Syngnathoides biaculeatus (alligator pipefish): 133506720
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Entry
133506720 CDS
T09681
Symbol
si:dkey-92j12.5
Name
(RefSeq) multiple PDZ domain protein isoform X1
KO
K06095
multiple PDZ domain protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133506720 (si:dkey-92j12.5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
DUF6288
L27_1
Motif
Other DBs
NCBI-GeneID:
133506720
NCBI-ProteinID:
XP_061687114
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All DBs
Position
9:complement(20123307..20176261)
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AA seq
1804 aa
AA seq
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MDIMDTQRALEAVERLQAKLKERGEAPAQEKLSLLKTVLRSPLFLHILSLQKAQRKPPAK
GKGLTKSVSMNCGKWQGVAMDAKTLSHSDSYTWAMENQRPSRSLHRDGSVSSLDSLDLSF
SDTYQDNCIHTESQYCTPPRISRTMSMGKNLSAIAHERRHLEIIELANDGKGLGFGIIGG
RSTGVIVKTVLPGGAAGQDRRLRSGDQILRIGDTDLAGMNSEQVAQVLRNAGSKVKLLIA
RDINKDNLSSPVLSQESLDGALYDLNDDYEFSVQFTKNSRGLGFTISSYIGNLNSIYSVG
VTVKSILKGSSVDQDGDIHIGDIILSVDGVSLQGCSEQRAMEVLRRTGPVVRLRLLRKAV
RLSHILPPVPPLQPLRHSHSFREGNPYRVEANKVHDTGIRSLREISRRAAYAGRRPRRDS
RSGVELTPAEEEDLRMRWQRALGPRYQVIVCQLERFSETSGLGISLEARAGHHYLCSVLP
EGPIGQSGKIFTGDQILEVNGIPLIGETHKEVVNVLKELPVCVYLACSRVVPPAVPDSDD
DDEEDDGRLTLKELLAEFNDKLDQGCVIPCPTAEDITKRGVPPMSPPLAMWEREAQVVEL
EKGESGLGFSILDYQDPEDATKTVLVIRSLVPGGVADRDGRLLPGDRLMFVNETDLEGSS
LDYAVHVLKSTGYGPVHIGVAKPLPLELCGGLTPILERSTRASCDDGEGHPHAHPLAEAA
EDDAGDLADDNDVRPYYDNSESRFGLMEDDGAQAAPPLPPRTSFEKTITVVRGNRSLGMS
VSAIRDGSGMLVRSVAPGGSVGQDGRLGAGDAILAINGERTSDLNNATARSMLRRHSVIG
PELSINYVPAHQVDAHRSRLRLPPLASILEDSPPPPADTAPARSSVRCQTPTAAPGQTSE
GAAAVPAVSPAPDRSGRRPKCRPPQIGDEENGVPSKEGGNEEPDEDLHCRPLVSWDPPRS
VRLTRAAGQSLGISIMGGKGMGQRLSGGEMMRGIFIKHISSDSPAAHDGAVQVGDRILEV
CGVDLRDASHEQAVEAIRRAGDCVQILVQSRQRAAQTPALPTHERQTPILPTESHNSQEV
QQHLSGPAPSPPPSDPFAPAPFKVGTWFGAGVVGENQEAEEKRLRVPQQTSDRAARRSPA
DDVDNAATKKMLQRYGSLSGRLHMIELEKHTAEQSLGIRLAGNKEGSRARMNVYVEDVDP
RGPAGLDGRIRAGDELLEINGQILYGRSHQNASAIIDNAPSKVKIVLIRNKTEGKRSHSK
ADSGVCKGISNDAQNFDPSQDGRRDGKAANDEAAARPSAEEAAVNASGGRPEASPSGSSS
SSKPGRAASPIPESSSSAAERRSDRPASARASDPLRCPIEAGRETAVEIVKGNVGLGLSI
VGGCDTLLGSVIIHEVNDGGAAQRDGRLQAGDQIFEVNGIDLRQATHDEAIGVLRLAAQR
VGLRVFRPRAAYREEDLWDVFALVLRPHPVKGVGFTTVGKSNDTGIFVSDIIKGGVTDLD
GRLLPGDQILSINGEDVRGESQDLAARLLQNCSGVFHLEVARFKAGLQYPEPNQEYTKLC
FIQSEDSDCSTLAPSSGSSSSVGQQRETEYRTDTGTAFEDQPDYRKVVLQKGPRDSLGIA
LAGGVGSPHGNVPLFIATMDTSGSAAKTQQLKLGDKILSINGVSVEGMTHVQAGVLLKNA
IGAVTLQEAAGRGPRDVTAVRQSPSGRQSVHSNLCTRMYKTVSLDRDSSGLGFSIVGGFG
SPHGDLPIYIKTIFNKGAAIEDGRLKRGDQIIAVNGQCLEGVTHAEAVDLLKKTKGTVIL
TVLS
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atggacatcatggatacccagcgtgccttggaggccgtggagcgacttcaagccaaactg
aaagagcgaggggaggcccccgctcaggagaaacttagcctgctgaagaccgtcctacgg
agccccctcttccttcatattctcagcttacagaaggctcagcggaagcccccagccaag
gggaagggtcttaccaagtcagtgtcgatgaactgtggcaaatggcagggggtggccatg
gacgccaagacgctcagccacagcgactcctacacgtgggccatggagaaccaaagaccc
agcaggtctctccacagggacgggagtgtttcctctctggactcgctggatctgtccttc
tcagacacctaccaagacaactgcattcacaccgaatcccagtactgcacccctcctcga
atatcccgaaccatgtcaatggggaaaaatctgtcagcaattgctcacgagaggcgtcac
ctggagatcatagaactggccaacgatgggaaagggctcggcttcggcatcataggagga
cggagcacaggagtcatagtcaagactgttctgcctggtggagcagctggacaggatcga
cgtctgcgcagcggggatcaaatcctgcgcattggcgataccgacctggccggcatgaac
agcgagcaggtggcgcaggtgctgcgaaacgccggtagcaaggtgaaactactcatcgcc
cgggatatcaacaaggacaacctttcctctcctgtcctcagtcaggagtccttggatggc
gcgctctatgacttgaatgatgactacgagttcagcgtgcagttcactaaaaacagccgg
gggctgggcttcaccatctccagctacatcggcaacctaaactcaatttacagcgtgggt
gtgacggtgaagagcattttgaaggggagcagcgttgaccaagatggagacattcacatt
ggagatatcatcctgtctgtggacggcgtgagcttgcagggctgcagcgagcagcgcgcg
atggaggtcctgaggaggacgggtcccgtagtccggctgaggctgctgaggaaggccgtc
cgtctgagtcacattttgcccccggtcccgccgctgcagccgctgcgccactcccacagc
ttccgcgagggcaatccctacagagtggaggcgaacaaggttcacgacacaggaatccgc
tcgctgcgtgaaatctcccggcgagcggcgtacgccggcagacgaccccgacgtgattcg
agaagcggagtggaactgacaccggcagaggaggaagacctcaggatgaggtggcaacgt
gcactcggaccaagatatcaagttatagtttgccagctggagcgcttcagcgagaccagc
ggcctgggcatcagtctggaggctcgggccgggcaccattacctgtgctccgttttaccc
gagggcccgatcggccagagcggcaagatcttcactggggaccagatactagaggtgaac
ggcatcccgctcatcggagagacacacaaagaggtggtcaacgtcctcaaggagctgccc
gtgtgcgtttacctggcgtgttctcgcgtcgtgccgcccgccgttcccgacagcgacgac
gacgacgaagaggatgacggccggctcaccctgaaggagctcctggctgagttcaacgac
aagttggatcagggttgcgttattccctgtcctacagccgaggacatcacaaagcgtggc
gtgccccctatgtcgcctcctttggcgatgtgggagagagaagcgcaggtggtggagctg
gagaaaggcgagtcaggactgggcttcagcatcctggactaccaggatccggaagacgcc
acaaaaacggtgctggtcatccgctccttggtaccgggcggggtcgccgaccgggacggc
cgcctgcttccgggagaccgcctcatgtttgtcaatgagaccgacttggagggctccagt
ctggattatgccgtgcacgtgctcaagtccaccggttacggacccgtgcacatcggcgtt
gccaaaccgctgccgctggaactttgcggtggcttgacgcccatcttggagaggagcacg
cgggcgtcctgcgatgacggcgaaggccacccgcacgcccacccgctagccgaagcggcc
gaggacgacgctggcgacctggcggatgataacgacgtccggccgtattacgacaactcc
gaatcccgcttcggcctcatggaagacgacggcgcgcaggctgcccccccgctgcccccg
cgtaccagcttcgagaagacaatcacagttgtccggggcaaccgtagccttgggatgtcg
gtgagtgccatacgggatggctcgggcatgctggtgcgcagcgtggcccccgggggctct
gtaggtcaagacggcagactcggggcgggcgacgcaatcttggccatcaacggcgaacgt
acgtccgacctgaacaacgccacggcccgctcgatgctgcggaggcactccgtcatcggg
ccggagctcagcataaattacgtgccggcgcatcaggtggacgcccaccgtagccgactg
cgtttgcccccgctggcatccatcctagaagactcgcctccgccgcctgcggacacggcg
ccggccagatcttctgtccggtgtcaaactccgactgcggccccgggccaaacgtcagaa
ggcgcggccgcggtccctgccgtgagtccggctccggaccggagtggtcggcgtccaaaa
tgtcgacctccccaaattggagatgaagagaacggcgtgccgtcaaaggagggcggcaat
gaagagccggacgaagaccttcactgtcgccccctggtgtcttgggatccacctcgaagc
gtgcggctcacccgagcggcgggccagtcccttggcatcagcattatgggaggcaaaggc
atgggccagaggctgagcggtggcgagatgatgcggggcatcttcatcaagcacatcagt
tccgatagcccggcagcacacgacggcgccgtccaggtcggggacaggatattagaggtt
tgcggcgtggacctgcgcgatgccagccacgagcaggcggtggaggcgatccgcagggca
ggagactgtgtgcaaattctggtccagtccagacagcgtgcggcacagacccctgcgctt
cccacccatgaaagacaaactccaatcttgccgaccgagtcgcacaatagccaggaagtg
cagcagcatcttagcggtccggcccctagcccccccccttccgacccattcgctcctgct
ccatttaaggtcggtacctggtttggcgcgggcgtcgtcggggagaatcaggaggccgaa
gaaaagcgtctccgcgtgcctcagcagacttccgatcgagcagctcggcgaagccccgct
gacgatgtggacaacgccgccacaaaaaagatgcttcagcgttatggcagcctgtcgggg
aggctccatatgattgagctggagaagcacacggcagagcagagtttgggaatccgcctc
gcgggcaataaggaaggttccagggcccgcatgaatgtctacgtggaggacgtggacccg
cgaggacctgctggcttagatggccgaatacgggcgggcgatgaactactggagatcaac
ggtcagatcttgtatggacgcagtcaccagaacgcctcggccatcatcgacaacgcgcct
tcgaaagtcaagatcgttctcatcaggaacaaaacggaggggaaaaggtcccacagcaag
gccgactctggagtttgcaaaggaatctcgaatgacgcgcagaatttcgacccgtcgcag
gacggccggcgagacggcaaagcggcgaacgacgaggccgcggcccgaccgagtgcggag
gaggccgccgtcaacgcctctggcggccgccctgaggcgagtccgtccggttcgtcctcc
tcgtcaaagcctggtcgcgcggcgtcgcccattccggaatcatcctcctccgcggccgag
cggcgttcggatcggccggcctccgcccgggcctcggaccctctcaggtgccccatcgag
gccggcagagaaaccgccgttgagatcgttaaagggaacgtcggcctgggtctcagcatc
gttggcggatgtgacactctgctggggtcagtaattatccacgaggtgaatgacggagga
gcagcgcagagagacggtcggctgcaggctggcgaccagatatttgaggtcaacgggatc
gacctgaggcaggccactcacgacgaggccatcggggtgctgagactcgccgcccaacgc
gtggggctgcgcgtcttccgcccccgggcggcctacagggaggaggacctctgggacgtc
ttcgctcttgtcctcaggcctcatcctgtcaaaggcgtgggcttcaccactgtgggtaaa
agtaatgacaccggcatctttgtgtcagatatcatcaaaggaggcgtcacggatttggac
ggcaggctgttgccaggtgaccagattctgtcaatcaacggggaggacgtccgcggggaa
tcgcaagaccttgcggcgaggcttctgcagaattgcagcggcgtgttccacctggaggtg
gctcggttcaaagcgggattgcagtacccggaaccgaaccaggagtacacaaagttgtgt
tttatccagagcgaagactcggactgttccaccttagcaccctcgagcggatccagttct
tctgtcggccaacagagggagacagaatacagaacagataccggcacagcattcgaggac
caacctgactacagaaaagttgttcttcaaaagggcccacgtgactccctcggcatcgct
ttagcaggaggagtgggcagtccccatggcaacgtacctctttttatcgcaaccatggat
accagcggatcagctgccaaaacacagcaattaaagctaggagacaagatcctcagtatc
aacggcgtctccgtggagggaatgactcacgtccaggccggagtcttgctgaagaacgcc
atcggcgccgtcaccctgcaggaggcagccggacgcggccctcgtgatgtcacggccgta
cgccagtcgccgtcgggccggcaaagcgttcacagcaacctctgcactcggatgtacaag
accgtcagtctggatcgagactcttcgggtttgggcttcagcatcgtgggaggcttcggg
agcccgcacggcgaccttcccatttacatcaaaaccatctttaacaagggggcggccatc
gaggacgggaggctgaaacggggcgatcagatcatcgcggtgaacggccagtgtctggag
ggcgtgacccacgccgaagccgtcgacctcctgaagaagaccaaagggacggtaattctg
accgtcctctcgtga
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integrated database retrieval system
