KEGG   Syngnathoides biaculeatus (alligator pipefish): 133506674
Entry
133506674         CDS       T09681                                 
Symbol
polq
Name
(RefSeq) DNA polymerase theta isoform X1
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbia03400]
    133506674 (polq)
Enzymes [BR:sbia01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     133506674 (polq)
DNA repair and recombination proteins [BR:sbia03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    133506674 (polq)
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII AAA_30
Other DBs
NCBI-GeneID: 133506674
NCBI-ProteinID: XP_061687015
LinkDB
Position
9:complement(20875124..20891992)
AA seq 2532 aa
MMNAAGPASRRKSYMGQHKIKKKKCEKLPIRATRDLSSRKDAGATVAAPGGGGPEEDAER
AQKETPGARENAFRPNAGKPRRGAGREGLAQRLLFSEDSEESQQQPAGGRQNSNDAASAS
EEEEEAKAAAFRKTFPRDKEKNGGGNAKAKAGAGRAVSGDYILFSPKRADAERRSSSALT
LPSGFDLCGSLPQPGPALCAPDDARSDKLSLSSWGLPAAVLARYRKVGVSRMFDWQAECL
GLGRVLRGANLVYSAPTSAGKTLVSELLMLKRVLETKRKALLILPFVSVAKEKMRYLQSV
FEEAGVRVDGFMGSTSAAGGFSAVDVAVCTIEKANSLVNRLIEEGDLASLGMVVVDELHM
VGDSGRGYLLELLLTKIRYVAQKRNTTGSVSEGVQIVGMSATLPNLSLLARWLGAELYQT
DYRPVPLQEHLKVGGNFYDKSLSVVRRFTPALPIKGDDEHVVSLCYETVREGHSVLLFCP
SKNWCEKLADGIAREFYNLRRPEREGKSEPQAVRLDQEGLVDVLAQLSRTPAGLDPILGR
TVPWGVAFHHAGLTFEERDVLEAAFRQGTVRVLSATSTLSSGVNLPARRVIIRTPIFNGR
LLDPLTYKQMAGRAGRKGVDTTGESVLLCKEAERQKGMSLLAGELQPIGSCLARREGEGV
TTSMLRAILEIIVGGVASTPQDVRLYASCSLLAAGDEWNGKEEPREEGAIEACVKWLMDN
EFISVQKDGHEEQYCPTQLGAATLSSSLSPPEALGIFADLQRAMKGFVLESDLHILYLIT
PLCAEWTAVDWYQFFCLWEQLSSSMKRVAELVGVQEGFLARSVGGKLVAKTEKQRRQMAI
HKRFFTTLVLQDLVMEVPLGAVASKYKCNRGQLQSLQQSAATYAGMVTVFCRRLGWANME
LLLSQYQTRLSFGVQRELVDLVRVSLLTATRARAFYAQGLRTVAELAGASVADVEKALRN
AAPFKSCKRAVDESEAEAVERRKLRCVWVSGGRPLTEQEAAVAIVSEAKLLLRGDLAQLG
VRWDPAEGDAVQKNKAHGDTISQVDTGEPAGGDGRCKAKTINDETKWKELRTSQKAGGRE
VPLHGGKEGNNQRRNQSKAGKGQSEDKLGKGEPRSQEVNVVVQEGVTRQVSFTKEAHRSN
GPVKSVTQELDEIVSSPALQLQRPSEPDLLMTLLPRLRAPSSRLEEHPSLCAKTSDLDDA
SKFGIAPLQTGTLKHSKILNKVLQSIQSDKRPQDSSLLTSHTSNAAEVAHGLAQETRTAP
PLAEQVKMRHSSGSASSVRFSPEVKRRRLEAPEVDGFSSPDLYTGEDRNEDVQPEAKRGE
ETFGDSFELDTQTERIIAQPRFEPGGGTDLTDGAHVQDEVIVQPSAGKGHQDGGSAGIDV
PDNKSPVFSISLTDSQMELILNSGHQNSAADGDRKAAEAAVVEDPDRSSSFLFDSLYENS
ENSLSADRTDLSGSAYEEREARGARPILSPQEKRRSELLVNQEAENREAIQWGESSFNLS
EWGYSLLGGEHFLERWEAGHPQGHVLPEGQTTSARAEPQSPLPRETRGMPSEERNKKEQE
GELIYVATDAAPQSGFYCSPGLQEIFDCWPSMSDQPVEKATLGHVENNKQIPPSNPPQTP
KQSPPFIDEKPVDTDPETESVQPQPPGEPGGSGTQKPDSAADLVPPTQDTTPTTHRIKLS
MTSVHSPLSQSTPSGVLPARPPKCPTTNLPSGFCKTKNVTGESRHHANVTSACRRQPPAD
RDRSASPGRTPPQPPNDSVSLDSYEGFSLQLSQDATLSSSNSSEFSIIDVSSDKRLFQTF
VKEWKTKERYSLALACETVGHPREPEEEIGGERKRAQQKVREADGFPVRGGDGLLLIGLA
VCWGARDAFYVSLQRKQDKGLSLSLAPPDPDEGLPVGERLEHVKACLSGPSAGTVVTHDL
IQVYKKLLLSCGISLEGNCEDPKVACWLLDPGADERTLANMISVYCPEDLPLLDGLGSAH
AHCPRVRAATESVLVHAVMDPLTTLLDKDGMLDSFRSVEMPSQVCLALLELNGVGFSLDE
SERQKHVMQAKLAALESQAYELAGHSFSLTCIDDIAQVLFLELHLPPNGDVGAPKSKKTL
GYTRRGGSRVRLGKQFSTTKDVLEKLRPLHPLPAVILEWRRVTNALTKVVFPLQREKKYH
ATLAMDRIYPVAQTHTATGTRVAFAPPPREARGVLLFLSVGRVSFTEPNIQNVPKDFDIR
MAAEVGESPPSQDGHHKSKHGKKRRSLAPSVPGREAANLGPSFCVSMRHAFVPFSGGMIL
AADYSQLELRVLAHLSEDQRLLKVLNGGADVFRCIAAEWKSVDPDGVDDGLRQQAKQICY
GIIYGMGAKSLGEQMGVEENDAARYIETFKARYKGINCFLRETVKKCIKDGYVQTLMGRR
RYLAGIADSNPHVKAHAERQAVNTTVQGSAADIVKRATVNIHRRLRKMYPKAPLSHQHVR
AAAHRRRDAHLRGAYFVLQLHDELFYETAEENLIQVAQIVKREMESAVQLHVRLKAKVKA
GSSWGNLQDLDI
NT seq 7599 nt   +upstreamnt  +downstreamnt
atgatgaacgctgccggccccgcttcgaggaggaaaagctacatgggccagcacaagatc
aagaagaaaaagtgtgagaagttgccaattcgggcaacccgcgatctgtcgtcacgcaaa
gacgccggcgcaacggttgccgcgcccggaggggggggccccgaggaagacgccgagcgg
gcgcagaaggagacgcccggcgcccgcgagaatgcctttcgcccaaatgccgggaagcca
cgtcggggcgccggccgcgaaggccttgctcagcggctcctcttcagcgaggattcggag
gaaagtcagcagcagcctgctggcgggcgtcagaacagcaacgacgcagcttcagcttca
gaagaagaagaagaagcaaaagcggccgctttcaggaagacgtttccccgtgacaaggag
aaaaacggaggggggaacgcgaaggcgaaggcgggtgctggtcgtgcagtttccggggac
tacattttgttcagtcccaagcgcgcggatgccgaacgccggtcgtcctccgcgctgacg
cttcccagcggcttcgatctctgtggcagtttacctcagccgggcccggctttgtgcgcc
cctgacgacgcgcgatccgacaagctgtccttatccagttggggtttacccgccgcagtc
ctggcgcgttaccgcaaagtcggagtcagccgcatgtttgactggcaggccgagtgcctc
ggcctcggtcgggtcctgcggggggcgaacctggtctactctgctccgactagcgccgga
aagactctggtgtcggagctgctgatgctgaagcgcgtgttggagacgaaaagaaaagct
ctcctgattttgccgtttgtttccgtggccaaagagaagatgcgctaccttcagagcgtt
tttgaagaggccggagtgcgcgtggacggcttcatgggaagcacgtcggccgccggcggt
tttagcgctgtggatgtggccgtttgcaccatcgagaaagccaactccctggttaacaga
ctgatagaggaaggcgacctggcgtcactcggtatggtcgtggtggacgagttgcacatg
gtgggagattccggaagaggttatctgcttgaacttctcttgaccaaaatccgctacgtc
gcacagaagcgcaacaccactgggtctgtttctgagggtgtgcagatcgtgggcatgagt
gccactttgccaaacttgtccctcctggcccgctggctcggcgcagagctgtaccagacc
gactacagaccggtgcccttgcaggagcacctgaaggtgggcggcaacttctacgacaag
agcctctctgtggttcgacgctttaccccagcgcttccgataaagggcgacgacgagcac
gtcgtcagtttgtgttatgagacggtgcgggaaggccattccgtcctgctgttctgcccc
tccaagaactggtgcgagaagctggccgacggtatcgccagagagttctacaacctcagg
cgtcccgaacgtgagggcaaatcagaaccccaagcggtgcgcttggatcaggagggacta
gtggacgtcctggcccagttgagtcggactccagcgggtttggatcccatcctggggcgc
accgtgccttggggggtggccttccaccatgccggtctgacatttgaggaacgcgacgtc
ctggaggcggccttccgtcagggcaccgtcagggtcttgtccgccacctccaccctctcg
tcgggggtcaacctccccgcccgcagggtcatcatccgaaccccgatcttcaacggacgc
ctgctggacccgctcacgtacaagcagatggctggacgggcgggccggaaaggagtggac
accacgggtgagagtgtgctactgtgcaaggaggcggagcgtcaaaagggtatgagcctc
ctcgcaggtgagctccagccaatcggaagctgcttggcgagaagggaaggcgaaggcgtc
accaccagcatgctgcgagccattctggagatcatcgtgggcggggtggccagcactcca
caggacgtgcggttgtacgcttcctgttcgcttctggccgccggcgacgaatggaacggc
aaagaggagccgagggaagagggcgcaatcgaggcctgcgtcaaatggctgatggacaac
gaatttatcagcgtccaaaaagacggacatgaggagcagtactgtcccactcaacttggt
gcggccactctgtcgtcctccctgtccccccccgaggccctgggaatatttgcggatctg
cagcgggctatgaagggctttgtcctggaaagcgacctgcacattctctatctgatcacg
ccgctctgcgccgagtggaccgccgtcgactggtatcagttcttctgcctgtgggagcag
ctgtcgtcatccatgaagagagtggcggagttggtgggggtccaggagggtttcctggct
cgctcagtcggggggaaactcgtcgccaagacggagaagcagcgccgacaaatggcgatt
cacaaaaggttcttcaccacgctggtactgcaggatctggtgatggaggttcccttggga
gcggtggcgtccaaatacaaatgcaaccgtggccagttgcagtctctccaacagtcggcg
gccacgtatgcaggtatggtgacagtgttctgcaggcgtctgggctgggccaacatggag
ctgctgctgtcgcagtaccagacccggctgagcttcggcgtccaacgtgagctggtggac
ctggtcagggtttcccttctgaccgcgaccagggcccgggctttctacgcgcaaggcctg
cgcaccgtcgcagaactggccggggcttccgtcgccgacgtggagaaagcgctgaggaac
gccgccccgtttaagagctgcaagcgtgcggtggacgagagcgaagcggaagccgtggaa
cggcggaaactccgctgcgtgtgggtgagcggcgggcgacctctgaccgagcaggaagcc
gccgtcgccatcgtgtcggaggcaaagctccttcttcggggagacctggcgcagctgggc
gttcggtgggacccggcagagggagatgccgtccagaagaacaaggcgcatggtgatacg
atttcacaggtggatacaggagaacccgcaggaggtgatgggagatgcaaagccaagacg
atcaatgacgagacaaaatggaaggagttgaggacaagccaaaaggcgggaggccgtgaa
gttcccctgcatggcgggaaagaaggaaacaatcaacggaggaaccagtccaaagctggc
aaaggacaaagtgaagataagctgggaaagggagagcccagaagccaggaggtaaacgtt
gtcgtgcaggaaggagtcacaaggcaagtttcattcacaaaggaagcacaccggtctaat
ggtccggtaaaaagcgtgacacaagaattggacgaaattgtgtccagcccggcgcttcaa
ctccaacgaccttcggaaccagatctcctcatgactttgcttcctcggctgagagcccca
agttccaggctagaagagcacccgagtctttgcgccaagacgtcagaccttgatgatgct
tccaagtttggcattgcgcctcttcagactggaacactcaagcattcaaagatcctaaac
aaagtccttcagtccatacaaagtgacaaacggccacaggactcctccttgctgacttcc
cacacctccaacgccgccgaggtcgctcacggcctcgctcaagaaactcgaaccgcacct
cctctggcagaacaagtcaaaatgcgccactcttctggttccgcctcaagcgtgcgattc
tcgcctgaggtcaagcggagaaggctggaggctccggaggtggacggattttcatctcca
gacctctacactggagaggaccgaaatgaagacgtgcagcccgaggccaagcggggagag
gagacgtttggtgacagttttgaattggacacgcagactgaacggataattgcccagcca
agatttgaacctggcggcggaactgatttgacggatggagctcatgtacaagatgaagta
atcgtacaacctagtgcggggaagggtcaccaagacggaggaagtgcgggaattgacgtt
ccggacaacaaatcccccgtgttcagtatttctctgacagacagccagatggagctcatc
cttaacagcggtcatcagaattctgctgcggacggtgaccgtaaagcggccgaagctgct
gttgtggaagatccggacagaagcagcagcttcttgttcgacagcctgtatgagaactct
gagaactctctgagcgcagaccgaacagacctgagcggatcagcctacgaagagcgagag
gcaagaggcgcccgccccatcctgtctccccaggagaaacggcgcagtgagctcctcgtc
aaccaggaggcggagaatcgagaagcgatccagtggggagagtcttcgttcaacctgtcg
gagtggggctattctttgctgggaggcgagcatttcctggagaggtgggaggccggtcac
ccgcaaggtcacgttcttccggaggggcagacaacctcagcacgagccgagccgcaatct
ccgcttcccagagagacccgaggaatgccgagtgaggaacggaacaagaaggaacaggaa
ggcgaactcatctacgtagcaacggatgctgcacctcagagcggcttctattgcagtcct
ggtctgcaggagatcttcgattgctggcctagcatgtctgatcaaccggtggaaaaggct
acattgggccacgtggagaataataagcaaattcctccttcaaaccctccacagacgcca
aaacagtctcctccattcatagatgagaaacctgttgatactgaccccgaaacagagtct
gttcagccacaaccaccaggagagccaggaggcagcggaacgcagaagccggactctgcc
gcagacttggtaccccccactcaggacacgacacctacgacacacagaatcaaacttagc
atgacatccgtccactcgccgctcagtcagtcgaccccctcgggcgtcttgcctgcgaga
cctccaaaatgccccacgactaatcttccaagcggtttttgtaaaactaaaaatgtgacg
ggtgaatcaaggcaccacgccaacgtgacgtccgcttgccgacggcagcctcctgcagac
cgggaccggagcgcttctcccggccgcaccccgccgcagcctcccaacgacagcgtgtcc
ctcgactcgtacgagggcttctctcttcagctctcccaggatgctacgctctcctccagc
aactccagcgagttctccatcatcgacgtttcaagcgacaagcgcctcttccagacgttc
gtcaaggagtggaaaaccaaagagcgctactctctggctttggcctgtgaaacagtggga
cacccgcgggagcctgaggaggaaataggaggggaacggaagcgagcgcagcagaaggtc
cgagaggcagacggttttcccgtaagaggaggcgacggactgctgctgatcggtctggct
gtctgctggggagcaagagatgctttctacgtttccttgcagcggaagcaggacaaaggt
ttgagtttaagtcttgcccccccggacccggacgagggtttgccagtgggcgagaggctg
gagcacgtgaaggcctgtctcagcgggccgtcggctggcacagttgtcacccatgacctc
atccaggtgtacaagaaactgctcttaagctgcggcatcagcttggagggaaactgcgaa
gaccccaaggtggcgtgctggctgctggaccctggcgccgacgagaggactctggccaac
atgatcagcgtctactgtccggaagatctgccactgctggacggcctcgggagcgcacac
gcccactgtcctcgcgtgagggcggcgacggaaagcgtgctcgtacacgccgtcatggac
cctctcacgactctactagacaaggacggcatgctcgactccttcagaagcgtggagatg
ccctcgcaagtgtgtttggctctgctggaactcaacggcgtgggcttcagtctagatgag
agcgagcgacagaagcacgtgatgcaagccaagctggcagcgctggaatctcaagcgtac
gagctggcggggcacagcttctccctgacctgcatcgacgacatagcgcaggttttgttc
ttggagctccatctgcctccaaacggtgacgtgggagcaccaaaaagcaagaagaccctc
gggtacacccgcagagggggaagcagagttcggctcgggaagcagttcagcacaactaag
gacgttctggagaagctccgtcctctgcatccgctgccggccgtgatattggagtggagg
agggtcaccaacgctttgaccaaagtggtgttcccgctgcagagggaaaagaaataccac
gcgacgttggccatggatagaatctatcctgtagctcagacgcacacagccacaggtacg
cgcgtcgcattcgcgccaccgcctcgagaggctcgtggagttcttttgtttttgtccgta
gggcgagtgagcttcaccgagcccaacattcagaacgtgcccaaagactttgacatccgc
atggccgcagaggtgggagagagcccgccttcgcaagatggccaccacaagagcaaacac
ggaaagaagaggcgctctttggccccatcggttcccgggagagaagctgcgaatctggga
ccgtctttctgcgtcagcatgagacacgcctttgtacccttctcaggcgggatgatcttg
gcggccgattactcccaactggagttgagggtgctggctcacctgtccgaagatcaacgt
ctgctgaaggtgctgaacgggggcgccgacgtgttccgctgcatcgccgccgagtggaaa
agcgtcgacccggacggggtcgacgacggcctccgacagcaggccaagcagatttgctac
ggcatcatttacgggatgggggccaagtctttaggggaacaaatgggcgtggaggagaac
gatgcggcccgctacatcgagactttcaaggccagatacaaagggatcaactgtttcctc
cgagaaacggtgaagaagtgcatcaaggacggttacgttcagactctgatgggacgtcgc
cgatatctcgctggaatcgccgactccaacccgcacgtcaaggcgcacgcggagcgtcag
gccgtcaacacaaccgtccagggctctgcggcagacatcgtcaaacgcgccaccgtcaac
atccaccggcgactgcgaaaaatgtacccgaaagcgccgctgtctcaccagcacgtgcgt
gcagccgctcaccgtcgcagggacgcacacttgagaggagcctactttgtcctgcagctc
cacgacgaactcttctacgaaactgctgaggagaacctcatacaggtggctcagatcgtc
aagagggagatggagtcagcggtccaacttcacgtcaggctaaaagccaaagtcaaagcg
ggatccagctggggcaatttacaggacttggatatttaa

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