Syngnathoides biaculeatus (alligator pipefish): 133507221
Help
Entry
133507221 CDS
T09681
Name
(RefSeq) transcription factor SOX-13-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133507221
Transcription factors [BR:
sbia03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
133507221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
133507221
NCBI-ProteinID:
XP_061688028
LinkDB
All DBs
Position
10:complement(682639..754115)
Genome browser
AA seq
618 aa
AA seq
DB search
MDFSPHLSRMVEPSSPAMHLLSNMEGSLTCVGVKVERDDISRGTGLINTEPTLKMSPSRD
WVGSQPLMARQLTPPLSCSPLEGSPSKDMPHLQTQVTLKETKLQDPPKGQSKEGNPESLA
EKELQLLMMINQLSGLREQLLGAHSEQRNMAALLLEKQQQQMELARQQQEQIAKQQQQLI
QQQHKINLLQQQIQVNMPYVMIPAFHPNAQSLSVPSDPQINLPLQPIPYKPAVDYPMPLL
SPPLKRSGRSIRQEAGQPLNLTSKPKGLELGKAHSPKCMEVGSLAVQGTYIHRDMPKDGS
DSPPRSALTLFRDSDVVTQAIHDAQQLLRSHNAGVQERDTQRETNRETSRKLVSNSPNER
KYPPCGERIVHAEQGDDRHTLLSTDDHLSSDSESTLQVRGSYSEPRPPPSSGHIKRPMNA
FMVWAKDERRRILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLERYPD
YKYKPRPKRTCIVEGRRLRVGEYKAMMKSRRQEQRTPYTRSPTEPQSIHYSPNDALYLAG
GGGGSSASMPSMSFHSSLLEHYLPQPQQTSHRVETPATVAPLPRLRQTDQELEQAPYSEG
EESDRGERSEGELVLLTD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggatttctctccacatctgtcaagaatggttgagcctagctctccagcgatgcacctc
ctctccaatatggaaggcagcctgacatgtgttggtgtgaaagtagaacgtgacgatatc
agtagaggaactggactcatcaacaccgaacctactctaaagatgtccccctctcgtgac
tgggttgggagtcagccactgatggctcgtcaactgaccccaccactttcctgttcacct
ttggagggttctccaagtaaagacatgccacacttacaaacccaagtgacactcaaggag
acaaagctccaggatccaccaaaagggcagtccaaggaaggaaacccagaatctctagca
gagaaggagctccagttgttaatgatgatcaaccaactgagtggactcagggagcagctc
ctgggagcccactctgagcagaggaacatggctgccttgcttctggaaaaacagcagcag
caaatggagctagcccggcagcaacaagaacagattgctaaacaacaacagcagctgatc
caacagcagcacaagatcaaccttcttcagcagcagattcaggtaaacatgccctacgtg
atgatccctgctttccaccccaacgcccagtctctttcagtcccctctgacccacagata
aacttgccattgcagccaatcccttacaagccagctgtggattatcccatgccactactg
tccccgcccctcaagaggagtggtcgttccatccgacaggaagcaggtcagcccttgaat
ctgacatccaagcctaaaggactggagctggggaaagcccatagtccaaaatgcatggaa
gtgggatcactggcggtgcagggcacctacatacacagagatatgccaaaggatgggtca
gacagcccaccgcgatctgccctcactttattcagagacagtgatgtagtcacccaggcc
atccatgatgcccagcagctactgaggagtcacaatgctggagtccaagagagagacaca
cagagagaaaccaacagagaaaccagcagaaaattggtcagcaactctccaaatgagcgc
aaatatcctccttgtggtgaaagaattgtgcacgctgagcaaggtgacgaccggcacaca
ttgctgtccactgacgaccacctcagcagtgactctgagagtactctgcaggtccgaggc
agctactctgaaccgcgcccacctccgtcttcaggccacatcaagagacccatgaatgcc
ttcatggtttgggccaaggatgaacgcaggagaatcctgcaggcctttcctgatatgcac
aactcctccatcagcaaaatcctgggctccaggtggaagtccatgtccaaccaggagaaa
cagccttactatgaagaacaggccagactgagcaggcagcacctagaacgctaccccgac
tacaagtacaaaccccggcccaaacgcacatgtatcgtggaggggcggaggctgagggtg
ggcgaatacaaagccatgatgaagagccgcagacaggaacagaggacaccctacactagg
agtccaacagaaccacagtctatccactactctcccaacgacgccttgtacctggccggt
ggcgggggcggcagctccgcctccatgccgtccatgtcctttcactcctctctcctggag
cactacctgccgcagccacagcagacgtcacaccgagtcgagaccccagccacggttgcc
cctctgccccgtttgaggcagacggaccaagagctggagcaggcaccgtacagcgaagga
gaggaaagtgacagaggggagagaagtgagggggaacttgtgctcctcacagattga
DBGET
integrated database retrieval system
