Syngnathoides biaculeatus (alligator pipefish): 133506696
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Entry
133506696 CDS
T09681
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03013
Nucleocytoplasmic transport
sbia03015
mRNA surveillance pathway
sbia03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133506696 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
133506696 (eif4a3)
03015 mRNA surveillance pathway
133506696 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133506696 (eif4a3)
03041 Spliceosome [BR:
sbia03041
]
133506696 (eif4a3)
03009 Ribosome biogenesis [BR:
sbia03009
]
133506696 (eif4a3)
03012 Translation factors [BR:
sbia03012
]
133506696 (eif4a3)
Enzymes [BR:
sbia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133506696 (eif4a3)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133506696 (eif4a3)
mRNA cycle factors
Stress granule specific factors
133506696 (eif4a3)
Spliceosome [BR:
sbia03041
]
Complex C
Other components
EJC/TREX
133506696 (eif4a3)
Ribosome biogenesis [BR:
sbia03009
]
Eukaryotic type
90S particles
Helicases
133506696 (eif4a3)
Translation factors [BR:
sbia03012
]
Eukaryotic type
Initiation factors
eIF-4
133506696 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
NOD2_WH
Motif
Other DBs
NCBI-GeneID:
133506696
NCBI-ProteinID:
XP_061687070
LinkDB
All DBs
Position
9:21618719..21623244
Genome browser
AA seq
406 aa
AA seq
DB search
MAATGVQSRKRLLKDEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDFGQHVVSGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccgccactggcgtgcagagtcgaaagaggctcttgaaggacgaggacatgaccaag
gtggagtttgagaccagcgaggaggtggacgtcacccccacctttgacaccatgggcctg
cgggaagacctgctgcgcggcatctacgcttacggcttcgagaagccgtcggccattcag
cagcgagccatcaagcagatcatcaaaggcagagacgtcatcgcccagtcccagtccgga
acggggaagacggccaccttctgcgtgtcggtgctgcagtgtctggacatccaggtgcgg
gagacgcaggcgttgatcctggcacccaccagagaactggctggacagatccagaaggtg
ctgctggcgctgggagactacatgaacgttcagtgccacgcgtgtatcggggggaccaac
gtgggggaggacattcgcaagttggacttcggccagcacgtggtatcgggaacgccgggg
cgagtcttcgacatgatccggcgcaggagtctccgcacgcgcgccatcaagatgttggtt
ctggacgaggccgacgagatgctcaacaaaggtttcaaggagcagatctacgacgtgtac
cgctacctgccccccgccacgcaagtggtcctcatcagcgccacgctgccccacgagatc
ctggagatgaccaacaagttcatgacggaccccatccgcatcctggtcaagcgtgacgag
ttgaccttggagggcatcaagcagtttttcgtggccgtggagcgcgaggagtggaagttc
gacaccctgtgcgacctttacgacacgctcaccatcacgcaggccgtcatcttctgcaac
accaagaggaaggtggactggctgacggagaagatgcgagaggccaacttcaccgtgtcg
tccatgcacggggacatgccgcagaaggagcgcgagtccatcatgaaggagttccgctcg
ggggccagccgcgtgctgatttcgacggacgtgtgggcacgcggtctggacgtccctcaa
gtttcgctgatcatcaactacgacctgcccaacaatcgagagctgtacatccacaggatc
ggccgctccggccgctacggccgcaaaggcgtggccatcaacttcgtgaagaacgacgac
atcaggatcctgcgcgacatcgagcagtactactccacgcagatcgacgagatgcccatg
aacgtggccgatctgatctga
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