Syngnathoides biaculeatus (alligator pipefish): 133507492
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Entry
133507492 CDS
T09681
Name
(RefSeq) rootletin-like isoform X1
KO
K16469
rootletin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sbia03037
]
133507492
Cilium and associated proteins [BR:
sbia03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
133507492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
CCDC39
FKBP15
Motif
Other DBs
NCBI-GeneID:
133507492
NCBI-ProteinID:
XP_061688551
LinkDB
All DBs
Position
10:19755994..19791816
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AA seq
1956 aa
AA seq
DB search
MSSVMSLQEENRVLQGELAKLEDLLAHSRADRDELAIKYSAISERLEQTLRFDSGDERDS
PESRSLAQQNVDLRRRLDEEQAAYKRKLTAYQEGQQRQAQLVQRLQAKVLQYKKRCGDLE
QMLQQKSAEFDKPRLSDSSETSNGRCPAESSSNLEDALIRLEEEQQRSSSLSAVNAMLRE
QLEQTSLANEALGQDIRRLTTDWTKAREELEQKESDWRREEESFHSYFSSEHSRLLTLWR
QVVGFRRHVCDLKSATERDLSEMRNELAQASHSAQVSCTGLSATLHSREGGAALALEREK
ALRLQLEQQLRERVSDMMNLQARTDAERSELNLRLSDSVREGERLKGKIEEKERELVLLS
RRLEEQSSNDGSDMQLMRAHTETLLDTLRDIAQTVLTDADSSSEADQDNSAAPLLAFIHS
SSPAAAPRRSSSPSKLTSPSHPPEATLSALRSAVTHKTLQLQDTRGRLLSAQSSVQQLRK
QLAEADSAKREADQRHQMLQRERDAALRDKETSQREKDRLRQERDTLASEKISLEKTTKA
AQSGSQTLQMDFEKLQLILTSTQREKDRQREEKEAAVQERDRAKAEVQRIQKQWDQSESR
ASAQRGELSAVRETHQQAEVEKQLLEKERAQLSEALTQAESSNAELSLLINKLQSEDAAL
KDSLAKMGNMNEALSQDKIDLNTYILQLEEEKALLQIQKREAEQEKLTIRDELVRMEQDR
MELDSARVTLKQSLQDTELTRVGMEAELQSLRAERLKLQEKVTQLCAEVTSLGSELSLAR
GEGQRNEAALEEAGRGRAELARDKASLLVQLTASERENNALSEELSASRSERESLETALF
EAQHQLAQVESRREQLAADNQNLRVRTDTATAELRRARSEAESALAQSEKEKHAVTHTLN
AAHLEAQQALRKATCEHREEVEKLVTEKEALRQSLTLAHDSALRKQRQQLEEELHKAQRE
KEELQSDLRTLLHDRDQSLLQAENEKQQALSLKEAEKAALCDRVSGLQAELSALTLEAER
RARAAALFKEQEQARVGALTSELQALRSQLDDASALHERDLQSLRETLADSQSRADGAVK
ELDNCRASLAASEEGRDELRRSALEAERRLSQVQDEAETYRREGTELRRSLGEVSKERDT
LSQSNCQLREALRGAETERISVKRQCEEKEQRLAVLQENLLSAQKEVTELRSCLREVERS
RLEARRELQELRRQLKVLDGEKEQKGRELAELQTRLSLEEQREEDRGKEVFGLKHKLSEA
ESARDSLKRELTLVQKQLAESESGWRVCERELTAQLQEARGCEKKLQDEAKHLSLRTQAA
QDSAGAYSLQLSEAQGRLAATEAELTRAEASRRDLEFRLSGLQSALTRTLGIGAGGRGVR
GRSPGGSSASPSPMSRRHSNSPLRSSLSPPKEFHTSTPDNTLGSRAVSPERGGAPLPLSQ
SELDTDSLRSGLKDFLLELREAHRERDDALCQLGTIQREVDELRGDRDLAQIRLAQLQKN
LQEYQEGKRGLDERLTHAQFQLHQQEEAVRRGDRERRTLTDRVKELERVLQACEADKKRT
QDQLDKQRAAEVRLEADRRRLREALEASEARATRVEVGRRSLEGELQRIRLSLGDREAES
QASHDRRDALLKQVAEGEGRVSLLQTEVERLSQSLLKAEENEALLREKNASLNQSLQELA
GAHGSAQSRLTALQKALSMTEQEKQHLQERIDESRSSLSEARRNMAALNERVHGVQSELH
QSQLQRQELEAEFTKTQEQALRQRSASLAEAQRGAQAAQTERAVAEERLRALQRAVAMLE
TEKKDAERQAVRLEKDKNALRNTLDKVERQKLKSEEGSMRLSAERNRLDRSLNTAEQELQ
EAQQQILMLQTQMADMEQSHSACESLLRQRDETQQEAERLRASFRDLERTLGSRERAHRH
RVKGLEEQVSTLKEQLQQEMKRRHPSLPSSFPSTTN
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagtcatgtcactccaggaggagaaccgggtcctgcagggagagctggccaag
ctggaggacctgctggcccacagcagggcggaccgggacgagctggccatcaagtatagc
gccatcagcgagaggttggagcagacgctacgtttcgattcgggggacgaacgtgattcc
ccagagtctcgcagcctggctcagcagaacgtggacctgcgcaggcggctggatgaagaa
caagcggcctacaagaggaaactcacggcgtaccaggaggggcagcagaggcaggcgcag
ctcgtacagaggttgcaggccaaggtgcttcagtacaaaaagaggtgtggagatctggag
cagatgctgcagcagaagtcagcagagtttgacaaacccagactgagtgattccagtgaa
acttcaaatggtcgctgcccagcggaatcgagcagcaacctggaggatgcgttaatccgt
ctggaagaggaacagcagcgaagcagcagtctttccgcggtcaatgccatgctgagggag
cagctggagcagaccagtttggccaatgaggctctcggccaggacatccgccggctcact
actgactggaccaaagcccgagaagagctggaacaaaaggagtctgactggaggagagag
gaagagtctttccatagttactttagcagcgagcacagccgcctgctgactctgtggcgc
caagtggtcgggttccgcaggcacgtctgtgacctgaagagtgccactgaaagagacttg
tcagagatgcgtaacgagctggctcaggcgtcgcactccgctcaggtgtcctgcacgggt
ctgtctgccacgctgcactccagagagggaggagccgccctggccctggagcgcgagaag
gctctcaggctccaactggagcagcaactgagggaacgggtgtccgacatgatgaacctt
caggccaggaccgacgcggagagaagcgagctcaacctcaggttgtcggactcggtgcgt
gagggggaaagactgaagggcaaaattgaggagaaggagagagaactcgtccttctgtcc
aggaggctcgaggagcagagcagcaatgacggcagcgacatgcagctgatgagagctcac
accgagacgctcttggacacactgcgggacatcgctcagactgtgttgacagacgctgac
tcgtcttcggaggcggaccaggacaactctgctgcccctctgctggcctttatccacagc
tcctcccccgccgctgctcctcgcaggtcatcctccccctcgaagctcacctcgccgtcc
caccccccggaggcgaccctttcagcgctacgctcggccgtcacacacaagacactacag
ctgcaggatactcgaggacgtttgctctctgcgcagtcctccgtacagcagttacgaaag
cagctagccgaggccgattcggccaaaagagaagcggatcaacgtcatcaaatgctgcag
cgggagcgagacgctgccctgcgggacaaagagacttcgcagcgagagaaggaccgcctg
agacaggagagagacaccctggccagtgagaaaattagcttggagaagaccacaaaggca
gctcagagcggcagtcagactctgcagatggactttgagaagctgcagctgattctgaca
tccacgcagcgggagaaagaccgccagagggaggagaaggaggctgccgtccaggagagg
gaccgggcaaaggctgaggtccagaggattcagaagcagtgggaccagagcgaaagccga
gcgtctgcccagcgcggcgagctgtctgcagtgagggagactcaccagcaggcggaggtc
gagaagcagttgctggagaaggagagagcccaactttctgaagcgctcactcaggctgag
agcagcaatgcagaactctctctactgatcaataaactccagtctgaggatgcggcgctc
aaggactctttggccaaaatgggcaacatgaatgaggcgctgtcccaagataaaatcgac
cttaacacttacatccttcagctggaggaggagaaggccctgctgcagattcagaaacgc
gaggccgagcaggagaagctgaccatcagagacgagctggtccggatggagcaggaccgg
atggagctggactctgctcgcgtcactctgaagcagtccctgcaggacaccgagctgacc
cgtgtggggatggaggccgagctccagagtctcagggccgagagacttaagctgcaagag
aaagtcacacagctctgcgctgaggtgacctccttgggttctgagctaagcctcgccaga
ggagagggccagcggaacgaagcggccttggaggaggccgggcgcggacgggcggagctg
gccagagacaaagcatctcttttagttcagctcacggcgtccgagagagaaaacaacgcg
ctgtcggaagaactctccgcttccaggtctgagcgtgagtccctggagactgctctgttt
gaggcgcagcatcagcttgctcaggtggagtctcgccgggagcagctcgcagcggacaac
caaaaccttcgagtgcgcacagacacagcaacagctgagctgcggcgcgcacgctccgag
gcagagagcgcactggcccagtctgagaaggagaaacacgctgtgactcacaccctgaat
gcggcacacctggaggcccagcaagctctgcgcaaggccacgtgcgaacatcgggaggaa
gtggagaaacttgtcacggaaaaggaagccctgcgacaaagcctcacgctggctcatgac
agcgctctgaggaagcagaggcagcagttggaagaagagcttcacaaagcgcagcgagag
aaagaggagctgcagagtgatctgaggacgctcctccatgatcgagatcagagtctacta
caggcggaaaatgagaaacaacaggcgctgtcactaaaagaagccgagaaagcggcgctg
tgtgaccgagtgtcgggtctgcaggccgagctgtcggccttgaccctcgaggccgagcgc
agggcccgggcagcggccctcttcaaagagcaggaacaggccagagtcggcgctttaaca
agtgagctgcaggcgcttcggtcgcagctggacgacgcgtctgctcttcacgaaagggat
cttcaaagtctccgggagactctcgccgactctcagtcacgtgctgacggtgccgtcaaa
gagctcgacaattgcagagcttctctcgccgccagcgaggagggtcgagacgagctccgg
cgaagcgccctggaagcggagcgccgtctcagccaagtccaggacgaagcggaaacctac
agaagggaggggacagaactgcggcgcagcctgggcgaggtctccaaggagcgagacacc
ctcagccagtccaactgccagctgcgggaagccctccgaggggccgagaccgagaggatc
agcgtgaagcgacagtgcgaggagaaggagcagaggctggccgtgctgcaggagaatctt
ttgtccgctcagaaggaggtgacggagctgcgcagctgccttagggaagtggagcgttca
cggctggaggcgcgacgggaactgcaggagctgcgcagacagctgaaagtcttggatggg
gagaaggagcagaaaggcagggagctggcagagctgcagacgcgcttgtcactggaagag
cagcgggaggaggacagaggcaaggaggtttttggcctcaagcacaagttatccgaagcc
gaaagtgctcgggactccctgaagagagagctcacactggttcagaagcagctggccgag
tccgagtccggctggcgggtctgcgagagggagctgaccgcgcagctccaggaagcccga
ggctgcgagaagaagctgcaggacgaagccaagcacctgtcgctgcgcacgcaggcggcc
caggactcggccggcgcgtacagcctgcagctgagcgaagcccaaggccggctggccgcc
accgaggcggagctgacgcgggccgaggcctccaggagggacctggaattccgtctgagc
ggcctgcagtcggcgctgacgaggacgctgggcatcggcgccggggggaggggagtcagg
ggcaggagtcccggaggcagctctgcgtcccccagccccatgtcacgccgtcacagcaac
tcgccactacgctcctctctctcgccccctaaagaatttcacaccagcacccctgacaac
acgctgggctccagagccgtttcccccgagaggggaggcgcccctctcccgctttcccag
tcagagctggacacggactctctgcgaagtggtctgaaggacttcctcctggagctccgt
gaagcacacagagaacgcgatgacgccctgtgtcagctggggaccattcagcgggaggtg
gacgagctgaggggggatcgagacttggctcagattcgcctcgctcagctccaaaagaac
ctccaagaataccaagaaggcaagcgaggcctggacgagcgtctgacgcacgcccagttt
cagctccaccaacaggaggaggcggtgaggagaggcgacagagagaggaggacgctcact
gacagggtgaaggagctggagcgcgtcctgcaggcctgtgaggccgacaagaaacgcaca
caggaccagttggataagcagcgagcggcagaggtgcgcctggaggccgacaggaggcgc
ctgcgagaggcgctggaggcgtccgaagcgcgggccacccgggtcgaggtgggacggcgg
agtctggagggggagctgcagaggatccggctgagcctgggggaccgggaggccgagagc
caggcctcccacgatcgccgtgacgctctgctcaaacaggtcgcagaaggagaaggccga
gtttcgctgcttcagacggaagtggagcggctgagtcagtccctgctcaaagccgaggaa
aacgaagctctgctccgggagaagaacgcctccctcaaccagagcctgcaagaactggcg
ggcgctcacggcagcgctcagagccgcttgaccgccctgcagaaggctttgagtatgacc
gagcaggagaaacaacacctccaggagcggatcgacgaatcccggtcgtcgctgagcgaa
gccaggcggaacatggccgccctgaatgagcgcgtgcacggcgtgcagagtgagctgcac
cagagccagctccagcgacaagaactggaggccgagttcaccaaaacccaggagcaggct
ctgcggcagcgctcggccagcctcgccgaagcccagcgcggcgcccaggcggcgcagacg
gagcgggccgtggcggaggagcgcctgcgggctctgcagagggccgtggccatgctggaa
actgagaagaaagacgccgagaggcaggcggtgaggctggagaaggataagaacgccctg
aggaatacgcttgacaaggtggagcgtcagaagctgaagagcgaagagggcagcatgcgt
ctttcggccgagaggaaccgtttggatcgctccctgaacacggccgaacaggagctgcag
gaagcccagcagcagattctcatgctgcagacgcagatggctgacatggagcaatcccac
agcgcgtgcgaaagtttgctcaggcagcgtgacgagacccagcaggaggccgagaggctg
agggccagcttccgggatctggagaggactctggggtccagggagcgcgcgcatcggcac
cgggtcaaaggtctggaggagcaggtgtctaccttgaaggagcaactacaacaggagatg
aaacggcggcacccgtcgcttccctcctcatttccgtcgacgacgaactga
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integrated database retrieval system
