Syngnathoides biaculeatus (alligator pipefish): 133507559
Help
Entry
133507559 CDS
T09681
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133507559 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133507559 (smarcc2)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133507559 (smarcc2)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133507559 (smarcc2)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133507559 (smarcc2)
PBAF complex
133507559 (smarcc2)
GBAF(ncBAF) complex
133507559 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
133507559
NCBI-ProteinID:
XP_061688720
LinkDB
All DBs
Position
10:13702323..13719260
Genome browser
AA seq
1068 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLTMKSFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSDIEPKLLGKLKDIIKRHQGSVTEDKSSSSHVVVP
IPSSLEEEEWVRPVMKKDKQVLLHWGYFPDSYDTWIPASEIEACVEDAPSPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGHPKRKRISAKTLTDEVTTPDERRDKKAVGAKKRKRSPS
PSPTPPPQESKKKNAKKGPTTPYTKSKRGQREEEQEDINKDLDEASPVPASEDGNAVKTN
STKKDSDSTPVKGGADMDEQEDESMEVTGKDEEEGSPSVKGEPVKGSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTSQTPTPQQMLPFPDKVKDKPADMQNFGLRTDMYSKKMGSSKSKSAANSMRDWTEQ
ETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEESYSSLGPLAYQPV
PFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAAR
VSGRQDPLYGLEGSGIAGTGLEEGERPGRDPDTSNYDTIMKEVKSFMTVSMPSVSDENND
ESKNDSQSNEEKKDAKDFKDGASEEEEKVAENGKKEEERGREAEGERKADKADSEMGDGT
KEKDGKRGEEGHREGESEGEKKAKVERDVGEGNLATAAASALAAAAVKAKHLAAVEERKI
KSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQSFHMEQLKYAEM
RARQQHFQQIQHQQHSQAGGPHASQTPAGSQSSASAHQSASTPAPQPSPGATGPESQPPP
GAHTSPPCPPGQPVTGHSSSSSAPALHESNTPLPAETVHPSASVPPSQ
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacggaagaaagacggcggcccgaatgtcaaatatttcgaagcgtctgataca
gtctctcagtttgataatgtgcgcgtctggctgggaaagaattacaaaaagtacatccaa
gcagagcccccaaccaacaagtctctgtccagtcttgtggtccagctgctccaattccaa
gaggaagtgttcggccgacatgtcagcaaccccccgctcaccaagctgacaatgaaatct
tttctggacttcaaggctggaggcgctctttgccacatcttggcagctgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccatccaggatggaccgaaat
gtcgagatgttcatgacaattgagaagtccttagtgcagaataactgcttgagtcgacca
gtcatctacttaagttctgacattgagccaaaactgctggggaagctgaaagacatcatc
aagagacatcagggctcagtgactgaggacaaaagctccagctcccatgttgttgttccg
attcccagcagtttggaagaagaggagtgggtccgccctgtgatgaagaaggacaagcaa
gtactccttcattggggatattttcctgacagttatgacacctggatcccagctagtgag
attgaagcttgtgtggaagatgcccccagcccagagaagcccaggaaggttcacgcaaag
tggattttggatctggaccagtacaacgagtggatgaatgaggaggactacgaagtcgga
gaaggccaccctaagaggaagaggatatcggccaagactcttacggacgaagtgaccact
cctgacgagcgaagagacaagaaggccgtcggtgccaagaagaggaagcgctcaccgtca
ccatctcctacgccaccaccgcaggaaagcaagaagaagaacgctaagaaagggccaacg
accccgtacactaaatccaaacggggtcagagggaagaggaacaagaggatatcaataag
gacttggatgaagcatcacctgttccagcatctgaagacggaaatgcagtcaaaacaaat
agcaccaagaaagattctgattcgacaccagtcaagggaggcgcagatatggatgaacaa
gaggatgagtccatggaagtaacaggaaaggatgaggaagagggctccccgagtgttaaa
ggggaaccggtcaaaggttcggaccttcacgaggacaacgtgacggagcagacgcatcac
atcatcatcccaagctacgctgcgtggtttgattacaacagtgtccacgctattgagcgt
cgagcccttccagagttcttcaatgggaagaataaatctaaaacccctgagatctacctg
gcgtacaggaacttcatgattgacacttacaggctaaaccctcaggagtacctcacctcc
actgcctgccgcaggaacttggctggagatgtatgcgcaataatgagagtccatgcgttc
ctggagcagtggggactaatcaactaccaggtggactccgagagccggccgacccccatg
ggccccccgcccacttcccacttccatgtcctggcagacactccatccagccttgtgccc
ttacagcccaagacatctcagactcccactccccagcagatgttgcccttcccagataaa
gtgaaggataaaccagcagacatgcagaactttgggttacggactgacatgtacagcaag
aagatgggctcttcgaagagcaagagtgcagcaaactctatgagggattggacagagcaa
gaaacattattactacttgagggattggagatgtacaaggacgattggaacaaggtgtca
gagcacgtcggcagtcgtacacaggacgagtgtattctgcatttccttcgcctacccata
gaagacccctatctggaggaaagctactcctccctgggacctctggcttaccagccggtg
ccgttcagccaagcaggaaaccccgtaatgagtacagtggcgttcctcgcctccgtcgtg
gacccccgtgtggcctctgcagcagctaaatctgctctggaggagttctctcgtatgaaa
gaggaagttcctgcggccctagttgaggctcatgtgcggcgggtggaggaggcggcgagg
gttagtgggcgacaggaccccctatatggcctagagggtagcggcatcgctgggactggc
ctggaagaaggcgagagacccggtagggacccagacacatccaattacgacacaataatg
aaagaagtcaaaagtttcatgacggtctcaatgccttctgtctcagatgaaaacaatgac
gaaagtaagaatgacagccagtccaacgaggagaagaaggacgccaaggactttaaagat
ggcgcaagcgaggaagaagagaaggttgcagagaatgggaagaaagaagaggaaagagga
agagaagccgaaggcgagaggaaggcagacaaagccgactctgaaatgggtgacgggaca
aaggaaaaggatggaaaaaggggtgaggaagggcatagagaaggtgagagtgaaggagaa
aagaaggccaaggtggagcgggatgtgggcgagggcaacctcgccaccgccgctgcgtct
gcgctagctgcagcagctgttaaagctaagcacttggctgcagtggaggagaggaagatt
aaatctctggtggcactcctggtggagactcaaatgaagaaactagagattaaattgcga
cactttgaggaacttgaaaccatcatggatagagagagggaggccctcgagtaccagcga
cagcagcttctggccgaccgccagtcattccacatggagcagctcaagtacgctgagatg
agagctcgccagcagcatttccagcagattcagcatcagcagcacagccaagccgggggt
cctcatgcctcccagacccctgcgggctcccaaagttcggcctcggcccatcaatccgcc
agcacgccggcgccgcaaccgtcccccggcgccacggggccggagtctcaaccccctccg
ggtgcccacacgtcacccccgtgcccgccgggccagcccgtgaccggccactccagctcc
agcagtgctcctgcactccacgaatccaacactcctctaccagccgaaacagtccacccc
tctgcttcagttccaccttcacagtaa
DBGET
integrated database retrieval system
