Syngnathoides biaculeatus (alligator pipefish): 133506505
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Entry
133506505 CDS
T09681
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
133506505 (shoc2)
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Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_13
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
133506505
NCBI-ProteinID:
XP_061686705
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Position
9:complement(243980..279139)
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AA seq
582 aa
AA seq
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MSSTLGKEKDSKEKDPKSGSGGKEREKEAKALAGLAKDGGKETKTKGKETKDGKKDTSSS
TPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPTSIK
ELTQLSELYLYSNKLQSLPPEVGCLSGLLTLALSENSLTSLPDSLDSLKKLHMLDLRHNK
LREIPPVVYRLTSLATLYLRFNRITTVEKDIRNLSKLKMLSIRENKIKQLPAEIGELRIL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
RSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFFRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVVGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaagattcaaaagaaaaggaccctaaaagtggatcg
ggaggcaaagaaagggaaaaggaagccaaggctcttgcaggcctagcaaaggatgggggc
aaagaaactaagaccaaagggaaagaaaccaaagatggaaagaaggacaccagcagctca
acaccgggtgttgctttctccgttgacaatacgataaagcggccaaacccagcaccagga
acacgcaagaagtccagcaatgccgaggtgattaaggagcttaacaagtgccgggaggaa
aattccatgagattggatctctcaaaacggtctattcacatgctgcccacctccatcaag
gagctgacacagctgtctgaactctacctatacagcaacaagttgcagagcctaccacct
gaggtgggttgcctctcaggcctgctcacattggccttgagcgaaaactccttaaccagc
ttgcccgactcactggactccctaaagaagcttcacatgcttgatctccggcacaacaag
ctgagggagatcccgccagtagtctaccgattgacatcgctggccacgctctacctacgc
ttcaaccgcatcaccacagtagaaaaagacatccgtaacctatccaagctcaaaatgctc
agcatccgagagaacaagataaagcagcttcctgcagagataggggaacttcgaatcctt
attactctggatgttgcccataatcagttggagcacttaccgaaggagattgggaattgc
acacaaataaccaacctagacttgcagcacaatgagcttttagacctcccagagactata
ggaaatcttgccagcataaaccgcttgggtctgagatacaatagattatcagccattccc
agatcattagccaaatgtcgagaactggaagagttaaatcttgaaaacaataacatttca
gtgttaccagagggtctcctgtcaagtttggtcaacctcaccagcctgacactcgcaaga
aactgcttccagtcataccctgtgggtggaccatcccaattttcaaccatctattcgctc
aatatggagcacaaccgcataaacaagatcccctttggaatcttcttcagggccaaagtt
ttaagcaagcttaacatgaaggacaaccaattaacttctctgccgttggactttggcaca
tggaccagcatggtggagcttaatcttgccaccaatcaactgacaaaaatcccagaagat
gtctgcggtctggtgtctctcgaggtgttaattttgtccaataatcttctgaaaaagtta
ccgcatggtatcggcaatttgagaaagcttcgggagcttgacttggaggaaaacaagttg
gaatgtctccccaatgaaatagcgtatctcaaggatttacagaaattggtgttgacaaat
aaccagctgacaacattacccagaggcattggccacctcaccaacttgactcatctgggt
ttgggggagaacctgctgcaacatcttcccgaggagattggcacactggagaacctggag
gaattgtacctcaatgacaaccccaatctacacagcctgccctttgagctggccctgtgc
agcaagttgtccatcatgagcattgaaaactgtcctctcagccacctaccgccccagatt
gtggttggggggccctccttcatcatccagttcctcaagatgcagggaccttaccgtgcc
atggtctga
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