Syngnathoides biaculeatus (alligator pipefish): 133508001
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Entry
133508001 CDS
T09681
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133508001 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133508001 (rae1)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133508001 (rae1)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133508001 (rae1)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133508001 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
Exonuc_X-T_C
Motif
Other DBs
NCBI-GeneID:
133508001
NCBI-ProteinID:
XP_061689638
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All DBs
Position
10:complement(5341679..5347923)
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AA seq
369 aa
AA seq
DB search
MSLFGTNSGFGTTGTGVFGSSTADTHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDTCWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHDGPIKSIHWIKAPNYSCVMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRLESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYISPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatttggcacaaactccggatttggaacaactggaactggtgtttttggaagc
tcaacggctgacacacataatcctatgaaggatgttgaagtgacctccccacctgatgac
agcattagctgtctggctttcagcccccccaccatgcctggtaattttctcattggagga
tcctgggctaatgacgtccgatgctgggaggtacaggacaatggacaaacagtccccaaa
gctcaacagatgcacacaggtcctgtgcttgatacatgctggagtgatgatgggagtaaa
gtgttcactgcttcctgtgacaaaacagccaaaatgtgggatctcaatagcaaccaagca
atgcagattgcacagcatgatggcccaatcaagtcgattcactggataaaagcaccaaac
tatagctgtgtcatgactggcagctgggacaaaaccctgaagttttgggacacccgctca
cccaatcctatgatgtctctgcagatgccagaaagatgttactgtgcagatgttgtttac
cccatggcggtggtggccacagccgagcggggcctgattgtttaccagttggagaaccag
ccgtcggagtttcgcagacttgagtctcctcttaagcatcagcaccgctgtgtggccata
ttcaaggacaagcagaacaagccaactggctttgcactgggaagcattgaaggacgtgtt
gctatccactacataagccctccaaacccagccaaagacaacttcaccttcaagtgccac
aggtcaaatggaaccaacacagccaccccacaagacatctacgctgtcaatgcaatctcc
ttccatcccgttcacggaactttggcgacggtcggctcagatggtcgctttagtttttgg
gacaaagacgcccgcaccaagttgaagacgtctgagcagctcgaccagcccataacagcc
tgctgctttaaccacaatggcaacatctttgcgtatgcttccagctatgactggtcaaag
ggccatgagtactacaacccccagaagaagaactacatttttttgaggaatgctgctgag
gagctgaagcctcggaacaagaaatggtga
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integrated database retrieval system
