Syngnathoides biaculeatus (alligator pipefish): 133508038
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Entry
133508038 CDS
T09681
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03013
Nucleocytoplasmic transport
sbia03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133508038 (ddx19b)
03015 mRNA surveillance pathway
133508038 (ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133508038 (ddx19b)
Enzymes [BR:
sbia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133508038 (ddx19b)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133508038 (ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
133508038
NCBI-ProteinID:
XP_061689722
LinkDB
All DBs
Position
10:complement(10865161..10879098)
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AA seq
489 aa
AA seq
DB search
MSSDSWAQAVDEQEAAAESIGNLQIKETLGENGTSQLSADSNAAKSEVGVKTVGDKKTDD
DERDDKAAQSLLNKLIRSNLVNTTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYGM
GFNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVNPDNKYPQCLCLSP
TYELALQTGKVIEQMGKHYPEVKLVYAIRGKRLQRGAKLQEQIVIGTPGTMLDWCSKLKF
IDPEKIRVFVLDEADVMIATQGHKDQSIRIQRMLPKNCQMLLFSATFEETVWDFAKRIVP
DPNIIKLKREEETLDTIKQYYVLCNSKEEKFEALCNIYGAITIAQAMIFCHTRKTAGWLA
GELSKENHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDL
PVDQDGNPDNETYLHRIGRTGRFGKRGLAINMVDSRMSMNILNRIQDHFNKKIEKLDTHD
LDEIEKIAS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagactcctgggcccaggcagtggacgagcaagaggctgcggcagaatcaatt
ggtaaccttcaaataaaagagacgcttggagaaaatggaacatctcaactgtcagcagac
agtaatgcagccaagtcagaagtgggagttaagactgttggggataaaaaaacggatgat
gatgaaagagatgacaaagcggcccagtcattattgaataagctcatcagaagtaatctt
gtcaacaccacaaatcaggttgaagtacttcaaaaggatcccaactctccactctactct
gttaaatcatttgaggagttgcgactaaaaccacagctccttcagggtgtttatggcatg
ggttttaacaggccatccaaaatacaggaaacagccttacccatgatgcttgctgaacct
ccacagaatctgattgcccagtctcagtcaggaacaggaaaaacagctgcctttgtcctc
gccatgctcagtcatgtcaatcccgacaacaagtatcctcagtgcctgtgtttgtcaccc
acctatgaactggcacttcagactggtaaagtgattgagcagatgggtaaacactatcct
gaagtcaaattagtttatgccatccgaggaaaaaggctgcagcgaggcgcgaaacttcag
gaacagatagtcattggcacacctggcaccatgctagactggtgcagcaagttgaagttc
atcgatcctgagaagattcgggtgttcgtgcttgatgaggctgatgtcatgattgcaacg
cagggtcacaaagaccaaagtatccgcatccagaggatgctgcccaaaaactgccagatg
ttgctgttttcagccacatttgaggagactgtttgggatttcgccaagcgcatcgtccct
gatccaaacatcatcaaattaaaacgagaggaggaaactctggatacaatcaaacagtac
tatgtattgtgtaacagcaaagaggagaagtttgaagcgttgtgcaacatctatggagcc
atcaccattgcccaggccatgattttctgtcatacaaggaagactgcaggctggctggca
ggggagctttccaaagaaaaccaccaggtggcgctcctcagcggagagatgcaagtggag
cagagagcagcagtcattgaacgcttcagagatggaaaggagaaggtccttgtcaccaca
aatgtctgtgccagaggaattgatgtggagcaggtatcggtggtgatcaatttcgaccta
ccagtagaccaagatggtaacccagacaacgagacgtacctgcacaggattggccgtacg
ggtcgattcggcaaaagggggctggccatcaacatggtggatagcaggatgagtatgaac
atcctcaacaggatccaggatcattttaataaaaaaattgaaaaactagatacacacgat
ctggatgaaatagagaaaattgcaagctaa
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integrated database retrieval system
