Syngnathoides biaculeatus (alligator pipefish): 133508274
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Entry
133508274 CDS
T09681
Symbol
casz1
Name
(RefSeq) zinc finger protein castor homolog 1 isoform X1
KO
K25209
zinc finger protein castor
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133508274 (casz1)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133508274 (casz1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
Phage_YorO
Motif
Other DBs
NCBI-GeneID:
133508274
NCBI-ProteinID:
XP_061690033
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All DBs
Position
2:12339644..12571867
Genome browser
AA seq
2043 aa
AA seq
DB search
MDHVVMCVLVVGRSWSPRRKPMHAQGRTSKLHTAERSLCTESTSGKPKMAAKRKGGLKLN
AICAKLSRQVVFDSNSQNAEGDQSVAENSERGSSHYDDNETNFRESLSLSQSLEEDQKRR
EAIEKWVNGEYGDEPLTAEGGDEQEHELQDADDENAPPEGVYMVQPKGCSDEEDNNGEEA
EPVVGSQDGSYHDDKDAEDGPPKPDAYMPTSEAPSRQAPFSSPGEASALRDYAANTMNEF
LGMFGYDDHHMRDELNKKLSFEKLKAATSDSSSLSSEEASRRARFSKYEEYIRKLKAGET
LPWPIHASPPKPDDLNSKLSQDKSPTMLQTSGGIPAAEAQIYPTSSDHKQQGGAPLAGAQ
PSNPSHLQNMASRASKYDFYIQKLKMGESIQPNGNAFKRPSKYDLENVKFLNLFKPGDGN
PDMGGAIAFKTGKGGRPSKYDIRTIQKLVPGNPEASLMPNILATAPGNPGAPGVPTIGAA
GSSIAPGLTVDQTGHLNFTTSDYLKSTFSKTDSITTGTVSSVKNGLPPDKPASDDVNLYQ
KYIARFSGSQHCGHVHCAYQYREHYHCMDPECNYQVSRFTSKQDVIRHYNMHKKRDNSLQ
HGFMRFSPLDDCSVYYHGCHLNGKSTHYHCMQVGCSKVYTSTSDVMTHENFHKKNAQLIN
DGFQRFRATEDCGTVGCQFYGQKTTHFHCRRPGCTFTFKNKCDIEKHKSYHIKDDAYAKD
GFKKFYKYEECKYEGCVYSKATNHFHCIRSGCGFTFTSTSQMTSHKRKHERRHIRSSGVM
GLSSTFLAPKDEPEESSNDDLMDFSAISSKNSSLSASPTTQQSSTVSHLMATPTTAVSSS
SSVGLTLKPTTSLPSVGQRMASLLSQALPSNMPVALSLSNSTMAASSPFYPLLPRLPLQP
PPHAAGLLSAVSSGAHSMPTDSLTQGCSTPGADGAMASTPSSFSGSSIMEKISASKGLIS
PMMARLAAAALKPSNGPDAGTGQPVSVGQFNLAQVKQEPVEATSGASQDSTQEHSLDLSK
KDNSNESNGHAVPGNASLLSSLMNKMSQVNPALFNAMHLKTELEAGHAGETPEAAQYLSQ
VLKRPLAEKPSEIWRTYLRRFDTDDFCESHCDFLQKVHFHCLVEDCGALFSTVDGAIKHA
NFHLRATLKVKSEPPFSEGKVSGDGGPLRPAAPVSMANNPSMEMAHLPSSGGYSSPPPSL
LAWKQLTGSIPQMPASMPNLPANSPLATTSLENAKPQVKPGFLQFQENDPCLATDCKYSN
KFHFHCLFGNCKYVCKTSGKAESHCLDHINPNNNLVNVRDQFSYYSLQCLCPNQHCEFRM
RGHYHCLRPGCYFVTNITTKLPWHIKKHEKAERRAANGFKYFTKREECGRLGCKYNQVNS
HFHCIREGCQFSFLLKHQMTSHARKHMRRMLGKNFDRVPSQVMSLSQRMDDMHHGSNMAS
AAMAAHSDINSSYSSATIEEAEDYVDYMGGGGSPLGISSESSNQDRSCTSTPVGNDGSPA
GQGCPTTTTTTTSAPTTPADTSQNAPPSSPPPAPLPPPPLPPPPSVPQAGLPPQATSLSP
ALLRPPLPSLPYLLSPSCLSYSLLSASLGATLSVVMPTNTPAYSPIIATPSPVKNDVPIV
QDAAGNTISIPTAAGAKKRFWIIEDMSPFGKRRKTASSRKMLDEGMMLEGFRRYDLYENC
KDSGCQFSLKVTHYHCTRENCGYKFCGRTHMYKHAQHHDRVDNLVLDDFKRFKSTLSCNF
LDCQFSGNSTHFHCLRCGFRCTDSTKVTAHRKHHGKQDVISAAGFCQFSSSVDCEVPDCK
YKLKCSHFHCTFPECKHTVVGMSQMDSHKRKHEKQERGELPSVSPKPEMMHHLASSTAPP
ASVALNASRGLSRPINSTATPCTLYSSGGSEYNHSYPPSSISLDGSLNLGTDASSSLFFL
KNATGLGLNNSLDLSKKLHRETGRHTHGYNPPLRMLAAQDDTTGTSGEAEDDLSPEEEAR
VEDEEDEEEEDDDDDDDAEEALNTDSNDDSAAEPDEEKDNVESYDTSVNHTDISQLEKQD
GDP
NT seq
6132 nt
NT seq
+upstream
nt +downstream
nt
atggaccatgtggtgatgtgtgttttggttgtgggaagaagctggagtccccgaagaaaa
cccatgcatgcacaggggagaacatccaaactccacacagctgaaaggagtttatgcact
gaatcgacctcaggaaaacccaagatggccgccaaaaggaaaggtggcctaaaactcaat
gctatctgtgccaagctgagccgccaggtggtgttcgacagcaactcccaaaatgcggag
ggagaccagagcgtggctgaaaacagcgagcgcggcagttcccactatgatgacaacgag
accaacttccgcgagagcctgagcttgagtcagagcctggaagaggaccagaaaagacgt
gaggccatcgagaagtgggtgaacggcgagtacggtgacgagccgctgacagctgagggc
ggagacgagcaggagcacgagctccaagatgctgacgatgaaaacgcccctcccgaaggt
gtctacatggtacagcccaaaggttgcagcgatgaggaggacaacaacggtgaggaggcg
gagcccgtggttgggtctcaggatggcagttaccacgacgacaaagatgctgaggacggg
cctcccaagcctgacgcctacatgccaacgagcgaggcccccagtcgccaagcacctttc
tcctctccaggagaagcgtctgccctccgagactatgcggccaacacaatgaacgaattt
ttgggaatgtttggctacgacgaccatcatatgcgggatgagctaaacaagaagctcagc
tttgagaagctcaaggccgctacctcagactcctcatcccttagcagcgaagaggcctct
cggcgagcccgcttctcgaagtatgaagagtacattcgaaagttaaaagctggtgagacc
ctaccttggcccatacatgcttccccaccaaaaccagatgacctcaactcaaaactctcc
caagacaaaagccctaccatgctccagacctccgggggcatcccagcagctgaggctcag
atctaccccactagctcggatcacaagcagcaaggaggagctcccctggctggcgcacag
ccatctaatccctctcacctgcagaacatggcctcccgggcctccaagtatgacttctac
attcagaaacttaaaatgggtgagagtatacagcccaatggtaacgcttttaaacgcccc
tccaaatatgatctagaaaatgtcaaattcctgaatctttttaaaccgggtgacggcaac
cctgacatgggtggggccatagcctttaagactggtaaaggcggtcgcccttccaaatat
gacattagaacaatccagaaactcgtgccgggaaatcccgaagcctcgctgatgcccaac
atcctcgcaaccgcaccggggaaccctggagctccaggtgtccccaccattggtgcggct
ggctccagcattgcaccaggactcaccgtggaccagacgggccatctaaatttcaccaca
tctgactacttaaagtccaccttctccaagactgactccatcaccactggcactgtgtcg
tccgtgaagaatggcctgccaccagataaacctgccagcgacgacgtcaacctctaccag
aaatacatcgccaggttttctggaagtcaacactgtggccacgtgcactgtgcctaccag
tacagggagcactaccactgcatggaccctgagtgtaactaccaggtgagcaggtttacc
agtaagcaggatgtgattcgccactacaacatgcacaagaagagggataactccctgcag
cacggatttatgcgcttcagccctctggatgactgcagcgtctactaccacggctgccat
ctcaatggcaaaagtacacattaccactgcatgcaggtgggctgtagcaaggtgtacacc
agtacctcagatgtcatgacccatgaaaatttccacaaaaagaacgcccagctgatcaac
gatggtttccagaggttccgtgcaactgaggactgcggcacagtcgggtgccaattttat
ggccagaaaacgacgcacttccactgcaggcgtcccggctgtacgttcactttcaagaac
aagtgtgatatcgagaagcacaagagctaccacatcaaggatgacgcctatgccaaagat
ggcttcaagaagttctacaagtatgaggagtgcaagtatgagggctgcgtgtacagcaaa
gctaccaaccacttccactgcatccgctcgggctgcgggttcaccttcacttccaccagc
cagatgacctcccacaagcgcaagcacgagcgccggcacattcgctcctctggcgtcatg
ggtctctcttccactttcctggccccaaaagatgaaccggaggaatccagcaacgatgac
ctgatggatttctcggccatcagtagcaagaactcgagtctgagtgcctcgcccaccacc
caacagtccagcactgtatcccacctcatggccacacccacgactgctgtctcctcctcc
tcgtcagtgggcctcaccctcaagcctacgacctcgctgcccagtgtgggccagcgtatg
gccagcctcctgtcccaggccctgccgagcaacatgccggtggctctctctctgtccaac
agcaccatggctgcttccagccccttctacccactcctacccaggttgcctctccagcct
cctccacatgctgccggcctgttatcagcagtctcatccggggcccattccatgcctacc
gactcgctgacccaaggctgttctacaccgggggcggatggagccatggcttctaccccg
tcctccttctccggctcctcgatcatggagaagatctcagctagcaaaggtctgatatca
cccatgatggccaggctggctgctgctgctctgaagccttccaacggaccagatgcaggg
actgggcaaccggtctcagtcggccagtttaatttggctcaagtgaaacaggaaccagtg
gaagccacgtcaggggcctcacaggactccacgcaggaacacagtttggacctgagcaag
aaagacaacagtaatgaatcaaatggacatgctgtaccggggaatgcatctcttttatcc
tcgcttatgaataagatgtcacaggtgaaccctgcgctcttcaacgccatgcacctgaaa
acggagctggaggccggccatgccggcgaaaccccggaggcagcccagtacctgagccaa
gttctgaagaggcccctggcagagaaacccagcgagatctggaggacgtacctccgcagg
tttgacacagatgacttttgtgagtctcactgtgacttcctccaaaaagtgcactttcac
tgtctggttgaggattgtggtgctctcttcagtactgtggacggagccataaaacatgca
aacttccatctccgagccactctgaaagtaaagtcagagcccccgttcagcgagggcaaa
gtgtccggcgatggtggtcctctgcggcccgctgcccccgtctccatggccaacaacccc
tccatggaaatggcgcacctcccctcctctggtggctacagctcccctcctccctccctg
ctggcctggaagcagctcaccggcagcatcccgcagatgccggcctccatgcccaacctg
ccggccaactccccgctggccaccacctcgttggagaatgcgaagcctcaagtcaaacct
ggatttctgcagttccaggaaaatgatccctgtttagcaacagactgcaagtactcaaac
aagtttcacttccactgcttgttcggcaattgcaagtacgtgtgcaagacctctggcaag
gccgagtcccactgtttggaccacatcaaccccaacaacaacctggtcaacgtccgtgac
cagttttcctactactcccttcagtgtctgtgccccaaccagcactgtgagttccggatg
cggggccactaccactgtctgcggcccggctgctactttgtcaccaacatcaccaccaag
ctgccgtggcacatcaagaagcacgagaaggccgagcgccgcgccgccaatggcttcaaa
tatttcaccaagagggaggagtgcgggcggctgggttgtaaatataaccaagtcaacagc
cattttcactgcatccgcgagggctgccagttctccttcctgctcaagcaccagatgacc
tcacatgcacgcaaacacatgaggcggatgctggggaagaacttcgatcgcgtcccatcg
caggtgatgtcactcagccagaggatggatgacatgcatcatggctctaacatggcgtcg
gcagccatggcagcccactcagatatcaattccagctactcctccgccaccatagaggag
gctgaagattatgtggactacatgggaggcggtggcagccccttgggcatctcctccgag
tcctccaatcaagaccgcagctgcaccagcacccctgtgggcaacgatggctccccggca
ggacaaggctgccccaccaccaccaccaccaccacctctgctcccaccacccctgctgac
actagccaaaatgctcctccttcctcacctcctcctgctcctcttccaccgccgccactt
ccacctcctccttccgtccctcaagctggcctgccgccccaggctacgtccctgtctccc
gctctcctccgaccacccctgccctcactcccatacctcctctctccatcctgtctctca
tactctctgctcagcgcctctctgggagccactctgagtgttgtcatgccaaccaacaca
ccagcttacagccccatcattgccactccgtcgccggttaaaaatgacgtccctatagtg
caggacgctgcaggaaacaccatctctatccccaccgccgccggcgcaaagaagcgcttc
tggatcatcgaggacatgtccccgttcggcaagcgccgcaagaccgcgtcctcgcgcaag
atgctggacgaagggatgatgctggagggcttccggcgctacgacctgtacgagaactgc
aaggactctggctgccagttctccctgaaggtgacccactaccactgcacccgtgagaac
tgtggctacaagttttgcggccgcacccacatgtacaagcacgcccagcaccacgaccgc
gtggacaacctggtcctggacgacttcaagaggttcaagtccacgctgagctgcaacttc
ctcgattgccagttctcgggcaatagcacccacttccactgcctgcgctgcggcttccgc
tgcactgacagcactaaggtgacggcccaccgcaagcaccacggcaagcaggacgtgatc
agcgccgccggcttctgtcagttcagctccagcgtcgactgcgaggttccagactgcaag
tacaagctcaagtgctctcacttccactgcacctttcctgaatgtaagcacacggtggtg
gggatgtcccagatggactcccacaaacgcaagcacgagaagcaggaacggggcgagctg
ccgtccgtgtcacccaaaccggaaatgatgcaccacctggcctcctccacggcgcctcca
gcctccgtggctctaaatgcatcccgtggactgagccgccccatcaacagcaccgccacc
ccctgcacgctctactcgagcggcgggtcagagtacaaccactcgtacccgccgtcctcc
atcagcctggatggctccctcaacctgggcacagacgccagcagctccctgttcttcctc
aagaacgccaccggtctgggtctcaacaactctttggacctgagcaagaagctccaccgg
gagacggggcgacacacacacggctacaacccgccactgcgcatgctggcagctcaggac
gacaccaccggaacgtccggggaggccgaagacgacctgtcgcctgaggaggaggcgcgg
gttgaggacgaagaggacgaagaggaggaggatgacgacgacgacgatgatgcggaagaa
gccctcaacactgactcaaacgatgattcagcggcagagcccgacgaggagaaggacaac
gtggagagttatgatacttccgttaaccacactgacatttcccaactggaaaaacaagat
ggcgacccgtga
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integrated database retrieval system
