KEGG   Syngnathoides biaculeatus (alligator pipefish): 133507023
Entry
133507023         CDS       T09681                                 
Symbol
kdm5ba
Name
(RefSeq) lysine (K)-specific demethylase 5Ba isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sbia01009]
    133507023 (kdm5ba)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sbia03036]
    133507023 (kdm5ba)
Enzymes [BR:sbia01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     133507023 (kdm5ba)
Protein phosphatases and associated proteins [BR:sbia01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     133507023 (kdm5ba)
Chromosome and associated proteins [BR:sbia03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    133507023 (kdm5ba)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID JmjN zf-C5HC2 NCH2 Presenilin
Other DBs
NCBI-GeneID: 133507023
NCBI-ProteinID: XP_061687541
LinkDB
Position
10:complement(12514648..12533382)
AA seq 1484 aa
MTQPHLNEFIPPPECPVFEPSWEEFADPFAYINKIRPIAEKTGICKVRPPPEWQPPFACD
VERLKFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHLERKILDLYQLNKLV
NDEGGFEAVCRERRWTKISVKMGFAPGKAIGSHLRAHYERILYPYNLFQTGDNQPQRATL
TNDTKDKVYTPHDLPQRQSVQPQEMCSVARRAKRMRAERGCFKSEAGEDHKNRPNLRRRM
GTYVAKAEPVSMSVKEEPVDYIVTENCAANVSNHIQNGTNSKVEQYMCLVCHSGTEEDRL
LLCDGCDDSYHIFCLIPPLHEVPKGDWRCPKCLAQECGKPQVAFGFEQASRSYTLQTFGD
MADSFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVKNSH
FEVSPEDEHYLTSGWNLNNMPVLDASVLTHITADICGMKLPWLYVGMCFSSFCWHIEDHW
SYSINYLHWGEPKTWYGAPGYAAEHLEGVMKKLAPELFESQPDLLHQLVTIMNPNTLMNN
GVPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTMDWMPVGRGCVKHYRQLNRY
CVFSHDEMVCNIAFKADTVDVDLASAVHKEMVAMVQEEEELREKINKMGVVQTRQVDYEL
LPDEERQCCKCWTTCYLSGITCVCSPGKVVCLYHAQDLCSCPPTNLILHYKFTLDGLYPM
MSSVKLRAESYKEWHNAVQSILEKTENNKRGLEELHNLVEQAETKRFPQTSLLDRLRIVA
AEADKVSVVAQQLLNGKRQTRFRSCGGKSQSHNELTVEELRSFVQQLDNLPCNIRQAPLL
KDLLTRVDEFQHRSERLLSDESPHSVELQELLDLSLGLDVELPQLPLLRERLEQARWLEA
VKQANSRPDNLCLDTMRRLIDQGVGLAPHSSVERAMARLQELLTVSEQLEERMLGLMKAS
PYHSIETLDAALQETENVPAYLPNCLQLKDAVVKAKKWLHEAEALQLGGRIPVLENLSEL
VLRAEGIPVRLDPLSRLEALVSDVQTWKESAAKTFLLKNSPFSLLEVLCPRCDGGDGLHG
SRYKKTKEGTQMSKRSHVKLDSFYDVEKALLESKNSACAMTTLDDVRDKEMETLLALRAS
NESKLLTAENFCALSVCVCQKPPSGAMVQCELCRELFHSGCVAATADLKYGQVWLCPFCQ
RSRKPPLDKVLPLLASLQRIRVRLPEGHALRFLIERTVQWQHRVQQACTGGLLEEVSKMG
KNRYRISQKMGSSFYTEHQCVPVQGLCPELEELMVEGFLLQVTLPETEQLYTYLLYKLAP
LPTQRSSCRKSTEDDELQIESTKQHKKSGGSCHNKETQSVQSKRTKRRKESSDAQHSGKA
KKCCKKKSKRRLDRSEESRGSCSPTHAVSEPAASVSASDSDEDYSLCAAPWCREPEGDEL
NWVQCDGNCNQWFHQVCVGLSSERAEMEDYICISCTQPDFDRGD
NT seq 4455 nt   +upstreamnt  +downstreamnt
atgactcaacctcacctgaatgagttcattcctcccccggagtgccctgtttttgagccc
agctgggaggaatttgctgacccttttgcgtacatcaacaaaatacgacccattgcagag
aaaactggcatctgtaaagtgcgaccgccaccggaatggcagccaccatttgcttgtgat
gttgaaagattgaaattcacaccacgaattcaaagactcaatgagttggaggctcagact
agagtgaagctgaactttctggaccaaatagcaaagttttgggagcttcaaggctgcact
cttaaaatccctcacttggaaaggaaaattttagatctctaccagctcaacaagctggtg
aatgacgagggaggtttcgaggccgtctgcagagaacggcgttggactaaaatctctgtc
aagatgggctttgctccaggcaaggcgatcggctcccatctgagggcgcactatgagcgg
atcctctacccatataacctattccagaccggagacaatcagcctcagagagccactttg
accaatgacacaaaggataaggtgtacaccccacatgacctgccgcagcgccagtctgtg
cagccccaggagatgtgtagcgtagctcgtcgtgcaaaacggatgagagctgaaagaggg
tgcttcaaaagcgaagctggggaagatcacaagaatcggcccaatctcaggaggagaatg
ggaacatatgttgccaaagcagaacctgtgagcatgtcggtgaaagaggagcccgttgac
tatattgtgacagaaaattgtgcagcaaatgtgtcaaatcacattcaaaatggtacaaac
agtaaagtggagcaatacatgtgcctagtgtgtcacagcggaactgaggaggaccgacta
ttgttgtgtgatggctgcgatgatagctatcacattttctgtctcatccccccattacat
gaggttcccaaaggagactggagatgccccaagtgcctcgcgcaggaatgcggcaaaccc
caggttgcttttggctttgagcaggccagcaggagctacaccctgcaaacctttggagat
atggctgattcctttaaatcagattatttcaacatgccagttcacatggttccaactgag
ctagtggagaaagagttttggcgtctagtcagcactatcgaggaggatgtgactgttgaa
tatggagcagacattgcgtccaaggagttcgggagtggtttccccgtgaagaatagccat
tttgaagtgtctcctgaggatgagcattacctaactagtggctggaatctgaacaacatg
cctgtgctggatgcctcggtcctgactcacattacagctgacatctgtgggatgaagtta
ccctggctctatgtgggcatgtgcttctcctccttctgctggcatattgaggaccactgg
agctactcaataaactaccttcactggggtgagccaaagacatggtatggggcaccaggt
tatgctgcagagcacttggagggtgtcatgaagaaactagctcctgaactctttgaatca
cagccagatctccttcatcagcttgtcaccatcatgaatcccaacacattgatgaacaac
ggcgttccgatctatcgtaccaaccaatgtgcaggagagtttgtcatcaccttccccaga
gcataccacagtggattcaaccaaggtttcaactttgctgaagcagtcaacttctgtacc
atggactggatgcctgttggccgaggctgtgtgaaacactatcgccagttgaatcggtat
tgtgtcttctcccacgatgagatggtctgcaacattgccttcaaagcggatacagtggat
gtggacctggcctccgccgtgcacaaggagatggtcgccatggtccaagaagaagaggaa
cttcgagagaaaatcaacaagatgggtgtggttcagacacggcaagtagattatgagctg
ctccccgatgaggaacggcagtgctgtaagtgttggaccacctgctacctgtctggcatc
acttgtgtctgcagtcctggcaaggtggtctgcctgtaccacgcccaggacctctgctcc
tgtccacctaccaacctaattctccattacaaatttacactggatgggttataccccatg
atgtcgtcagtgaagttgcgtgcagagtcctataaggagtggcataatgctgtgcagagc
attctagagaagactgaaaacaacaaaagaggtctggaagagcttcacaacctggtggag
caggcagagacaaaaaggttcccacaaaccagccttttggatcggctgcgtattgttgcc
gcagaagctgacaaagtctctgtggtagcacaacaacttctcaatgggaagaggcagaca
aggtttcggtcttgtggggggaagtctcaaagccacaatgagttgactgtggaagagctc
cgctcttttgtccaacagttggacaacctaccatgtaacataagacaagcacctttactg
aaggacctgctgactcgggttgatgaattccagcatcggagcgaaaggctcctctctgat
gagtctcctcactctgtcgagcttcaggaactgctggatctgagcctgggccttgatgta
gagctgccccaacttcctctgctcagggagaggctggagcaggcccgctggctggaggct
gtgaagcaagccaatagtaggccagacaacctttgcctggacaccatgaggaggctgatc
gaccagggcgtgggtttagcacctcacagttcggtggaaagagctatggctcgccttcag
gagctcctgacggtgtctgagcagctggaggagagaatgctcggccttatgaaagccagt
ccatatcacagtatagaaacacttgatgctgcgttacaagaaacggaaaacgtccctgct
tatctgccgaactgtctgcagctgaaggatgctgtggtgaaggccaagaagtggcttcat
gaagctgaagctctgcagctgggggggcgtattcccgtgctggaaaacctttctgagcta
gtactcagggcagagggtattcctgtgaggctcgaccctctcagtcgactggaggcactg
gtcagtgatgtgcagacctggaaggaaagcgctgcaaaaacattcctgctcaaaaactca
cccttttctctcttggaggtgctgtgtccaagatgtgacggaggagatggacttcatggg
tcgagatataaaaaaacaaaagagggaacacagatgagtaagagatcacatgtaaagctg
gactcgttctacgatgtggaaaaggcacttttggaaagcaaaaactctgcctgtgctatg
accaccctcgatgacgtccgcgacaaggagatggagaccttgttggctctgagggcttca
aacgagtccaagcttctcactgctgagaacttttgtgcacttagtgtgtgtgtttgccaa
aagccgccctcgggggccatggtccagtgtgagctctgtcgtgagcttttccacagtggg
tgcgttgcagcaaccgcagacctcaaatacggtcaagtttggctttgccccttttgccag
cgttcgaggaagccacccctggacaaggtattgcctctgctggcatcactgcaaaggatt
cgggtccgacttcctgagggacacgccctacgcttccttatcgagcggactgtgcagtgg
cagcacagagttcagcaggcctgcacgggtggactcctggaggaagtttcgaagatggga
aaaaacagatacagaatatcgcaaaagatgggctcgtctttttatacagaacaccagtgt
gttccagtccagggactttgccctgagctggaggagctgatggtggaggggttcctactg
caggtcacacttccagagactgagcaactttacacatacttgctgtacaaactggctcct
ctgcccactcagagatcctcttgtaggaaaagcacagaagatgacgaactccagatagag
agcacaaaacagcacaaaaagagtggagggtcatgtcacaataaagagacacagagcgtt
cagagcaaaaggaccaagcgacgcaaagaaagctctgacgctcagcactcagggaaggcc
aagaaatgttgcaaaaagaagtccaagaggagacttgaccggagtgaagaaagcaggggg
agttgctcccccacgcatgcagtatcagaacctgctgcatctgtgtctgcatctgattca
gatgaggactactcgttgtgcgccgcgccctggtgcagagagccagaaggagacgagtta
aactgggtccagtgtgatggaaactgcaatcagtggtttcaccaggtctgtgtgggactg
tcttctgagcgtgcagagatggaagactatatttgcataagctgcacacagccagacttt
gacagaggggactga

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