Syngnathoides biaculeatus (alligator pipefish): 133508287
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Entry
133508287 CDS
T09681
Symbol
g3bp1
Name
(RefSeq) ras GTPase-activating protein-binding protein 1 isoform X1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
133508287 (g3bp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133508287 (g3bp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133508287 (g3bp1)
Enzymes [BR:
sbia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
133508287 (g3bp1)
5.6.2.5 RNA 5'-3' helicase
133508287 (g3bp1)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
133508287 (g3bp1)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133508287 (g3bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
133508287
NCBI-ProteinID:
XP_061690056
LinkDB
All DBs
Position
11:complement(30788670..30797571)
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AA seq
491 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDTSGKPLEAVYGQSD
IHKRVMALSFRDCHTKIRHVDAHATLNEGVVVQVMGELSNNMQPMRKFMQTFVLAPEGTV
PNKFYVHNDVFRYQDEVFADSDSEPPEESDEEAEELEERVASPDAIADESVPAFYQPASI
PESSHPADEDEAAAAAGPEPEPEAEKEAEVVVAAAEAKPAAAPETQSDARSANEQSDKNA
AAEAAEMATAAPEENRAFSWASVTSKNLPPSGAIPVSGISPHVIKVPPGPPQARVDAKSE
SQSASQRPPQRDPRPREQRPGAPPAVYRGRPVHEGEQGEVEVRRTVRYPDAHQLFVGNVP
HDVDKSELKEFFEQYGTVLELRINSGGKLPNFGFVVFDNSDPVQKILGSRPIKLRGEVRL
NVEEKKTRLAREGERRDVRPRGPGGPGGPRERVGGPRGPPGVSRGGAAQKPSFGSGRGAA
PGEGRYSAQRP
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtgcccagctggtcgggcgagagtttgtccgacagtactac
acgctgctcaaccaggcgcccgactacctgcacaggttctacgggaagaactcgtcgtac
gtccacggggggctggacacgagcggcaagcccctggaggccgtctacggacagtcggac
attcacaagcgcgtgatggcgctgagcttccgcgactgccacaccaagatccgccacgtg
gacgcgcacgccaccctgaacgagggcgtggtggtccaggtcatgggcgagctctccaac
aacatgcagcccatgaggaagttcatgcagaccttcgtcctcgccccggagggaacggtg
cccaacaagttctacgtccacaacgacgtctttcgctaccaggatgaagtctttgccgat
tcggactctgagccacctgaagagtccgatgaggaggcggaagagctggaggagcgagtg
gcctctccggacgccatcgccgacgagtcggtacctgctttttaccaacctgcatccatt
cccgaatcatctcaccccgccgacgaggacgaagcggcagccgccgccggtccggagccg
gaacccgaagcggagaaggaagcggaggtcgtcgtcgccgcggcggaggccaaacccgcc
gccgctccggagacgcaaagtgacgcgcgctcggccaacgagcagtcggataagaatgct
gccgcagaagctgctgaaatggcgaccgccgcaccggaggagaaccgggcgttctcgtgg
gcgtctgtgaccagtaagaacctcccgcccagcggggccatccccgtgtcaggaatctcg
ccgcacgtcatcaaagtcccccccgggccaccgcaggcgcgcgtggacgcgaagtccgag
tctcagtcggcatcgcagagacctccgcagcgggacccccgaccccgagagcagcgaccg
ggcgcccctcccgccgtgtaccgaggacgccccgttcacgagggcgagcagggcgaggtg
gaagtccggcggacggtgcgttaccccgacgcccatcagctgtttgtcggcaacgtaccg
cacgacgtggacaaaagcgagctcaaggagttctttgagcagtacgggacggttctggag
ctgcggatcaacagcggaggaaaacttcccaactttggcttcgtggtgttcgacaactcc
gatccggtccagaagatcctcgggagccggcccatcaagctgcgcggcgaagtgcgtctc
aacgtggaggagaagaagacgcgcctggcccgggaaggcgagcggcgggacgtgcggccc
cgtgggcccggaggacccggaggtcctcgggagcgcgtcggcggtcccaggggccccccc
ggcgtgtcccgcgggggagccgcccagaagcccagcttcggttccgggcgcggcgccgca
cccggcgagggccgctactcggcgcagcgcccgtga
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