggccagaccgcctgccccgtcatgcaggcttgccccaagaaccct
tggagctccctaagccccgaccccaaatcccaactgagaccgctgcatgctgatgggcac
atcaggtag
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