Syngnathoides biaculeatus (alligator pipefish): 133507291
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Entry
133507291 CDS
T09681
Symbol
optc
Name
(RefSeq) opticin
KO
K08127
epiphycan
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sbia00535
]
133507291 (optc)
Proteoglycans [BR:
sbia00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
133507291 (optc)
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GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRRNT
LRR_9
S_layer_N
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
133507291
NCBI-ProteinID:
XP_061688173
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All DBs
Position
10:171570..194578
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AA seq
334 aa
AA seq
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MQKISKFEMIVSLASMMVAFALIFLGPRPGLMAPLDGTEDDRFDLENSDLISVTDWDNLD
THIYGDNDDYDDQEIEVETVAANIHPIASHAKVDHLEVKVTRPSLPPLPVTLDFRGSGLF
EPETRLGMPTCLLCICIRGSVYCDDTGLKQIPPLPKDTRHFYGRFNSIRHVRNNDFINLS
RLQSIDLTGNQITEMDEDVFRPLQQLHDLLLADNKLQALPELPLTLKHIDLQNNKLISRG
IHSESFKDMSQLEYLYLSNNKLDYIPTPLPLSLRVLHLKGNNIQSLHEDTFCNSHDRHFS
RWNLEDIRLDANPLDVNLFPQAYFCLPRLPVGSH
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatctccaaatttgagatgattgtgtctttggcatctatgatggtggctttt
gccctgatcttcctgggtcccaggcctggcttgatggccccacttgatggaacagaggat
gatcgttttgacctggagaactctgacttgattagtgtaacagactgggacaacctggac
actcatatttatggtgacaatgatgattatgacgaccaagagattgaagtagagactgtt
gcagcaaacatccacccaatagccagtcacgcaaaagttgatcaccttgaggtaaaagtg
actcggccttctttgcctccattacctgtgacactggacttcagaggttctggtctattt
gaacctgagaccagactgggaatgcccacctgccttttgtgtatatgtatcagagggagt
gtatactgtgatgacacaggcctcaaacagataccacccctgccaaaggacacaaggcat
ttttatgggcgtttcaacagcatccgacacgtcaggaacaatgacttcataaacctaagt
aggcttcagtctattgacctcaccggaaaccagattactgaaatggatgaagatgtgttt
cgcccgctacagcagcttcatgacttgttgttagctgacaacaaactacaggccttgcca
gaacttccacttaccttgaagcacattgatctacaaaacaacaaactgatcagcagagga
atccattcagagtctttcaaggatatgagtcagctggaatacctctacctatctaataat
aaactggattatattccaacaccactgccattgagtctcagagttttgcacctaaagggc
aacaacatccagtccctgcatgaagacaccttctgtaacagccacgatcgtcacttcagt
cggtggaacctggaggacatccgcctggatgccaatcctttggacgtcaatctctttcct
caggcctatttctgcctgccacgcctgcctgtaggaagtcattaa
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