KEGG   Syngnathoides biaculeatus (alligator pipefish): 133507249
Entry
133507249         CDS       T09681                                 
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a
  KO
K14966  host cell factor 1
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03083  Polycomb repressive complex
sbia04980  Cobalamin transport and metabolism
sbia05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    133507249 (hcfc1a)
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    133507249 (hcfc1a)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    133507249 (hcfc1a)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sbia01009]
    133507249 (hcfc1a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sbia03036]
    133507249 (hcfc1a)
   03029 Mitochondrial biogenesis [BR:sbia03029]
    133507249 (hcfc1a)
Protein phosphatases and associated proteins [BR:sbia01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     133507249 (hcfc1a)
Chromosome and associated proteins [BR:sbia03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     133507249 (hcfc1a)
   HMT complexes
    COMPASS/SET1 complex
     133507249 (hcfc1a)
    MLL-HCF complex
     133507249 (hcfc1a)
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     133507249 (hcfc1a)
Mitochondrial biogenesis [BR:sbia03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    133507249 (hcfc1a)
SSDB
Motif
Pfam: Kelch_3 Kelch_5 Kelch_4 Kelch_1 Kelch_6 fn3
Other DBs
NCBI-GeneID: 133507249
NCBI-ProteinID: XP_061688078
LinkDB
Position
10:4661939..4685035
AA seq 1709 aa
MSVPGSAVTGTSASVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELR
AGSSVVAWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVSGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDTMCWETVLMDTLEDNIPRARAGHCAVSINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAVASPAMSSIPSQ
PVNSPKSPAPAAAAPSPQTLSQAAVLKVATQQSATGASVVTVRPSQPGKSPVTVTSLPPG
VRMVVPAQATQGSPIGSSPQMSGMAALAAAAAATQKIPPSSAGTVLNVPAGATILKTVAV
SPGTTTVKVASPVMVSNPATRMLKTAAAQVGTAGTSSPTTTTRPIITVHKSGAVTVAQQA
QVVTTVMGGVTKTIALVKSPLTMGSGGTLISNLGKMMSVVQTKPVQTSAVTGQASTNPLT
QIIQTKGPLPAGTILKLVTSADGKPATIITTSQAGGAGNKPTILNISGVSSNAAKQGPTI
IKTIPMSAIMTQPGATGVTSSTGMKTPITILTTKVMTAGTPGKIITAVPKLGTAAGQQGL
TQVVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTSLGTVT
GTVSTSLAGGTVDTANASLVTPITTLGTIATLSSQVISSPAITVSAAQTTLTSANTLPSS
SITVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSSEAGAAGDGSGTVTLVC
SNPPCETHDTGTTNTATTSSANIGAGQVCSNPPCETHETGTTTTATMSSAIIGAEQVCSN
PPCETHETGTTNTATMASSNMPALRVCSNPPCETHETGTTNTATTASASMGRVQQVCSNP
PCETHVTGTTNTSTQASSNMSEGQTSTVQRVCSNPPCETHETGTTNTPSTATSNMGGDQT
SSATGAVQRVCSNPPCETHETGTTNTATTATSNLEAGEGTAAQQTDDVTEGTSSTEEASS
TAAVVTTTQGRAITTVTQSTPVPGPSVPSISSITEGGSAEATTEEPMQTDETASAEAVPA
EEATPMETQAEGDAVATATALNLPSELMSEGQGATLMVTGLSDEELAVTAAAEAAAQAAA
TEEAQALAIQAVLQAAQQAVMNEGDAAGEGQQTTTIPIMLTQQELAALVQQQQQLQEAQA
ATQQSAVDTSMPTEGLAPADSLNDPSVESNGHSEMAAAVTSAVASLLPRTTAETLAPSST
FAPVVSVASPAKLQAAAALAEVANGIEGEKQAPQPTPVKPAVKKENQWFDVGIVKVTNMV
VTHFYVPADDSQGDDDSGVIPDYGQMKKMELQPGTAYKFRVAGINACGRGAFSEISAFKT
CLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSNQTAEAKASTPAQL
AFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESGKD
GASAKPAPKRPGTSPDTKTTGPKKARTDQ
NT seq 5130 nt   +upstreamnt  +downstreamnt
atgtctgtccctggctccgcggtgactgggacctcggcgtcggttctgcaaccgcggtgg
aaacgggtcctcggatggtcgggtcctgttccccggcccagacatggacacagagccgtg
gcgataaaggaactgatggttgtgtttggcggtggaaatgaagggatagtggacgaatta
catgtctacaatactgcaacaaaccagtggtttatccctgctgtccgtggtgacattcca
ccaggatgtgctgcctatgggtttgtctgtgatggcacaagattgctggtatttggtggt
atggtggaatatggaaagtacagcaatgatctttatgaattacaggccagccgatgggaa
tggaaaaagttaaaagcaaaaaatcccaaaaacgggccccctccctgtccacgtcttggt
cacagtttttccttggtgggaaacaaatgttacttgtttggcggacttgccaatgacagt
gaggacccgaaaaacaacattccgagatacctgaatgatttgtacatactcgagcttcgt
gccgggtccagcgttgttgcatgggatattccaatcacgtatggagtcctgcctcctcct
cgtgaaagccacactgcagtggtttacacagaaaagacaagtagaaaatctcgactgata
atttatgggggaatgagtggatgtcgtcttggagatttgtggactcttgacattgatacc
ttaacatggaacaaaccatcagtgagcggcacagcaccacttcctcggagtctacattct
gccactaccatcacaaataagatgtatgtttttggcggatgggttcccttagtaatggat
gatgtcaaagtggccacacatgagaaagagtggaaatgcacaaataccctagcctgttta
aatctcgataccatgtgctgggagacagtgttgatggacacccttgaagacaacattccc
cgggcccgtgctgggcattgtgctgtgtctatcaattccagactgtatgtttggagtggt
cgtgatggataccgtaaagcatggaacaaccaagtctgttgtaaagacctctggtacctt
gaaaccgagaggccacatgcccctgctcgagtgcagttggtccgtgccaataccaactct
ctagaagtgagctggggtgcagtttccactgcagacacatacttgttgcagctgcagaaa
tatgacatccctgcaactccagctgtagcctcgccagccatgagttcaatcccctctcaa
cccgtgaactctcctaagagtcccgctccggctgctgcagccccttcaccacagactctt
tcacaagctgctgtgttgaaggttgctactcagcaatctgccacaggtgcatctgttgtc
acagtacgcccaagccagcctgggaaatctcctgtaactgtgacgtcccttcctcctggt
gtcagaatggttgtgcctgcccaggctacacaaggctcgccgattggtagtagccctcag
atgagtggaatggcagcattagctgccgcagctgcagcaacacagaagattccaccatcc
tctgctggaacagtcctcaatgttcctgcaggtgccacaattctcaaaacagtagctgtt
tcccctggcacaaccacagtgaaagtcgcttccccagtcatggtcagtaaccctgccaca
cgcatgttgaaaactgctgcagcgcaggtgggtactgcaggcacgtcctcgcccaccact
actacgaggcccatcatcactgtgcacaagtctggcgcagtgactgtggctcagcaggcc
caggtggtaaccactgtgatgggaggcgttaccaagaccattgccttggttaagagtccc
ctcaccatgggcagtggtggcactctgatatcaaaccttggcaagatgatgtctgtggtt
caaaccaaaccagtgcagacatcagctgtcacgggtcaggcttccactaaccctctcacc
caaataattcagacaaagggtcccctgccagccggcactattctgaagctggtgacctct
gcagatggaaaacctgcaacgatcatcaccacctcccaggctggaggtgccgggaacaag
cctacaatccttaacatcagtggcgtctcttcaaatgccgctaaacaaggccccaccatt
attaaaaccatcccaatgtcggccatcatgacccaacctggagcaacaggtgtgacaagt
agcacaggaatgaaaacacccattacaatccttacaaccaaggtgatgaccgctggaacg
cctggcaaaattatcactgcagtgcccaagcttggaactgcagctggccagcagggattg
acacaggttgttttgaagggtgccccagggcagccagggactattttgcggactgtaccc
atgagcacagttggtggtgtacgacttgttacgccagtgacagtatctgctgttaaaccc
actgtcacaaccctggttgtcaagggaacaactggtgtcacctctcttggcacagtcact
ggtacagtctccacaagcctggcaggtggcactgtggacactgctaacgcatctctggtt
actcccatcaccacattggggaccattgctaccctgtcgagtcaggtcatcagttcgcct
gcaataactgtatctgctgcccagaccaccctaacgtctgcaaacacattgccctcgtcc
agcatcacagtgcagaaccagcccacccaggtcactctgatcacaactcccagtggtgta
gaagcacaaccagttcaggatcttccagtgtcaatcctggcttcacccacctctgagcag
cctagctcctctgaagctggagctgctggagatgggtctgggactgtaactttagtctgc
tctaacccgccgtgtgagacacacgatacaggaactactaatacagccacgacatcgtct
gccaacattggcgcagggcaagtttgctccaatccaccctgtgaaacccatgaaactgga
accaccaccacagccacaatgtcctctgctataattggagcagaacaggtctgttcaaac
cctccttgcgagactcacgaaacgggaaccaccaacacagctacgatggcatcttcaaat
atgcccgctctgcgtgtgtgctccaacccgccatgtgagacccatgaaacggggacaacc
aacacggcaaccacagcatcagctagcatgggaagagtccagcaggtgtgctccaatcct
ccctgtgagactcatgtgaccggtaccaccaacacatccacgcaagcatcctccaacatg
agtgaaggccaaactagcacggtgcaaagggtttgctcaaacccaccttgtgaaacgcac
gagacagggacaactaacacgccatcaacagccacctccaacatgggaggggaccagacc
agctcagcaactggtgccgttcaaagagtttgctccaacccaccttgcgaaacacacgaa
actgggaccaccaacacagccaccactgccaccagcaatcttgaagccggagagggcaca
gcagctcagcagacagatgatgtaactgaaggcaccagcagcactgaagaggcctcttcc
actgcagcagttgttaccaccacccaggggagggctatcactactgtcactcaatccaca
cctgtccctggaccatccgtaccttcgatctcgtcaatcacagagggggggagcgcagaa
gccaccacagaagagcccatgcagactgatgaaactgcatcagcagaagctgtacctgca
gaggaagcaactccaatggaaactcaggcagaaggagatgcagtagccacagccacagcc
ttgaacctgccatcggagctcatgtctgaaggccagggggccacactgatggtaacgggg
ctctcagacgaggagctggctgtcacagcggctgcagaggccgctgctcaggcagcagct
actgaagaggcccaggccctggccatccaagctgtcctccaggctgcccagcaagctgta
atgaatgaaggcgatgcagctggagagggccagcaaaccaccaccatccccatcatgctg
acacagcaggagcttgcagcactggtccagcagcagcagcagcttcaggaggcccaggct
gccactcagcaaagcgctgtagacacaagcatgcccactgaaggcctcgctcctgctgac
agccttaacgacccctctgtggagagcaacgggcacagcgagatggctgccgcagtaaca
agtgcagtggcctccctcctaccacgtaccactgctgagacactggccccttcgagtaca
tttgcaccggttgtgtcagtggccagcccagcgaagctgcaagcagcagctgcactagct
gaagtagccaatggcattgagggcgagaagcaagcccctcagccaacccctgtgaagcct
gctgtcaagaaagagaatcagtggtttgatgtcggaattgtaaaagtgacaaatatggtt
gtcactcacttctacgtgccagcagatgattcacagggagatgacgactccggagtcatt
ccagactacggccagatgaagaaaatggagcttcagcctgggacagcgtacaaattccgt
gtagctggaatcaatgcttgtggccgtggggccttctcagagatatctgcttttaagact
tgtttacctggcttccctggcgccccgtgcgccatcaaaatcagcaagagcccagatggc
gctcacctgacctgggagcctcccagtgtgacgtcggggaagatcatagagtattccgtg
tacctggccatccagagcaaccagacggccgaggccaaggcctccaccccagcccagtta
gcatttatgcgcgtgtactgtggtcccaacccctcttgcctggtgcagtcttccagcctc
tccaacgcccacattgactacaccaccaagccagccatcatcttccgcatcgccgcccga
aatgagaagggctacggtcctgccactcaagttcgatggctgcaggagtctggcaaagat
ggcgcctctgcaaaaccggcacccaaaagaccaggcacctctccggatactaagactact
ggtccaaagaaagcaaggacggaccagtga

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