Syngnathoides biaculeatus (alligator pipefish): 133507635
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Entry
133507635 CDS
T09681
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133507635 (ddx27)
03009 Ribosome biogenesis [BR:
sbia03009
]
133507635 (ddx27)
Enzymes [BR:
sbia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133507635 (ddx27)
Spliceosome [BR:
sbia03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133507635 (ddx27)
Ribosome biogenesis [BR:
sbia03009
]
Eukaryotic type
Pre-60S particles
Helicases
133507635 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
SNF2-rel_dom
Utp25_C
Motif
Other DBs
NCBI-GeneID:
133507635
NCBI-ProteinID:
XP_061688886
LinkDB
All DBs
Position
10:complement(27965613..27973244)
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AA seq
760 aa
AA seq
DB search
MLEQLGLIGTIQDDDQSPEEADTESEQEEEAIVLNRKKKFGSQKAGAGDFNGHFVFGESD
ALDRGDDWATADVMKQLKKKRSLTTLDQKIEKIRKKRKAEEKASAGEASSAGNKRPGEEE
EEMVDVNSRKDEEEDEVDEFNSDDEQILTKADTLREKRQRGGRKRKADEEEEAQSFHEDA
SHFDDELTFDDMNLSRPILKAIAALGFKQPTPIQKACVPVGLLGRDLCACAATGTGKTAA
FMLPVLERLVYKPRTSQVTRVLVLVPTRELGIQVHSVARQLAQFTSITTCLAVGGLDLKS
QEAALRAGPDVLIATPGRLIDHLHNTPSFELAHIEILILDEADRMLDEYFEEQMKEIIRL
CSYNRQTMLFSATMTEEVKDLAAVSLKRPVRIFVNSNTDVAPYLRQEFVRIRANREGDRE
AVVAALLTRTFQDHVMVFTQTRKQAHRLHILLGLVGLKVGELHGELSQNQRLENLRRFKD
EQIDILVATDVAARGLDIDGVKTVINFTMPSTPKHYVHRVGRTARAGRSGRSVSLVGESE
RKTLKEVVKSAKNAVKARVLPPDVVLKFRDLISKLEKDVEAVLRLEREEREMAASEAKLS
VAQKRLNGSASEETQRVWFQTQQERKRSRVNKALQDFDLALRGKKKRDKFVKDGKKKKDM
TAEERAHFEILKAQMFAERAAKRERRPKRARAMPEDEPPPKANQKAGKGGKSGRKSAFDS
ELTDVSGKALKRFRAGPSFKDRKRLGQDRKRSGGSRLKRK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacaacttggcctcatcggaaccatccaggatgatgaccagagtccggaagaa
gctgacaccgagtccgaacaggaggaggaagccatcgtcctcaaccgcaagaagaagttc
ggcagccagaaggccggcgccggggacttcaacggccactttgtgttcggggaaagcgac
gcgctggaccgcggggacgactgggccacggccgacgtcatgaagcagctcaagaagaag
agaagtctcaccactctggaccagaaaatcgagaaaatccgtaagaagaggaaagcggag
gagaaagcgtccgcgggcgaagccagttcggcagggaacaaacgacccggcgaggaggag
gaggagatggtggacgtcaactctcgtaaagatgaggaagaggatgaagtggacgagttt
aattctgacgacgagcagattctcaccaaagcagacacgctgcgggaaaagcgacaacgc
ggcgggaggaagaggaaggcggacgaggaggaagaggcgcagtcgttccacgaagacgcg
tcgcactttgacgacgagctcacctttgacgacatgaacctgtccagacccatcctgaag
gcgatcgcggcgttgggcttcaagcagcccacccccatccagaaggcctgcgttcccgtg
gggctcctgggccgagacctctgcgcctgcgccgccaccggcacaggaaagacggccgcc
ttcatgttgcccgtgttggagcgcttggtttacaagcccagaacatcccaggtgacccgg
gtgctggttctggtccccacccgagagctcggcatccaagttcactcggtggcgcggcag
ctggcccagttcacctccatcaccacgtgcctggctgtcggcggcctggacctgaagtct
caggaggcggcgctgagggcgggcccggacgtcctcatcgccaccccgggccgactcatc
gaccacctccacaacacgcccagcttcgaactcgctcacattgagatcctcatcctggac
gaagcggacaggatgctggacgagtactttgaggaacagatgaaggaaatcatccggctg
tgttcctacaaccggcaaaccatgttgttctcggccaccatgacggaagaggtgaaggac
ctggcggccgtctcgctcaagcggcccgtccggatcttcgtgaacagcaacacggacgtt
gccccgtacctgcggcaggagttcgtgcgcatccgcgccaaccgcgagggcgaccgtgag
gcggtggtggcggcccttctcaccagaaccttccaggaccacgtgatggtcttcacgcag
accaggaagcaagcgcacagactgcacatcctgctgggtctcgtggggctcaaggtcggg
gagctgcacggggaactcagtcagaaccagagactggagaacctcaggcgttttaaggac
gagcagatcgacatcctggtggcgacggacgtcgcggccagaggcctggacatcgacggc
gtcaaaacggtgatcaacttcaccatgccgtccacgcccaagcactacgtccaccgcgtg
ggccgcacggccagagcgggccgctcgggtcgctcggtgtcgctggtgggcgagtcggag
aggaagacgctgaaggaagtggtcaagtctgccaagaacgccgtgaaggctcgcgtgctt
cctccagatgtcgtcctcaagttcagagacctcatttccaaactggaaaaagacgtggag
gccgtgctgaggctggagagggaagagagagagatggcggcctccgaggccaagttgagc
gtggcccagaagcgcctgaacggctccgcctctgaggaaacgcaaagagtttggttccag
acgcagcaggagcggaagcggagtcgcgtgaacaaggccctgcaggacttcgacttggct
ctgcgagggaagaagaagcgagacaagtttgtgaaggacggcaagaagaagaaagacatg
acggcggaggagcgcgctcacttcgagatcctgaaggctcagatgttcgccgagcgagcc
gccaagcgcgagcggcgacccaagagagcccgggccatgcccgaggacgagccccccccg
aaagccaatcagaaggcaggaaaaggaggcaaatcgggccgcaagtctgccttcgacagc
gagttgaccgacgtcagcggcaaagccctcaaacgcttcagggcgggcccatccttcaaa
gacaggaaacgcctcggccaggacaggaagcgctcgggaggctccaggttgaagaggaag
tga
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