Syngnathoides biaculeatus (alligator pipefish): 133507176
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Entry
133507176 CDS
T09681
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
133507176 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133507176 (nhej1)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
133507176 (nhej1)
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Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
133507176
NCBI-ProteinID:
XP_061687960
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All DBs
Position
2:9642144..9660211
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AA seq
316 aa
AA seq
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MEATGASTDVLLQKPWLPVAIDSCQLLAKCFFGETRYHILLTDLHCVWEETLHSTGIQTR
AQELNKRLQAPVKAFFSHLCEVVQPCLSASDVPPKGEAAISVMQLDAGDLILRLKSKLAG
LPFYWEFRCTPAPVTVVCLHLVQPLLSMSHVLNRQVEQLGDLVSRKDAEIQDYKENGATL
SRARLQTDIFERHIYKDSFLEKTLPVVCSDHHGIWDFGGDLQELYTAIVSHRITRKHKLS
EQDQLVTTDPDPTASSGAEAGAEGGKADSESNHISPVEEVGDHMVHTAKAPQLVACDRAE
RASSKAKKKKVVGLFR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggaggccactggagcatccacagatgttcttctgcagaaaccttggcttcctgttgcc
attgatagctgccaactgcttgccaagtgtttctttggggagacaaggtaccacatcctg
ttgactgacctgcactgcgtgtgggaggagactttgcactcgacaggcatccagacccgt
gctcaggagctgaacaagcgtctgcaagccccagtcaaagcattcttctcgcacctgtgc
gaggtggttcagccgtgtttgtctgccagtgatgtgcctcccaaaggtgaagctgcgatc
tctgtgatgcaactggatgccggtgacttgattttgaggctgaagagcaagctagcaggg
cttcccttctattgggagtttcgctgcacccctgctcccgtcactgtggtgtgtcttcat
ctggtacagcccttgctgtccatgagccacgtgctgaaccgccaggtggagcagctggga
gacttggtgagcaggaaggatgctgagatccaggactacaaggagaatggagccacactc
agcagagcacgcctgcagacggacatttttgagcggcacatttacaaagacagcttcctg
gaaaagactcttcctgtggtttgctctgaccatcatgggatctgggactttggaggagac
ctccaggagctttacactgccattgtttcacacagaatcacacgcaaacacaagctgtct
gagcaggaccagttggttaccacagaccctgacccaacagcttcctcaggcgctgaagcc
ggtgccgagggtggaaaagctgacagtgagtcgaaccacataagtccagtggaggaagtt
ggagaccacatggtccacaccgccaaggcaccgcagctcgttgcctgtgatcgtgctgag
cgagcgtcttccaaagcaaagaagaagaaagtggtgggcttgttcagatga
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integrated database retrieval system
