Syngnathoides biaculeatus (alligator pipefish): 133508103
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Entry
133508103 CDS
T09681
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133508103
Spliceosome [BR:
sbia03041
]
Common components
Common spliceosomal components
General mRNP proteins
133508103
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
133508103
NCBI-ProteinID:
XP_061689833
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Position
10:complement(28033089..28042971)
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AA seq
520 aa
AA seq
DB search
MSNMADDLDIEAMLEAPYRKDDKTASPDGGDEQAKSRKKRSRSRERKRSKSREKKRSRSR
ERKRSREKRRSRSRERRRSRERGGRYRDYHKARKRSRSRSPIRREKSPIRREKSPIRREK
SPNKSVLTRMPVDNLTPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRNS
RRSKGIAYIEFVEASSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAAANNLQKGSS
GPMRLYIGSLHFNITEEMLRGIFEPFGRIEGIQLMMDSETGRSKGYGFITFADAECAKKA
LEQLNGFELAGRPMKVGHVTERSDGSAAASLLDSDELERTGIDLGTTGRLQLMARLAEGT
GLQIPPAAQQALQMSGAIAIGAMAAVSAAMNPSMNLNMNPPALNLPSQPLATHCFQLSNM
FNPSSEEHPGWEVDIQHDVIEECNKHGGVVHIYVDKNSTEGNVYVKCPSIPAAMAAVGAL
HGRYFAGKMIKAAYVPLPAYHNLFPDAATATQLLVPPPRR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacatggcggacgacctggacatcgaggccatgctggaggctccttacaggaag
gacgacaagacggccagccccgatggcggggacgaacaggccaagagcaggaagaagcgg
agccgcagccgcgagaggaagcgcagcaagagtcgggagaaaaagcggagtcgcagccgc
gaacgcaaacgcagccgggagaagcggcgcagtcgcagccgagagcggcggcgcagtcgc
gaaagaggaggccgctacagggactaccacaaggcgcggaagcggtcgaggagcaggagt
cccatccggagagagaagagtcccatccggagagagaagagtcccatccgacgggagaag
agtcccaacaagtcagtcttgaccaggatgccggtggacaatttgacccccgaggagcgg
gacgccaggaccgttttctgcatgcagctggctgcccgcattcgccctcgagatctggag
gacttcttctctgccgtgggaaaggtccgagacgtgaggatgatctcggacaggaactcg
cgccgctcgaagggcatcgcttacatcgagtttgtggaggccagctcggttcctctcgct
atcgggctgacggggcaaaggctgctgggagttcccatcatcgtgcaggcctcgcaggcc
gagaagaaccgagcggcggcggccgccgccgccgccaacaaccttcagaaaggttcgtcg
ggacccatgaggctctacatcgggtcgctgcacttcaacatcaccgaggagatgctgagg
ggaatctttgagcccttcggaaggatcgaaggcatccagctgatgatggacagcgagacg
ggccggtccaaagggtacggcttcatcacgtttgcggacgccgagtgcgccaagaaagcc
ctggagcagctcaacggctttgagctggcgggtcggcccatgaaggtgggtcacgtgacc
gagcgcagcgacggctcggccgccgcctccctgctggacagcgacgagctggaacgcacc
ggcatcgacctcgggaccaccgggcggctgcagctcatggctcgtctcgccgaggggacg
ggcctgcagatccctcccgccgcccagcaagctctgcagatgagcggcgccatcgccatc
ggcgccatggccgccgtctccgccgccatgaatccatccatgaacctcaacatgaacccg
ccggccctgaaccttccgtcgcagccgctggccacgcactgcttccaactctccaacatg
ttcaaccccagcagcgaggagcatcccggctgggaggtggacatccagcacgatgttatc
gaggagtgcaacaaacatggcggcgtggttcacatctacgtggacaagaactcaacggag
ggcaacgtgtacgtgaagtgtccgtccatccccgccgccatggcggccgtcggcgctctt
cacggacgctactttgcaggcaagatgatcaaggcggcgtacgtgccgctccccgcctac
cacaacttgttcccggacgccgccaccgccacgcagttgctggtcccgcccccgcgccga
tga
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