Syngnathoides biaculeatus (alligator pipefish): 133507886
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Entry
133507886 CDS
T09681
Symbol
cdh4
Name
(RefSeq) cadherin-4
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133507886 (cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133507886 (cdh4)
Cell adhesion molecules [BR:
sbia04515
]
Cadherins
Major cadherins
133507886 (cdh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
DUF5527
Motif
Other DBs
NCBI-GeneID:
133507886
NCBI-ProteinID:
XP_061689413
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All DBs
Position
10:complement(5444583..5666455)
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AA seq
921 aa
AA seq
DB search
MNIGSVILACTLFAAASSGGSKMGLSAKPPCRSGFSQNFYIVIVPKVVLHSQNLLKVKFE
DCQHSREVGFVSSDPNFSVRPDGAVYAEQEFGNISEPIQFMVTARELFDPHIWETTVKLA
PAGHPHPLPLTKADIEEMLSRVLDSQPRVIKFPRKHQRSSYGNGLRRQKRDWVIPPINVP
ENSRGPFPHMLVRIRSDQDKDVGIRYSITGAGADQPPSGIYNIDPISGNMFVTQPLDREE
RASFHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFKNQVYNGSVAEGSKPGSSVMQV
TASDSDDSTTANGMVRYRILSQTPHSPIPNMFTINSETGDIVTVAAGLDREKVSQYTIIV
QATDMEGNLNFGLSNTATALISITDINDNPPELTVRTFSGEVPENKLNVVVANLTVVDRD
QPHSPNWNAVYRIVSGDPSGHFTIRTNPITNEGMLTVIKPVDFEMNRAFMLTVVVSNQAH
LASGIQSSLQSTAGVTISVQDVNEPPVFSVNPKMIRFEEGVPAGTTLTVFSAQDPDHFVH
QIVRYSKLSDPANWLRINRTNGQITTMALLDRESMYVKNNVYEATFLAFDNGKSGSPQAS
GTGTLQIYLIDVNDNAPVLIPKEAQVCQRARLSSRINITASDADSDPNVGPFGFELLSHP
PSLRYNWTISRLSGDHAQLRLKIPYLEAGVYEIPITVSDSGNPQRSNRSLIRIKVCPCDE
NGDCSATGAVAAAGLGTGAIIAILICIIVLLSMVLLFVVWMKRRENEKQAKPLLIDPEDD
VRDNILKYDEEGGGEEDQDYDLSQLQQPETLDHIINKPAGVRRVDERPIIPESQYPVRPS
LPHPGDIGDFIHDGLRAADNDPTAPPYDSLLVFDYEGNGSTAGSVSSLNSTSSGDQDYDY
LNDWGPRFKKLADLYGGGDDD
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaacataggcagcgtcatcctggcgtgcaccttgttcgccgccgcatcctcggggggg
agtaagatgggcctgtccgcaaagcctccatgcaggtcaggcttctcccagaacttctac
atagtgatagttcccaaggttgtgctacatagccagaaccttctgaaagtgaagtttgaa
gactgccagcacagcagagaggtgggctttgttagtagcgaccccaacttcagtgtgagg
cctgatggcgccgtgtatgctgagcaggaatttggaaacatttcggaacccattcaattc
atggttactgcccgagagctcttcgacccacacatctgggagaccactgttaagctcgca
ccagctggacatccccaccctttacccctgacaaaggctgacattgaagaaatgctatca
agagtgttggactcccaaccccgagtcatcaagtttccccgaaaacatcagagaagttcc
tatggtaacgggctgaggcgacagaagagagactgggtcatcccgcccattaatgtaccc
gagaactcccgaggcccctttcctcatatgcttgtcagaattcgctcagaccaggacaaa
gatgttgggatccgctacagcatcactggggcaggtgctgatcagccccctagtggcata
tacaacatagaccccatcagtggcaacatgtttgtcacccaacccctggacagagaggag
agagcctccttccatctgcgcgcccatgcagtggacatgaatggcaatcaggtggagaac
ccaattgatttgtacatctatgtgattgacatgaatgacaacagacctgagtttaagaat
caggtgtacaatggctcagtggctgaaggatccaagccagggtcatctgtgatgcaagtg
acagccagtgactcggatgactctaccacagctaatggcatggttcggtaccgcattctc
tcgcagaccccccacagccccatccccaacatgttcactatcaacagcgagactggagac
attgttacagttgcagccggtctggacagagagaaagtctcccagtacaccatcattgtc
caggccaccgacatggagggaaacttaaactttggattgtctaacacagccacagccctc
atctccattaccgacatcaatgacaatcccccagaactgactgtcaggacgttttccgga
gaggtgccagagaacaagttgaatgtggtcgtggccaacttgacggtggtggacagggat
cagcctcacagtcccaactggaacgctgtctaccggattgttagcggagacccctctgga
catttcaccatccggacaaaccccatcactaatgagggaatgctgactgtcataaagcca
gtggacttcgagatgaaccgggccttcatgctgactgtggtggtatccaaccaggcccac
ttggccagtggcattcagtcatcacttcagtccacagctggagtcaccatctcagttcag
gatgtgaatgagcctcctgtcttttccgttaaccccaaaatgattcgcttcgaggagggt
gttccagcagggacaacccttacggtgttttctgctcaggacccggaccactttgtccat
cagattgtcaggtactcaaagttgtcagatcctgctaactggctgagaatcaacaggacc
aatggtcagatcactacaatggccctacttgacagagagtccatgtacgtcaaaaacaac
gtatatgaggccacatttctggccttcgacaatggtaagtctggttcacctcaagccagt
ggtacaggaactctccagatctacttgatcgatgtgaatgacaacgccccagtgctgata
cccaaggaagcccaagtgtgtcaacgggcacgcctcagttctaggattaatattacagct
tcagacgcagactctgaccccaatgtggggccatttggttttgagctactctcccatcct
cccagtttgcgctacaattggaccatttccagactcagcggtgaccatgctcagctgagg
ttaaagattccttacttggaagctggggtgtacgagattcccatcactgtgtctgattct
gggaacccgcaacggtctaaccgctccttgatcagaatcaaagtgtgcccttgtgatgag
aatggggactgcagcgccacaggggctgtagcagctgctggcctcggcactggggccatc
atcgccatactcatctgtataattgtattactcagcatggttctcctgtttgtggtgtgg
atgaagcgcagagagaatgagaagcaggcaaagccacttctgatcgaccccgaagacgat
gtcagagacaatatcctcaaatatgatgaggaagggggaggagaggaggatcaggactat
gacctgagccagctccagcagccagagactttggaccatatcatcaataaaccagcaggg
gtacgccgagtggatgagaggcctattatccctgagtcgcagtatcccgtcagacccagt
ctgccccaccctggagacataggagatttcattcatgatggccttcgggcagcagacaat
gaccccacagctcctccctatgattccctgctggtgttcgactacgaaggcaatggttcg
accgccggatcagtcagctcgctcaactccaccagctcaggggaccaggactatgactac
ctcaacgactggggccctcgcttcaagaagctggctgacctctatgggggaggggacgac
gactga
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