Syngnathoides biaculeatus (alligator pipefish): 133507505
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Entry
133507505 CDS
T09681
Name
(RefSeq) sortilin-like
KO
K12388
sortilin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133507505
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
OB_2TM_halo
Motif
Other DBs
NCBI-GeneID:
133507505
NCBI-ProteinID:
XP_061688581
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Position
10:11428287..11454357
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AA seq
835 aa
AA seq
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MKDTFLDTRSQCLGLMRHRGPADFNMVSAAYIFTWSLFACSLARHFHARQKSFAGRPTRE
LRGDEERGSWEKLEVSERDGAGLNDHSCPSFPGVESAMLNNTHTFNFKVRTMGFLSLAWV
GDESGVILVLTTFQVPLYVMRFGQSNLYRSEDYGKTFTDVTHLINHTFIQTEFGIAVSPD
HSGKVILTGDVSEIRGFRLFRSRNFAQSFVTSELPFEPLIQMLYNPGDSNVLLTLSVKLD
LWISEDFGATWRRIHDRVCLVRWGSKNSIYFTTNYNGSCNDKGMLELRKTTDYGRSFQTI
ATRVYSFVLGGRFVFASIMTGKDTERMIHVSVNGGDLWNIAQLPAVNHEQFYSILAANEN
MIFMHVDDPEDSGIGTIYVSDDRGTVFSKSLERHLYTTTGSDTDFTTITSLRGVYMTSVL
TADGVVETMITFDQGARWQRLRQPQNSHCDTETSTDRPNRCRLHIHATYSTAMKMNVPML
PLSQPSAVGLILAHGSVGDAESAVMPDIYVSNDGGYSWFRSLTGPHHYAILDSGALLVAV
EHTNLPVNQIKFSTDEGRCWRTYNFTSDRFHFSGMDSEPGSRSLNVSLWGYRNDFTKWVV
ITIDFRNLLTRDCNDEDYVPWLAHSVDPDSANDGCVLGYKETFLRLRKDSACWNGRQFNG
RQLLSPCACTLDDYQCDFGYFRPENSSECVEQEDMKGHPLEFCLNGTTEELQTSGYRKIP
GDLCAGGFQPVRKETDLRRRCTSDALHPFSLAESGSLNAAVIAVIVIAMLLMSTVMGVWV
VKKYVCGGRFLVHRYSVMREHAEANKIEGVDDVDAQYMETGIAQYNEDSDQDLLE
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatacatttttggacacgaggagtcagtgtttgggattaatgaggcaccgcgga
ccggccgatttcaacatggtttccgcggcttacattttcacatggagtttgtttgcgtgc
tcgctggcgagacatttccacgcgaggcaaaagtcgtttgcggggaggccgacgagagag
ttgaggggtgatgaggagcgaggcagttgggaaaagttggaggtgtcggaacgcgacggg
gcaggactgaatgaccactcatgcccaagttttcctggagtcgagtcagcgatgttaaac
aacactcacactttcaactttaaagtgaggaccatgggcttcctgtcacttgcttgggta
ggagatgaatctggggtgattctggtgctgaccacgttccaggtgcctttgtatgtgatg
cgatttggccagtcgaacctctacaggagtgaagactacgggaagacattcactgatgtg
acacacctgatcaaccacaccttcatccagacggagtttggcattgctgtcagcccggat
cactctggcaaggtgattctgacaggtgatgtgtctgaaattagaggattccgattattt
cgctcacgaaacttcgcccagtcctttgtgacatcggaactaccctttgagcccttaatt
caaatgctgtacaaccctggagacagcaacgtacttctcactctcagcgtcaagttggat
ttgtggatctcagaggattttggcgccacctggcggaggattcatgacagagtttgcctg
gtcagatggggttcaaagaatagcatttacttcacgacaaactacaacggatcgtgcaat
gacaaaggaatgttggagttaaggaaaacgacagactatggtagaagcttccagacaatc
gcaacaagagtgtactcgtttgtactagggggtcgctttgtttttgcctccattatgacg
ggaaaggacactgagcgcatgatacatgtctctgtgaatggaggagatctatggaacata
gctcagcttcctgcagtcaaccatgagcagttttattccattttggcagccaatgaaaac
atgatattcatgcacgtggatgacccagaagattctgggattggaacaatctatgtgtct
gatgacagaggaactgtgttctccaagtctttggagcgccatctctataccaccacagga
agtgacactgacttcaccaccattacttcactcaggggtgtttacatgaccagcgtactc
acagctgacggagtagtggaaactatgatcacctttgaccaaggagcgcgatggcagaga
ctgcgtcaaccgcaaaacagccattgtgacaccgagacctccacggacaggccgaacaga
tgcagactccacatccacgccacctacagcactgccatgaagatgaatgtccccatgctg
ccactctcccagccgagtgcagtgggccttattcttgctcatggcagcgtgggggatgct
gagtctgctgtcatgcctgacatctacgtgtctaacgatggtggctactcgtggttccgg
tcccttacgggtccccatcattatgctattttagactcaggggctcttctcgtggctgtg
gagcacaccaacttacctgtcaaccaaatcaagttttccactgatgagggacggtgctgg
cgcacttataacttcaccagtgaccgcttccacttcagcggtatggacagtgagccgggg
tctcgctccttgaatgtcagtttgtgggggtacaggaacgacttcaccaaatgggtcgtg
atcaccatcgacttcaggaacctcctcacccgagactgtaacgacgaggactatgtgcca
tggttggctcactctgtcgaccctgacagcgccaatgacggctgtgtgttaggctacaag
gagacctttctacgtttgaggaaagactctgcttgctggaacggaaggcagttcaatggc
aggcagcttctgtctccttgtgcttgtacactggacgattatcaatgtgactttggatac
ttccgacctgagaacagctctgagtgcgtggagcaggaggatatgaagggccatcctcta
gagttctgtctcaatggaaccactgaagagctccagaccagtggttaccggaagattcca
ggagacctgtgtgctggtggattccagccagtcagaaaggagactgacctgaggaggaga
tgcacaagcgatgctcttcatccattttctctggctgaaagcggctcactaaatgctgca
gtcatagcggtgattgtcatagccatgctgctgatgagcactgtcatgggggtctgggtg
gtcaagaaatatgtctgtggtggacggttccttgtgcaccgctactctgtcatgagggaa
cacgctgaagctaacaagatcgaaggcgttgacgatgtcgacgcccagtacatggaaacg
ggcatagcacagtacaacgaggattcagatcaggacctcttggaatag
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