Syngnathoides biaculeatus (alligator pipefish): 133506743
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Entry
133506743 CDS
T09681
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133506743 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133506743 (exosc1)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
133506743 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
133506743 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
133506743
NCBI-ProteinID:
XP_061687154
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All DBs
Position
9:complement(2026683..2034627)
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AA seq
194 aa
AA seq
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MSPMKLCVPGDKLCSVEACTPGTGVYLRHGYIYSSLAGYVLKKNEGEQLPVISVVRETET
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKC
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPLTHAKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccgatgaagctgtgtgttcctggtgataaactttgcagtgtagaagcctgtact
cctggaacaggagtatacctgcggcatggctacatttattcctcactagcgggctacgtg
ctcaagaaaaacgaaggcgagcagttaccagtcatatctgttgtgagagagacagaaacc
caactactgccagatgtcggtgcaattgtcacttgtaaggtgactagcatcaatcccagg
tttgccaaggtccacattctttatgtcggctccacaccgctaaaggaccgcttcagagga
actatcagaaaagaagatgtccgggcaacagagaaagacaaggtggagacctacaaatgt
ttcagacctggagacatcgtcctagcgaaagtgatttctctgggtgacgtgcagtcgaac
tacctgctgacgacggctgagaatgagcttggggtggtggtggcccacagtgaagcaggt
gcacagatggttccaatcagctggtgcgagatgcagtgtccactcacacatgccaaagag
tttcgcaaagtggcaagggtccagccagagtatctgcaggcatga
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integrated database retrieval system
