KEGG   Syngnathoides biaculeatus (alligator pipefish): 133508114
Entry
133508114         CDS       T09681                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    133508114 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbia03019]
    133508114 (wdr82)
   03036 Chromosome and associated proteins [BR:sbia03036]
    133508114 (wdr82)
Messenger RNA biogenesis [BR:sbia03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     133508114 (wdr82)
Chromosome and associated proteins [BR:sbia03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     133508114 (wdr82)
    COMPASS/SET1 complex (yeast)
     133508114 (wdr82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_IFT122_1st NBCH_WD40 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_SCAP WD_LRWD1 Beta-prop_NWD2_C Beta-prop_HPS5 VPS8_N Beta-prop_DCAF4 MinC_C
Other DBs
NCBI-GeneID: 133508114
NCBI-ProteinID: XP_061689854
LinkDB
Position
10:complement(24638370..24644486)
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGESIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFSAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGGALRILDAFKGAVLHSFGGYNNNKG
VTLEASFTPDSQFVVIGSEDGKIHVWNAESGMKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctgacggacaatgtgctgcggagcttcagggtggcgaaggttttccgggagaac
tcggacaagattaactgcttcgacttcagctccaacggagagtccatcatatcgagcagc
gacgacgactcgctggtgttgtacgactgccaagaggggaaaccgaagaggaccctttac
agtaaaaagtatggagtggatttgatcaggtacacacatgcagccaacacggtcgtctac
agttccaacaaaattgatgataccatcagatacttgtcccttcatgacaataaatacatc
cgctacttccctgggcacagtaaaagagttacctccctctccatgtctcctgtggacgat
accttcatttctggatccctggataaaaccataaggctgtgggatctgcgctcacctaac
tgccagggcctcatgcacctccagggcaagccggtgtgctcgtttgatcccgagggtctc
attttctccgctggcatcaactcagaaatggtgaagctttacgaccttcgctcattcgac
aagggaccgttcgcgaccttcaagctgcagtacgacaggacgtgcgagtggacgggcctc
aagttcagcaacgacggcaaactcatcctcctgtccaccaacggcggcgcgctccgcatc
ttggacgcattcaaaggggccgtactgcactccttcgggggatacaacaacaacaaaggt
gtcacactggaggcctcgttcacacccgactctcagttcgtcgtcatcggttccgaggac
ggcaaaattcacgtgtggaacgcggagagcggcatgaaggtggccgtgctggacggcaag
cacacggggcccatcacgtgcctccagttcaaccccaaattcatgacgttcgccagcgcc
tgctccaacatggcgttctggctgcccaccatcgatgactga

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