Syngnathoides biaculeatus (alligator pipefish): 133507302
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Entry
133507302 CDS
T09681
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133507302
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133507302
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
133507302
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
133507302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT
HEAT_EF3_N
XMAP215_CLASP_TOG
TOR1L1_N
Cnd1
CEP104-like_TOG
HEAT_EZ
Adaptin_N
HEAT_DAAF5
MMS19_C
TAN
Paxt-1_C
Motif
Other DBs
NCBI-GeneID:
133507302
NCBI-ProteinID:
XP_061688193
LinkDB
All DBs
Position
2:9792961..9821522
Genome browser
AA seq
1412 aa
AA seq
DB search
MDQAANPQYVWERLIGGFKHKNNRTREGLCLCLIATLNMFGSQSLTLSKIVPHICNLLGD
PTSQVRDGAMSCLVEIYRHVGERVRIDLGKKGLPQSRLNVIFSKFDEVQRSGSMVLSPLS
ALSPATDKNSEDDDSLDGGCSSSSSKAEMLAGRKTLVGSFRRSVTSNKSPGRDGSAAGAV
DEGDFIQAFEDVPAMQIYSNREVEEAMAKIRDVLSDDKRDWELRVAALKKVRSLLLAGAV
DFDGFPQQLRLLESAFRLSAKDLRSQVVRETCITLGHLSSVLGTRFDHAAEAILPTLLHL
VPNSAKVMATSGVAAIRLILRHTHYPRLIPIITSNCISKSVAVRRRCYEFLDLQLKEWHT
NSLERHMAVLMETIKKGIHDADAEVRSVTRKCYWNFHVHFSREAEQLFQCLESSYQKALQ
AHLRSGDTLMSLPPSDHSSSSSQESLNRTLSPRNNTGRSVTRCKATQASRRPPATSPGSL
QRSCSDVDVNAAATARTRMPTVASAVQVSTSSFSSASALPPGSYASLGRVRTQRTNTGKR
PSVPDSRVHSKGKVVSQSQPSSRSGSPGRMLTSTHGRMVRMPVGNATTAANSSLSNSRRP
RGHRSQGCSRETSPTRSGSARSRIPRLSMSQGCSRETSRESSRDTSPTRGFPPLDRLSHQ
AQISASVNAMRILNTGTEVEAAVADALLLGDLRSKQRSVRRHFESSGMFSDDDANSDASS
ACSERSYSSRNGGVRHTEDVAEILNHCASANWSERKEGLLGLQHVLKSHRILSRVELKRL
CEIFTRMFADPHSKVFSMFLETLVDFIVLHREDLHDWLFILLTQLLKKMGADLLGSVQAK
VQKALDVTCESFPYEQQFNILMRFIVDQTQTPNLKVKVAILRYIEALAHRMDPADFVNTS
ETRLAVSRIITWTTEPKSSDVRKHFFHSPNSQTLHNWEDLSGRASTVSSLPGEGNLEERC
KQAAQVVLIALFELNTPEFTMLLGALPKTFQDGTTKLLHNHLKSRSGISMTSPMSSTGQT
APRQPSSRSSPLTSPTTCSHGGLSPSMLEYDGENLNSEEIDSSLRSVTEAIRNFSYRSQE
EAIEPQKRDGTRDAMFGVGAPTHADLRLYGDVVDAGRTALDNKTSLLNTPFPRSFTLQRF
REYNPHNYDVMELRQHARQQECVENEIQNPRNVPGVTEQLVGQLLKELSQGGGEERRATL
LELLKLAREDSQVVWDEHFKAILLLLLEMLSDKDYMIRALALRVLKEILRNQPSRFKNYA
ELTIMKTLEAHKDSQKEVVRAAEEAASTLAVSIHPEQCIKVLCPIVQTADYPINLAAIKM
QTRAIERITKEPLHQLLHDIIPGLLQGYDDTESSVRKASVFCLVAIYTVIGEELKPYLSQ
LTGSKMKLLNLYIKRAQASTSNSSSSSDISSY
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggccgccaacccacaatatgtttgggagcgcctgattggaggcttcaaacat
aagaacaaccggacgcgagaaggactctgcctttgtctcatcgcgaccttaaatatgttt
ggatctcagagcctgacgctaagcaaaatagttcctcacatttgtaaccttctcggagac
cccacaagtcaggtgcgtgacggagccatgagttgtttggtggagatctaccgtcatgtc
ggtgaacgagtgaggattgaccttggaaagaagggcctacctcagtctcggttgaatgtc
atttttagtaaatttgacgaagtccaaaggtcgggaagcatggtcctgtcaccactgtca
gccctctcccctgccacagataaaaattccgaggatgatgattcactggatggtggctgc
tcttcgtcctcatccaaagcagaaatgctggccgggaggaagactttagtgggttcattt
cgacgctcagtcaccagcaacaagtcaccggggagagatgggtctgctgctggcgcggtg
gatgagggtgacttcattcaggcttttgaggatgttcccgctatgcagatttactccaac
agggaggtggaggaggccatggccaagattcgagatgtgttgtcggatgacaagcgtgac
tgggagctccgagttgcggcgctgaagaaagtgcgctctctcctgttggctggagcagta
gactttgacgggttcccgcagcagctgcgtctcctggagtctgcattcagactgtccgcc
aaagacctgcgttcccaggtggttcgggaaacctgtatcactctgggacacctgtcctcc
gtgctcggcactcgctttgatcatgctgcggaggccatcctgcctaccctcttgcacctg
gttcccaatagtgccaaagttatggccacctctggagtggctgccatccgcctcatccta
agacacacacactaccctcgtttgatccctatcatcaccagcaactgcatctctaagtct
gtggccgtcagaaggcgatgttatgagtttttggacctgcagctgaaggagtggcataca
aactctctggagaggcatatggctgttttaatggaaactataaagaaaggcatccacgat
gcagatgctgaggtgcggtctgtgacaaggaagtgctactggaacttccatgtccacttc
agtcgggaggcggagcagctgttccagtgcttggagtcgtcctatcaaaaagctctacag
gctcacctgcggagtggtgatacattgatgtcattaccaccatctgatcattcctcatcc
tcctcgcaggagagcctgaatcgaactttgtctccaagaaacaacactggaagaagcgtg
accagatgtaaagcgactcaagcttccagacgcccccccgccacctcaccaggctcctta
cagcgttcttgcagcgacgtggatgtcaacgcagcagccactgcccgcacccgaatgccc
accgtggcttcggcagtgcaagtttcgacttcatcctttagctctgcctctgctctccca
cctggatcttatgcttcgcttggtcgagtccgaacccagaggacgaacacaggaaagcgt
ccatcagtgcctgacagtcgggttcacagcaaaggaaaggtcgtctcacagtctcaaccc
agcagcaggtctggttcccctggccgaatgctcacctccacccatggcaggatggtccgg
atgcctgtgggcaatgctacaactgctgctaacagcagtttgagcaacagtagacgtcca
cgaggccaccgcagccaaggctgtagcagagagaccagccccaccagatcaggctccgca
cgcagccgaatccctcgactcagcatgagtcaggggtgcagccgtgaaaccagtcgcgag
agcagccgtgacaccagccctaccaggggtttcccccccctggaccggttgtctcaccag
gctcagatctcggcctccgtcaatgccatgagaatcctcaatacaggcactgaggtggag
gcggctgttgctgatgctctgctcttaggagacttgaggagtaagcagcgttcagtgcga
cggcactttgagtcatcgggtatgttctctgatgatgacgcaaacagtgatgcctctagc
gcctgctcggaacgctcatatagctcgcgcaatggtggtgtgcgtcacactgaggatgtg
gctgagattctcaaccactgcgccagcgccaactggtcagagagaaaggagggcttgctt
ggattgcagcatgttttgaagagccacagaatactcagtcgtgtggagctgaagagactc
tgtgagatcttcactaggatgtttgctgatcctcacagcaaggtcttcagcatgttcctg
gagacgctggtggacttcattgttttgcaccgggaagacttgcacgactggcttttcatt
ctacttacccagctgctgaagaaaatgggtgctgacctcctgggctctgtccaggccaaa
gttcaaaaggcactagacgtcacttgtgaatccttcccatatgagcagcagttcaacatt
ctgatgcgcttcatcgtggatcagacgcagacacccaacctgaaggtgaaggtggccatc
ctacgctatattgaagcactagcccaccgaatggacccggctgactttgtcaacaccagc
gagacacgcctagctgtttcacggataatcacgtggacaactgaacccaaaagctctgac
gtccggaagcatttttttcactcaccaaactcccagacccttcataactgggaggatttg
tcgggtcgagccagcaccgtgtcctctctgccaggagagggcaacctggaggagaggtgc
aagcaggcagcccaggtggtgctcattgccctgtttgagctcaacaccccagagttcacc
atgctacttggggctctgcccaaaaccttccaagatgggacaaccaagctgttgcacaac
cacctgaagagcaggagtggcatcagcatgacatctcccatgagctcgacaggtcaaaca
gctccgcgccagcccagcagccgcagcagcccgctgacatctcccaccacctgctcccat
ggggggctttctcccagcatgctggagtatgacggtgagaacctgaactctgaggagatc
gacagttctctgcgtagtgtcactgaagcaatccggaacttcagttaccgtagccaagaa
gaggcgatagagccacaaaagcgagatggaacacgggacgctatgtttggagttggggct
cccacccacgctgaccttaggctttatggcgatgtggtggatgccggtcgaacagccctg
gacaataagacttctttactgaacacaccttttccacgctcattcactctgcagcgtttc
agagaatacaacccgcacaactacgatgttatggagctgcggcaacatgcacgccagcaa
gaatgcgttgaaaatgagatccagaaccctagaaacgtcccaggagtgaccgagcaactg
gttgggcagctgctgaaggagctgtcccaggggggcggtgaggagcgccgcgccaccctt
ttggagctgctcaagttggcgcgggaggacagtcaagtggtttgggatgaacacttcaag
gccattctgttgcttctcctggagatgctgagtgataaagattacatgatccgagcgctg
gccttgagagtcttgaaggagatcttgagaaatcaaccatcccgcttcaagaactatgcc
gagctcaccatcatgaagacactggaagctcataaagactcgcagaaggaagtggtgcgt
gctgcagaggaggctgcatccacactggcggtctcaatccacccggagcagtgcatcaag
gtgctttgtcccattgtgcagacggcagactacccaatcaatttggccgcaatcaagatg
cagacaagggccatcgaacgcatcacaaaggagccgctgcatcagctgctgcatgacatc
attccaggcttactgcagggctacgacgacactgaaagcagcgtgagaaaggccagcgtc
ttctgcctcgtagccatctatactgtgattggcgaagaactcaaaccctacctgtctcag
cttaccggcagcaagatgaagctgctcaacctctacattaagagggcccaggcatccacc
agcaatagcagcagctcttccgacatctcttcctactaa
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integrated database retrieval system
