Syngnathoides biaculeatus (alligator pipefish): 133507024
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Entry
133507024 CDS
T09681
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D isoform X1
KO
K15181
negative elongation factor C/D
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133507024 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133507024 (nelfcd)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
133507024 (nelfcd)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
133507024
NCBI-ProteinID:
XP_061687543
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Position
10:complement(12505752..12513611)
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AA seq
591 aa
AA seq
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MDEEYYSGPGDWEGPDGNTEDAYVDVENLGKIQEDCLKKFSSRDYIMEPAIFNTLKMYTP
IRVFPPSFRYFQAGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHL
KSLLIKHFDPQKADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLI
SDAGYQGEITSVSTACQQLEVFSRVLRTSLATLLDGGEENLEKNLPEFAKMVCHGEHTYL
FAQAMMSILAQEEQGGSAVRRIGQEVQKSAHKRGHDASQITLALGTAAAYPRACQALGAM
LSKGALNPADITVLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHI
LAYAASVVETWKKNKRVNINKDELKSSSKAIETVHNLCCNENKGATELVAELGTLYQCIR
FPVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLIKLFET
EHSQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLD
VIAPPYTSDFVQLFLPILENDSIAGTIRAEGEHDPVAEFIAHCKSNFIMIN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaatattatagcggcccgggggactgggaaggcccggacggtaacacggag
gatgcatacgttgatgttgagaatctgggcaaaatccaagaggattgtctgaagaagttt
tccagcagggattacatcatggagcctgccatctttaacaccctcaaaatgtacacaccc
atccgtgtgtttcctcccagtttcaggtatttccaggcgggtggttctccagaacatgtc
atccagcttctgtcggaaaactactctgccgtggctcagactgtgaacctgctggccgag
tggctcatccagatgggtgtcgaacctgcgcaagtacaagaacgagttgaaaatcacctg
aagagtctgctgataaaacacttcgaccctcagaaagcagattctattttcaccgtagag
ggagagactcctgcttggctggagcagatgatcgctcacacgacttggcgagacctcttc
tacaagttggccgaggctcatcctgactgtttgatgctcaacttcactgtcaagctgatt
tcagacgcgggttaccagggtgaaatcaccagtgtgtcaacggcatgccagcagctggag
gttttctctcgagtactgaggacatctttagccactctgctggatggaggagaggagaac
ctggagaagaacctgccagaatttgctaaaatggtgtgtcacggtgagcacacttacctc
ttcgctcaggcgatgatgtcaatcctggcgcaggaagagcaaggcggctccgctgtgcgc
cggatcggtcaggaagtacagaagtcggcacacaagaggggccacgacgccagtcagata
acgcttgcgctgggtacagcagcagcctaccctcgtgcctgccaggcgctgggtgctatg
ctgtccaaaggagccctgaatccggccgatatcacggtgctgtttaagatgttcagcagc
atggacccgcctcctgtggagctgatcagagtgcccgcttttctggacctcttcatgcag
tcgctgttcaagcccggctccaagattaaccaagaccacaagcacaaatacatccacatc
ctggcctacgctgccagtgtggttgagacgtggaaaaagaacaagcgtgtcaacataaat
aaggatgaactaaagtcgtcctccaaggccatcgagacggtgcacaacctttgctgcaac
gagaacaaaggcgccacagagctggtggccgagcttgggactctgtaccagtgcatacgg
ttcccagtggtggccatgggagttttgaagtgggtggactggaccgtgtctgagccgcgc
tactttcagctacagactgatcacacccctgtccacttggctctgctggatgagatcagc
acgtgccaccagctgctccatcctcaggtcctccaactactcatcaagctctttgagacg
gaacactcgcagctcgacgtgatggagcagttggagctcaagaagaccctcctggaccgg
atggttcatctgttgagtcgtggttacgttcttcccgtggttggctacattcgcaagtgt
ctggaaaagctcaacaccgacatctccctcattcgctattttgtcaccgaggttctggac
gtgatcgcaccgccgtacacgtcggactttgttcagctcttcttgcccatcctggaaaac
gacagcatcgcaggaacgattcgggcagaaggagaacatgaccccgtcgcggagtttatt
gctcattgcaagtcaaatttcatcatgattaattaa
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