Syngnathoides biaculeatus (alligator pipefish): 133507809
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Entry
133507809 CDS
T09681
Symbol
rbck1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04217
Necroptosis
sbia04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
133507809 (rbck1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133507809 (rbck1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133507809 (rbck1)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
133507809 (rbck1)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
133507809 (rbck1)
Multi subunit type E3
LUBAC complex
133507809 (rbck1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
ubiquitin
zf-RING_UBOX
zf-RING_2
zf-RING_5
IBR_1
Motif
Other DBs
NCBI-GeneID:
133507809
NCBI-ProteinID:
XP_061689253
LinkDB
All DBs
Position
10:21811099..21823079
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AA seq
610 aa
AA seq
DB search
MSHLKRDLGDDPGHAGETMFLGCLGNHAGSLRKSGWGKGTEELTKCLTEALSVGDEEEAV
ALTRKLCRLSLPVCVSVRSQAYPQESIRLVVGVEDAKSDAATSVSVMVSCGMTVSQLKDK
INKIYGFHPTLQRWVIGKRLARDHDTLYSHGIRSDGDWAFLFIVSAHAAHFTSRQQRLNE
EQRPLQGIAEETIKVIPRANDGKKSPSASLPTQFPPHPGPPPSAPPPPPQAEPLPAQPGW
VCPSCTFINEPTCRGCRMCSAEKPEDYRVPEAHKPPPPPPPRPLLHPPPPPRVEPLPPQL
GWMCPTCTFVNEPTRPGCRMCSAERPEDYRVPEAHQPVGEEAERLEKEMMAVFFFEEVEN
LKRLINYSELRKTDDLNIVPNTSESTCPICFCDLEQGMGIVLRECLHAFCRECLRGTIMN
CEDAEVSCPEQCDMKLVDREIKALLTEQEYERFLEQRLSVAESRLQCTFHCRTADCRGWC
IYEDEVNEFHCELCGRMNCIICRAIHDNMNCQEYQEDLRIRAQNDNAAQQTQNLLKLLLQ
SGKAMNCPQCDIIIQKRDGCDWVCCSVCRMEICWVTKQARWGPNGRGDTSGGCKCRVNNK
PCHPNCLNCH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacctgaaaagagacctcggggacgacccaggacacgctggagagactatgttt
ctcggctgtcttgggaaccacgcgggatccctccgaaagagtggctggggaaagggaacg
gaggagctgacgaaatgtctgaccgaagctctgagcgtcggggatgaagaagaggcggtc
gcgctgacccggaagctgtgccgactctctctgccggtgtgcgtaagcgttcgaagccag
gcctaccctcaggaatccatcaggttggtggtgggtgtggaagacgcgaagtccgacgcc
gccacgtcggtgagcgtaatggtttcgtgcggaatgaccgtctcccaactcaaagacaag
atcaacaagatatatggcttccacccgacgctgcagcgctgggtgatcgggaagcggttg
gcacgtgaccacgacacgctgtacagtcatggcattcgcagcgatggcgactgggctttc
ctgtttatcgtgtctgcacacgccgctcatttcacgagccggcagcagcgtctgaacgaa
gagcagcgtccccttcagggcatcgcggaagagacgattaaagtgattcccagagcgaat
gatgggaagaaatctccttcagcgtcattgccaacccagtttcctcctcatcctggtcct
cctccttctgctcctccccctcctcctcaagcggaacctctcccggctcagccgggctgg
gtgtgtccaagttgtacattcatcaacgagccaacttgtcgcggatgccggatgtgcagc
gcggagaagccagaggattaccgcgtccccgaagctcacaaacctcctcctcctcctcct
cctcgtccccttcttcatcctccccctcctcctcgagttgaacctctcccgcctcagctg
ggctggatgtgtccgacttgtacgttcgtcaacgagccaactcgtcccgggtgccggatg
tgcagcgcggagaggccagaggattaccgcgtccccgaagctcaccagccggtcggagag
gaagctgagcggcttgagaaggagatgatggcagtattttttttcgaggaggttgagaat
ctgaaacgactgataaactactcggaattgcgaaagaccgacgatctgaacatcgttccc
aatacctcagagtctacctgtcccatctgcttctgtgatctggagcaaggcatgggcata
gtgctcagggagtgcctgcacgctttctgcagggaatgtttgcgagggaccatcatgaac
tgtgaggatgctgaggtgtcctgtcccgagcagtgcgatatgaagctcgtcgacagagag
atcaaagcgctgctcacggaacaggagtacgagcgttttctggaacaacgtctgagcgtc
gccgaaagccgcctgcagtgcaccttccactgtcgcacggccgactgtcgaggctggtgc
atctatgaggacgaagtcaacgaattccactgcgagctctgcggccggatgaactgcatt
atctgcagggccattcacgataacatgaattgtcaggagtatcaagaggacctccgcatc
cgggcacaaaacgacaacgcggcgcagcagacccaaaatcttctgaagctcttgctccag
agcggcaaggccatgaattgtccgcagtgtgacataatcatccagaagagagacggctgc
gactgggtctgctgctctgtgtgccggatggaaatctgctgggtgaccaaacaagctcgc
tggggacccaacggaagaggagacacatccggaggctgtaaatgccgagtgaataataag
ccgtgccatcccaactgcctcaactgccactga
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