Syngnathoides biaculeatus (alligator pipefish): 133507521
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Entry
133507521 CDS
T09681
Symbol
sema3h
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H isoform X1
KO
K06840
semaphorin 3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_2
V-set
Ig_3
PSI
ig
I-set
SH3_6
PapC_C
Ig_6
Motif
Other DBs
NCBI-GeneID:
133507521
NCBI-ProteinID:
XP_061688615
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All DBs
Position
2:10459177..10517299
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AA seq
762 aa
AA seq
DB search
MSGPAIAVLLIHLGATLTWAWKASQPRLQFTHSELIQNGRLLTLPLEAGDLHSLLPDDDG
MHLYVAMKDNLLSTSMDDITQNPRKLHWPASPDRVQECLMAGKDPETECANFLRVLQPFN
KTHLYVCGTGAFNPRCAFIATSVFQQSGHQTLLYSQTECGKGKCPYDPFQKTASAVVDGE
LYAGITSDFMSRDSAFFRSLGNRHVIRTEQYDSTWLQDAHFVRVAPLSETDNPEDDKVYV
FFTERAQEAEGAAGKVLYSRVARVCKNDIGGQRSLVNKWSTFQKARLVCSVPGPDGLQTH
FDQLQDVFILHGKDKKNPLIYGLFTTSSDILNGSAVCVYRMEDVVRVFKGNFLHKEGPQY
KWAEFTGKVPYPRPGTCPSSTYGSYSSTREYPDDVIFFSRTHPLLEENVLPLGERPLLVR
VGVHYKFSKLLVDRVEAVDSTYDVLFIGTDSGLVLKAIHLPREHGPSQEVTLEQLEVFQD
KSPVTVMTLSKKKQWLFVGSREGVSQLGLYQCELYGEACAECCLARDPYCTWDGHACSPY
MPTVRRRNARHLGEEEDPLTQCVRQGAGLQVEAEQRLMMVAEGNSTYLECLPRSRHAAVT
WYKQAGENSPELNQVLSAEQVVVIERGVLIRRASLSHGGVYHCQVEEHGYHWTAVTVHLA
VWSPSSERLTTTWSASSHQPWYGDTVALVHSRNLGQHCRAIGYRPPRNHRRHSDLVAKAA
KEKERAERHKHGGERGGGGGGGVRVAGRKSRSKPQQRAPRSA
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaccagcaatagcagtgcttctaatccacctcggagccaccttaacatgggcc
tggaaagcatctcagccacgactacagttcacacactctgaactgatccagaatggacgc
ctgctcacgctgcccctggaggccggagacctgcactccctgctgcctgatgacgatggg
atgcatctatatgtggccatgaaagataacctgctgtcgaccagcatggatgacattaca
cagaacccccgcaagttgcattggcctgccagtccagaccgggtccaagaatgtttaatg
gctggaaaggatccagagacggagtgtgctaacttcttacgggttctgcagcctttcaac
aagactcacctgtacgtgtgcggcacaggggccttcaaccccagatgtgctttcatagct
accagcgtcttccaacagtcaggacaccagacgctcttgtacagccagactgaatgcggg
aagggcaaatgtccatatgacccatttcagaaaacagcatcggcagttgtcgatggagaa
ctgtatgctggcattacttcagacttcatgagcagagactctgccttcttccgtagtctt
ggcaaccgccacgtcatccgcaccgagcagtacgactccacctggctgcaagatgcccat
tttgtgcgggtcgcgccgttgtctgaaacagataatccagaagacgataaagtctacgtg
ttcttcaccgagcgagctcaagaggccgagggggccgctggaaaggtgctctactccaga
gtggctcgggtctgcaagaatgacatcgggggccagaggagtttggtcaacaagtggagc
accttccagaaggctcgtttggtgtgctcagtcccgggaccagatggcctgcagacacac
tttgaccaattgcaagacgtcttcatcctccatggcaaagacaaaaagaacccactcatc
tacggcctgttcaccacttcaagcgatatcctcaatggctcggccgtgtgtgtttaccga
atggaggatgtagttcgggtatttaaaggaaactttctgcacaaagaggggccgcagtat
aagtgggcagagtttactggcaaggtgccctacccgcgtcctggaacttgtcccagcagc
acatatggaagctacagctccaccagggaatatcctgatgatgtcatcttcttcagcagg
actcacccactgctggaggaaaatgttctgcccttgggagagcggcccctcctcgtcaga
gtaggagtgcactacaagttcagcaaactgctggtggacagagtagaagctgttgacagc
acctatgatgtcctcttcatcggcacagactctggcctggtgttgaaggccatccattta
cccagagaacacggcccaagtcaggaagtaacgttggagcagctggaggtcttccaggac
aaatcaccagtgactgtgatgacactctccaagaaaaagcagtggttgtttgtgggatcc
agggaaggggtctcccagctgggcttgtaccagtgtgaactatacggagaagcctgtgcc
gagtgctgcctggccagagacccgtactgcacatgggacggccacgcctgcagcccctac
atgcctaccgtgcgaaggaggaatgctcgacacctgggcgaggaagaggatccgttgact
cagtgtgtcagacaaggagccgggctgcaggtggaggccgagcagaggttgatgatggtt
gccgagggcaacagcacctacctagagtgccttccacgttccaggcatgctgctgttaca
tggtacaagcaagccggagagaacagccctgaactaaaccaggtgctgtcggctgagcag
gtggtggtgatcgagcgaggtgtccttatccgtcgggccagtctatctcacggcggcgtc
taccattgccaggtggaggagcacggctaccactggaccgccgtcaccgtccacctggcg
gtctggagcccctcgtccgagcggctgacgacgacctggtccgcatcatcgcatcagccc
tggtacggcgacacggttgcgctggttcactcgaggaacctgggccagcactgccgcgct
atcgggtaccgcccgcctcgtaaccaccgtcgccacagcgacctggtggcgaaggccgcc
aaggagaaagagagggcagagagacacaagcacgggggagaaagaggaggaggagggggt
ggaggagtgagggtggcgggtcggaagagcaggagcaagccgcagcagagagcgccgagg
agtgcttga
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