Syngnathoides biaculeatus (alligator pipefish): 133507471
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Entry
133507471 CDS
T09681
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133507471 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133507471 (taf4a)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133507471 (taf4a)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133507471 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
133507471 (taf4a)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
133507471 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
133507471
NCBI-ProteinID:
XP_061688475
LinkDB
All DBs
Position
10:5405315..5432195
Genome browser
AA seq
756 aa
AA seq
DB search
MNCHNSGSAVPPAGTTVASCNTYPVTCVSNSAPVLSKGLPNLTTSSSTVIQTPIPNSLGV
IASTPTVSPASGATVTLVRPPLQTVELGPTLNGNNDGVRAVPPPIKAESPATNIQALSQL
PVSCDAAAPPRLAGPGGVQTLTQQIVSPRLPLTSPGQPSIHNIQLPPGMVLVRCETGQLL
MIPQQALAQMQAQAQGGMAPRTATPNIPPGQAPGNSIINRHTTPSTIIRQGCPTPTSLPS
TTTLRRPPVLQGSVAPAMPRMSQRSQTVGNTVPSITMSKDTMENVNKCRNFLSTLIKLTC
TGKRLTEAASVKQLVKDLLENKLEAEEFTSRLYKELNSSPQPYLVPFLEKNLPALRQLTP
DSAAFIQQSQLAQPSSGSVLSTSQSATTVVLSRTAPRLTTQINRPQLQPNVSKPGLTPSL
VLQPQQQRAMLRPQVPIAVSPVVNLRNQAPGRIVLGQPPVQFKELKPFPVKPEAPAVSRQ
SAAAVSSLAQNNRLKEAGGTFKDDDDINDVASMAGVNLSEESANILATNSGLVGAVTHSC
KDEAFLSCAMLQRRILEIGCRHGVTDFGPEVLNCVSHATQHRLRDLLEKVSLVAQQKNGN
FKEEDNHEVCSDVRSQLKFFEQLDQLEKQRKEEQEREILLKAAKSRARQEDPEQLRLKQK
AKEMQQQELAQMRQREANLTALAAIGPRKKRKIPDSPSSTAVTEGSGPNLSGGAGSSGSR
PTRQRITRVNLRDLLLCLENERFTSSSSFLYKGFLK
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtcacaattcaggaagtgccgtacctccagcgggaacgacagtggcgagttgt
aacacctaccccgtgacttgtgtcagtaactctgcacccgtgttgtccaagggtttgccc
aatttaacgacctcgtcaagcaccgtcatccagacgccgatccccaattcgctcggagta
atcgcctcaactccgactgtgtccccggcatcaggagccaccgtcaccctcgtcaggcct
cctttgcaaaccgtggagttgggtccaactttaaacgggaacaatgatggggtacgggca
gtgcctcccccgatcaaggcagagtcccccgccaccaacatccaggctctatcgcagctc
cctgtcagttgtgacgctgctgctcctcctcgtctcgctggtccaggtggtgtgcaaaca
ctaacgcaacagattgtatcacccaggctccctttgacatccccggggcagcccagtata
cataacatccagcttccaccagggatggtgcttgtacgctgtgagactggacaattgttg
atgattcctcagcaggcgctggcccagatgcaggcacaggcgcaaggaggcatggcaccc
agaactgctacaccaaacatacctccaggccaggctcctggaaacagcataattaataga
catacaactcccagcaccattatcagacagggctgtccaactccaacatcgttgccttcc
accaccactcttcgtagacctcctgtccttcagggttcagtggcgccggccatgccaaga
atgagccagagaagtcaaacagttgggaacacggttccgtcaattacaatgagtaaagac
acaatggagaatgtgaacaaatgtaggaacttcttgtctacactgatcaagctgacttgc
acaggcaagcgattaaccgaggctgccagtgtgaaacagctggttaaagacctactggag
aataaactagaagctgaggaattcaccagcagactatataaagagcttaactcatcgccc
caaccgtacctagtgcctttccttgagaaaaatcttcccgccttgaggcaacttacacca
gactctgcagccttcatccagcagagtcagcttgcccagccatcatctggatcagtcttg
tccacctcacaaagcgccaccacagttgtcctcagcaggactgctcctcgtctcaccact
caaattaacagaccccagcttcagccaaatgttagcaagcctggactgacaccatcactt
gtcctccagcctcagcagcagagagcaatgctgagacctcaggtccccatagccgtgtcc
cctgtggtgaatctcaggaatcaagcccctggtcgcatcgtgctggggcagccaccggtc
cagtttaaagagctgaaaccatttcccgtcaagccggaggcgccagctgtttccaggcaa
agtgcggctgcagtctcgagtctagcccaaaataataggctaaaagaagcaggtggtact
ttcaaagatgacgacgacatcaatgatgtagcctccatggctggagtaaacctatctgag
gaaagtgccaacatcctcgcaaccaattcaggacttgtaggagcagtgacacattcctgt
aaagatgaggcttttctttcctgcgccatgttacagaggagaattctggagattggctgc
aggcatggagtgacagattttggtccagaggtactaaattgtgtctctcatgctactcaa
catcggctccgcgatttgctggaaaaggtttccctcgtggcacagcagaaaaatggcaat
ttcaaggaggaggacaaccatgaagtgtgcagtgatgttcgttctcagcttaagttcttt
gagcaactggatcagttagagaaacagcggaaggaggaacaggaaagagagattctctta
aaggcggctaagtctcgagcccgtcaagaagacccagaacagctacgtctgaaacagaaa
gcgaaagagatgcagcagcaagaactggcacagatgagacagagggaggctaatctgact
gctcttgctgccattggcccgagaaagaagaggaagattccagactctccatcttccact
gctgtaacagagggatcaggccccaatctttcagggggtgctggatcatcaggctccagg
cccacacggcagcggatcacacgtgtcaatctcagggacttgctcttatgtttggagaac
gagcgatttaccagtagctccagtttcctctacaaaggctttcttaaatag
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