Syngnathoides biaculeatus (alligator pipefish): 133508364
Help
Entry
133508364 CDS
T09681
Name
(RefSeq) synaptopodin 2-like protein
KO
K21112
synaptopodin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133508364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
133508364
NCBI-ProteinID:
XP_061690271
LinkDB
All DBs
Position
11:complement(22981567..23026209)
Genome browser
AA seq
1148 aa
AA seq
DB search
MEKGHTSLCRGMSWSPRGLTKPIQAAQASSVEECNATHETTGLNTDQTGSKTNLTRSVSL
SEKELKEARLRSHIIAAQLTVPSSSSSRGVQLFNRRKQRVSAFTLESSGGQSKEDIIRNV
KPNLSCSKPTWADRSREEKERDLNDNNCTSSPLFVPPGRIKATGDSMEEQSDLYSKEDVT
EHSVIQERHFLPVKEIDEEEEEKDTVHKELEDKFKDELPPERENTNPVAMSLIESETSVN
RGHMVPSPLEKIPNGCHGPLMISVSTSKQTTIINRTARPFFSPVTVQSQEANSPVMDSLP
TCSAFTAPQPVAVSSPPPPTYPTPPLPAFPNKPLTTDYFSSTVTSPTFPPPLPTCAVSHN
PASPLPQYGPPTTSKPSTFLPQPFVERKSTPPIKTGLLDDSATKRQNKKSMFTFKEKKVV
PPNPELLSLVQGVDEKKKHRQRSVPEPTSEEELLALGAEASNFLAKEEYRTEEAKAPEWA
SCLKSSRTYPRVEHKPEQTLNDATGKGAELFAKRRSRMEKYVVENQNAGHHIRAPSPTMS
LPPSWVYPSNMPGRVKAIAKNSDMCAQLAQNMKAQQTAKPKPRQTAPAAQAQETPALENG
CSKIEMDLSRHRPYQLNSSLFILKPVKDPLSTLPKGAPQSKNQMPPQDPQSFSRQTSLPN
SASLFRTQYQSPQLPLSSITRVEYPSSPALGQASTTVTPTCVSSSRPGIQAPRPRFSAKQ
AGIEAQKPESSAIKPPSETQLGLTRKFSSPDCLASTTWTSGFQTKYPSANISSRSVTSPV
SFSRVARCQSPMGNQNIQLSAVSSASITSPPQSSTSTSQCTPPWGSRSHSPLVSQNIPSS
THSSGHDFRFQTSNSSRSLPWSSRCQSPVVNLQSSNASQISSKGSTNTSPLSPPWGSKSQ
SPIVSTSTEHSSLFSRSSSRPFQTSTTVPHRSPPWSPRCQSPVVIQTVHPSTSSSSKLSK
TSTITSPVSPLCGSRSQSPALSHSSLSFPSAHRLSISSASSPVPLPRDSRCMSPNNNNFD
SKANHRMLAKNIINAAKRKNSPSPGALSGHSLPISPVGYSPYGYDCQKFQSQPLGGLSPT
FTSPSQTPTDRICSPVRLYNTRSLTDSDASIESEDSGLRSPGTHSYNTCPRVWGGSLRVK
KSTISTDL
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggacacacgtctttgtgtagaggaatgagttggagtccaagaggattgaca
aaacccatccaggcagcacaagccagctcggtggaagagtgcaacgcaacacatgaaacc
actggactcaacacggaccagacgggcagcaaaacaaatctgaccaggagtgtcagctta
tctgagaaggagctaaaggaggcccgcctgaggagtcacatcattgctgctcagctcact
gtcccttccagctccagttccagaggcgtgcaactcttcaaccggcgcaagcagagggtc
agcgcctttacactggaaagtagtggagggcaatcaaaagaggacataatcaggaatgtg
aaacccaacctgtcatgtagcaaaccaacatgggcagacagaagtcgtgaggaaaaggaa
agagacttgaatgataacaattgcacttccagtccactatttgtgcctcctgggcggata
aaagcaacaggtgatagcatggaggaacaaagtgacctttacagcaaagaagatgtcact
gagcacagtgttatccaagaaagacatttccttcctgtaaaggaaatagatgaggaagag
gaggaaaaggatacagtgcacaaagaacttgaagacaaattcaaggatgagcttccacct
gagagagaaaacactaatccagttgcgatgagtcttatcgagagtgagacatcggtaaat
agaggtcatatggtaccatctccccttgaaaagattcctaacggctgccatggacctctg
atgatttctgtgtctacttcgaagcagaccaccatcatcaatcggactgccaggcctttt
ttctcaccagtgacagtgcagtctcaagaggcaaacagtcctgtcatggacagcctgcct
acttgttctgcattcactgctccccagccagttgcagtatcatctccgcctcctccaaca
tatcccacacctcccctaccggcgtttccaaacaagcctctaactactgattacttcagt
tcaactgttacatctcccactttccctccaccactccctacctgtgctgtatctcacaat
cctgcctcacccctaccccaatatggacccccaacaacctcaaagccttctaccttcctt
cctcagccttttgtggaaaggaagtcgacgccaccaataaaaacaggattacttgacgat
agtgctaccaaacgacaaaataaaaagtcgatgttcacgttcaaagagaagaaggttgtg
cctccaaaccctgagctgctttctctagtgcaaggggtggatgaaaagaagaaacatagg
caaagatcggtgcctgaacccacgtctgaggaggagttactagctctgggtgcagaggca
tccaacttccttgccaaagaggaatacaggactgaagaagccaaagctcccgaatgggcc
tcttgtcttaaaagctcaagaacctatccaagggtagaacataagccagaacagaccctc
aatgatgcaacaggaaagggcgcagagctttttgccaagcgcagatccagaatggagaaa
tatgtagttgagaatcagaatgcaggtcaccacataagagctccttctccaacaatgtct
ttgccaccatcttgggtttacccatcaaatatgccaggtagggtcaaagctattgctaaa
aactctgacatgtgtgctcaacttgcacaaaacatgaaagcccaacaaactgccaagcca
aaaccaagacaaacagccccagcagcacaagctcaagagacacctgctcttgagaatggt
tgctccaaaatagagatggacctgtcaagacaccgaccttaccagcttaactcatccctc
tttatacttaagccagtcaaagacccgttgagtaccctaccaaaaggagcaccacagtca
aagaaccagatgcctcctcaggaccctcagtctttttcaagacagacttccttacctaat
agtgcatctctctttcgcacccaatatcaatctcctcagcttcctctcagctccatcaca
agagtagagtatccatcgagtccagctcttggtcaggcatcaactactgttactccaacc
tgtgtgtcatcttctcggccggggattcaagcaccgaggccaagattttctgccaagcaa
gctgggattgaagcgcagaaaccagagtcatccgcgatcaaacctccaagtgagacgcag
ctgggccttacaaggaagttcagcagccccgactgccttgcgagtaccacgtggacatcg
ggttttcaaactaagtacccttctgcaaacatctccagccggtcagtcacatcaccagtt
tctttttcaagggttgcaagatgccaatctccaatgggcaaccaaaatatccagctttca
gcagtttcctcagcttccataactagcccgccccagtcctctacgtctacatctcaatgc
accccgccttggggttcaagatcccactccccactggtatcccagaatatcccatcatct
acacattcctctggtcatgatttcagattccaaacatctaattcctctcgttcgctacca
tggagttcaagatgccagtccccagtagtcaacctacaatcttcaaatgcttcacaaatt
tcatctaaagggtccacaaacacttccccactctctccaccttggggatcaaaatcccaa
tctcccatagtgagcacaagtactgagcattccagcctcttctcacgttcttcttctaga
ccttttcaaacatccacaactgtacctcaccgttctcctccatggagtccaaggtgtcaa
tcaccagtggtaatccagactgtccatccttccactagttcctcttccaaactttccaaa
acatcaacaatcacttctcctgtctcgccactttgtggctcacgttcacagtctcctgca
ctttctcattctagtttatcgttcccctctgctcaccgtctgtccatatcctctgcctcc
tctcctgttccgttacccagggacagtcgctgcatgtccccaaacaataataattttgac
tcaaaagccaatcatcgaatgttggcaaagaacatcatcaatgcagccaaacgtaaaaac
agcccctctccaggtgcactgagcggtcacagcttacctatctcaccagtgggatattcc
ccctatggctatgactgccaaaaattccagtcgcaacccctgggggggctgtcaccgacc
tttaccagtccttctcagaccccaacagaccggatctgctcgcccgtaaggctctacaac
acacgctccctgactgactctgatgcgtccattgagtccgaggactcaggcctgcggtca
cccggcacgcactcttacaacacttgtccccgtgtttggggtggcagtttgagggtgaag
aaaagcacaatctctactgacctgtga
DBGET
integrated database retrieval system
